RNA–Protein interactions for RNA: ENST00000529310.5

PCDHA6-203, Transcript of protocadherin alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA6, Length 5,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-203ENST00000529310 RNFT1Q5M7Z0 435 aa13.55□□□□□ -0.24
PCDHA6-203ENST00000529310 LINC00518Q8N0U6 118 aa13.55□□□□□ -0.24
PCDHA6-203ENST00000529310 APCDD1LQ8NCL9 501 aa13.55□□□□□ -0.24
PCDHA6-203ENST00000529310 TMEM70Q9BUB7 260 aa13.55□□□□□ -0.24
PCDHA6-203ENST00000529310 ZNF430Q9H8G1 570 aaPredicted RBP13.55□□□□□ -0.24
PCDHA6-203ENST00000529310 SCN1AP35498 2009 aa13.55□□□□□ -0.24
PCDHA6-203ENST00000529310 PCM1Q15154 2024 aa13.55□□□□□ -0.24
PCDHA6-203ENST00000529310 FAM90A26D6RGX4 464 aa13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 HOXD4P09016 255 aaPredicted RBP13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 EBLN2Q6P2I7 272 aa13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 EAF1Q96JC9 268 aaPredicted RBP13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 DDA1Q9BW61 102 aa13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 QTRT1Q9BXR0 403 aaKnown RBP13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 TRBV5-7A0A0A0MS05 114 aa13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 H2BFSP57053 126 aa13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 OR11H4Q8NGC9 324 aa13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 GUCD1Q96NT3 240 aa13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 LNP1A1A4G5 178 aa13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 EIF3GO75821 320 aaKnown RBP eCLIP13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 SRIP30626 198 aa13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 FXYD3Q14802 87 aa13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 TMEM177Q53S58 311 aa13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 SYT8Q8NBV8 401 aa13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 OR52M1Q8NGK5 317 aa13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 KCNK17Q96T54 332 aa13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 MAP1LC3AQ9H492 121 aa13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 GFRA3O60609 400 aa13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 OTX1P32242 354 aaPredicted RBP13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 RPS11P62280 158 aaKnown RBP eCLIP13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 IGHV3-72A0A0B4J1Y9 119 aa13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 SS18L1O75177 396 aaPredicted RBP13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 NUDT3O95989 172 aa13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 IGHV4-34P06331 123 aa13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 NUBP1P53384 320 aa13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 LPAR2Q9HBW0 351 aa13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 METTL1Q9UBP6 276 aaKnown RBP13.54□□□□□ -0.24
PCDHA6-203ENST00000529310 IGLV1-36A0A0B4J1U3 117 aa13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 HLA-DRB1P01911 266 aa13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 TAS2R60P59551 318 aa13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 NHLRC3Q5JS37 347 aa13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 MMD2Q8IY49 270 aa13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 OR8G5Q8NG78 346 aa13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 DIRC2Q96SL1 478 aa13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 AKIRIN1Q9H9L7 192 aaPredicted RBP13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 DMRT1Q9Y5R6 373 aa13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 WDR90Q96KV7 1748 aa13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 LMX1BO60663 402 aa13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 SP9P0CG40 484 aa13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 RND2P52198 227 aa13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 FAM53AQ6NSI3 398 aaPredicted RBP13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 SLC25A47Q6Q0C1 308 aa13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 ZFP36L2P47974 494 aaKnown RBP13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 HERPUD1Q15011 391 aa13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 PARLQ9H300 379 aa13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 TSPAN2O60636 221 aa13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 DANCRP0C864 163 aa13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 TM4SF20Q53R12 229 aa13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 PRR7Q8TB68 274 aa13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 METTL26Q96S19 204 aa13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 C5orf66Q9H5L9 145 aa13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 SF3B6Q9Y3B4 125 aaKnown RBP13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 HILPDAQ9Y5L2 63 aa13.53□□□□□ -0.24
PCDHA6-203ENST00000529310 TRGC1P0CF51 173 aa13.52□□□□□ -0.24
PCDHA6-203ENST00000529310 GPR6P46095 362 aaPredicted RBP13.52□□□□□ -0.24
PCDHA6-203ENST00000529310 STPG3Q8N7X2 389 aa13.52□□□□□ -0.24
PCDHA6-203ENST00000529310 SPSB4Q96A44 273 aa13.52□□□□□ -0.24
PCDHA6-203ENST00000529310 SH3BGRL3Q9H299 93 aa13.52□□□□□ -0.24
PCDHA6-203ENST00000529310 DNAJC4Q9NNZ3 241 aa13.52□□□□□ -0.24
PCDHA6-203ENST00000529310 GCM2O75603 506 aaPredicted RBP13.52□□□□□ -0.24
PCDHA6-203ENST00000529310 ARL14EPLP0DKL9 152 aa13.52□□□□□ -0.24
PCDHA6-203ENST00000529310 C8orf88P0DMB2 117 aa13.52□□□□□ -0.24
PCDHA6-203ENST00000529310 ID4P47928 161 aa13.52□□□□□ -0.24
PCDHA6-203ENST00000529310 FUT5Q11128 374 aa13.52□□□□□ -0.24
PCDHA6-203ENST00000529310 PRSS8Q16651 343 aa13.52□□□□□ -0.24
PCDHA6-203ENST00000529310 FGF11Q92914 225 aa13.52□□□□□ -0.24
PCDHA6-203ENST00000529310 CBLN4Q9NTU7 201 aa13.52□□□□□ -0.24
PCDHA6-203ENST00000529310 B4E171 279 aa13.52□□□□□ -0.25
PCDHA6-203ENST00000529310 RBFOX2O43251 390 aaKnown RBP eCLIP13.52□□□□□ -0.25
PCDHA6-203ENST00000529310 TSPAN7P41732 249 aa13.52□□□□□ -0.25
PCDHA6-203ENST00000529310 ZNF501Q96CX3 271 aaPredicted RBP13.52□□□□□ -0.25
PCDHA6-203ENST00000529310 IGKV1-8A0A0C4DH67 115 aa13.52□□□□□ -0.25
PCDHA6-203ENST00000529310 PRSS2P07478 247 aa13.52□□□□□ -0.25
PCDHA6-203ENST00000529310 TFPI2P48307 235 aa13.52□□□□□ -0.25
PCDHA6-203ENST00000529310 RPS20P60866 119 aaKnown RBP13.52□□□□□ -0.25
PCDHA6-203ENST00000529310 TNFRSF9Q07011 255 aa13.52□□□□□ -0.25
PCDHA6-203ENST00000529310 TMEM56-RWDD3S4R434 201 aa13.52□□□□□ -0.25
PCDHA6-203ENST00000529310 A0A1W2PS18 150 aa13.51□□□□□ -0.25
PCDHA6-203ENST00000529310 PIN1P1O15428 100 aa13.51□□□□□ -0.25
PCDHA6-203ENST00000529310 FTH1P19P0C7X4 201 aa13.51□□□□□ -0.25
PCDHA6-203ENST00000529310 OR10AG1Q8NH19 301 aa13.51□□□□□ -0.25
PCDHA6-203ENST00000529310 HIST1H2BAQ96A08 127 aa13.51□□□□□ -0.25
PCDHA6-203ENST00000529310 KCNE5Q9UJ90 142 aa13.51□□□□□ -0.25
PCDHA6-203ENST00000529310 CGB1A6NKQ9 187 aa13.51□□□□□ -0.25
PCDHA6-203ENST00000529310 FOXL2P58012 376 aa13.51□□□□□ -0.25
PCDHA6-203ENST00000529310 HSPE1P61604 102 aaKnown RBP13.51□□□□□ -0.25
PCDHA6-203ENST00000529310 KIAA1644Q3SXP7 199 aa13.51□□□□□ -0.25
PCDHA6-203ENST00000529310 KIAA1217Q5T5P2 1943 aa13.51□□□□□ -0.25
PCDHA6-203ENST00000529310 MPTX1A8MV57 137 aa13.51□□□□□ -0.25
PCDHA6-203ENST00000529310 CRYBB3P26998 211 aa13.51□□□□□ -0.25
PCDHA6-203ENST00000529310 GLIPR1P48060 266 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms