RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 RDH8Q9NYR8 311 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 HSF4Q9ULV5 492 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 A0A075B6Q4 140 aa10.03□□□□□ -0.8
CPSF1-204ENST00000529288 ANKRD34BA5PLL1 514 aa10.03□□□□□ -0.8
CPSF1-204ENST00000529288 ITGB1BP1O14713 200 aa10.03□□□□□ -0.8
CPSF1-204ENST00000529288 IGKV1-16P04430 117 aa10.03□□□□□ -0.8
CPSF1-204ENST00000529288 CRIP2P52943 208 aaPredicted RBP10.03□□□□□ -0.8
CPSF1-204ENST00000529288 TRAM1Q15629 374 aa10.03□□□□□ -0.8
CPSF1-204ENST00000529288 TBCEQ15813 527 aaPredicted RBP10.03□□□□□ -0.8
CPSF1-204ENST00000529288 AKIRIN2Q53H80 203 aa10.03□□□□□ -0.8
CPSF1-204ENST00000529288 CD200R1LQ6Q8B3 271 aa10.03□□□□□ -0.8
CPSF1-204ENST00000529288 SBSPONQ8IVN8 264 aa10.03□□□□□ -0.8
CPSF1-204ENST00000529288 OR56B1Q8NGI3 324 aa10.03□□□□□ -0.8
CPSF1-204ENST00000529288 SLC35D1Q9NTN3 355 aa10.03□□□□□ -0.8
CPSF1-204ENST00000529288 RBM7Q9Y580 266 aaKnown RBP10.03□□□□□ -0.8
CPSF1-204ENST00000529288 V9GY05 133 aa10.03□□□□□ -0.8
CPSF1-204ENST00000529288 RYR3Q15413 4870 aa10.02□□□□□ -0.81
CPSF1-204ENST00000529288 IGKV1-6A0A0C4DH72 117 aa10.02□□□□□ -0.81
CPSF1-204ENST00000529288 C13orf42A0A1B0GVH6 325 aa10.02□□□□□ -0.81
CPSF1-204ENST00000529288 TRIM64CA6NLI5 447 aa10.02□□□□□ -0.81
CPSF1-204ENST00000529288 PROP1O75360 226 aa10.02□□□□□ -0.81
CPSF1-204ENST00000529288 OR8U9P0C7N5 309 aa10.02□□□□□ -0.81
CPSF1-204ENST00000529288 CD37P11049 281 aa10.02□□□□□ -0.81
CPSF1-204ENST00000529288 FABP5Q01469 135 aa10.02□□□□□ -0.81
CPSF1-204ENST00000529288 MLLT11Q13015 90 aaPredicted RBP10.02□□□□□ -0.81
CPSF1-204ENST00000529288 PLA2G7Q13093 441 aa10.02□□□□□ -0.81
CPSF1-204ENST00000529288 PLAC9Q5JTB6 97 aa10.02□□□□□ -0.81
CPSF1-204ENST00000529288 ACSM6Q6P461 480 aa10.02□□□□□ -0.81
CPSF1-204ENST00000529288 PDPNQ86YL7 162 aa10.02□□□□□ -0.81
CPSF1-204ENST00000529288 MAFIPQ8WZ33 124 aa10.02□□□□□ -0.81
CPSF1-204ENST00000529288 PTX4Q96A99 478 aa10.02□□□□□ -0.81
CPSF1-204ENST00000529288 RHOVQ96L33 236 aa10.02□□□□□ -0.81
CPSF1-204ENST00000529288 ELOVL1Q9BW60 279 aa10.02□□□□□ -0.81
CPSF1-204ENST00000529288 TMEM272A0A1B0GTI8 110 aa10.01□□□□□ -0.81
CPSF1-204ENST00000529288 FOXI3A8MTJ6 420 aaPredicted RBP10.01□□□□□ -0.81
CPSF1-204ENST00000529288 ARPC1BO15143 372 aaKnown RBP10.01□□□□□ -0.81
CPSF1-204ENST00000529288 FABP7O15540 132 aa10.01□□□□□ -0.81
CPSF1-204ENST00000529288 FRMD6-AS1P0C7T7 363 aa10.01□□□□□ -0.81
CPSF1-204ENST00000529288 GSTT2P0CG29 244 aa10.01□□□□□ -0.81
CPSF1-204ENST00000529288 GSTT2BP0CG30 244 aa10.01□□□□□ -0.81
CPSF1-204ENST00000529288 PSMA1P25786 263 aaKnown RBP10.01□□□□□ -0.81
CPSF1-204ENST00000529288 GABARAPL2P60520 117 aa10.01□□□□□ -0.81
CPSF1-204ENST00000529288 DEFA5Q01523 94 aa10.01□□□□□ -0.81
CPSF1-204ENST00000529288 PJVKQ0ZLH3 352 aa10.01□□□□□ -0.81
CPSF1-204ENST00000529288 CBX3Q13185 183 aa10.01□□□□□ -0.81
CPSF1-204ENST00000529288 SSX1Q16384 188 aa10.01□□□□□ -0.81
CPSF1-204ENST00000529288 IGSF11Q5DX21 431 aa10.01□□□□□ -0.81
CPSF1-204ENST00000529288 ANKRD13BQ86YJ7 626 aa10.01□□□□□ -0.81
CPSF1-204ENST00000529288 OR10J5Q8NHC4 309 aa10.01□□□□□ -0.81
CPSF1-204ENST00000529288 RAB3CQ96E17 227 aa10.01□□□□□ -0.81
CPSF1-204ENST00000529288 RCHY1Q96PM5 261 aa10.01□□□□□ -0.81
CPSF1-204ENST00000529288 MGLLQ99685 303 aa10.01□□□□□ -0.81
CPSF1-204ENST00000529288 OR2D2Q9H210 308 aa10.01□□□□□ -0.81
CPSF1-204ENST00000529288 SLA2Q9H6Q3 261 aa10.01□□□□□ -0.81
CPSF1-204ENST00000529288 ACOT13Q9NPJ3 140 aa10.01□□□□□ -0.81
CPSF1-204ENST00000529288 RAB22AQ9UL26 194 aa10.01□□□□□ -0.81
CPSF1-204ENST00000529288 C3orf84H3BNL1 204 aa10□□□□□ -0.81
CPSF1-204ENST00000529288 J3QRK9 145 aa10□□□□□ -0.81
CPSF1-204ENST00000529288 SHOXO15266 292 aa10□□□□□ -0.81
CPSF1-204ENST00000529288 SPDEFO95238 335 aa10□□□□□ -0.81
CPSF1-204ENST00000529288 APELAP0DMC3 54 aa10□□□□□ -0.81
CPSF1-204ENST00000529288 GNB3P16520 340 aa10□□□□□ -0.81
CPSF1-204ENST00000529288 RANBP1P43487 201 aa10□□□□□ -0.81
CPSF1-204ENST00000529288 SERPINB10P48595 397 aa10□□□□□ -0.81
CPSF1-204ENST00000529288 PSMD7P51665 324 aa10□□□□□ -0.81
CPSF1-204ENST00000529288 MOGAT2Q3SYC2 334 aa10□□□□□ -0.81
CPSF1-204ENST00000529288 POC5Q8NA72 575 aa10□□□□□ -0.81
CPSF1-204ENST00000529288 BVESQ8NE79 360 aa10□□□□□ -0.81
CPSF1-204ENST00000529288 OR4A4PQ8NGN8 299 aa10□□□□□ -0.81
CPSF1-204ENST00000529288 HARBI1Q96MB7 349 aa10□□□□□ -0.81
CPSF1-204ENST00000529288 PHB2Q99623 299 aa10□□□□□ -0.81
CPSF1-204ENST00000529288 GINS4Q9BRT9 223 aa10□□□□□ -0.81
CPSF1-204ENST00000529288 ZMAT4Q9H898 229 aa10□□□□□ -0.81
CPSF1-204ENST00000529288 ZNF230Q9UIE0 474 aaPredicted RBP10□□□□□ -0.81
CPSF1-204ENST00000529288 BLOC1S6Q9UL45 172 aa10□□□□□ -0.81
CPSF1-204ENST00000529288 TENM3Q9P273 2699 aa10□□□□□ -0.81
CPSF1-204ENST00000529288 PDCD5O14737 125 aa9.99□□□□□ -0.81
CPSF1-204ENST00000529288 GADD45AP24522 165 aa9.99□□□□□ -0.81
CPSF1-204ENST00000529288 TALDO1P37837 337 aa9.99□□□□□ -0.81
CPSF1-204ENST00000529288 OR10A3P58181 314 aa9.99□□□□□ -0.81
CPSF1-204ENST00000529288 ARFRP1Q13795 201 aa9.99□□□□□ -0.81
CPSF1-204ENST00000529288 ZNF367Q7RTV3 350 aa9.99□□□□□ -0.81
CPSF1-204ENST00000529288 SPARTQ8N0X7 666 aa9.99□□□□□ -0.81
CPSF1-204ENST00000529288 RANGRFQ9HD47 186 aaPredicted RBP9.99□□□□□ -0.81
CPSF1-204ENST00000529288 SDHAF2Q9NX18 166 aa9.99□□□□□ -0.81
CPSF1-204ENST00000529288 COA4Q9NYJ1 87 aa9.99□□□□□ -0.81
CPSF1-204ENST00000529288 STUB1Q9UNE7 303 aa9.99□□□□□ -0.81
CPSF1-204ENST00000529288 A0A0B4J203 849 aa9.98□□□□□ -0.81
CPSF1-204ENST00000529288 A0A0G2JLM5 398 aa9.98□□□□□ -0.81
CPSF1-204ENST00000529288 LDLRAD4O15165 306 aa9.98□□□□□ -0.81
CPSF1-204ENST00000529288 MRPS14O60783 128 aaKnown RBP9.98□□□□□ -0.81
CPSF1-204ENST00000529288 IGLV2-23P01705 113 aa9.98□□□□□ -0.81
CPSF1-204ENST00000529288 FCGR3AP08637 254 aa9.98□□□□□ -0.81
CPSF1-204ENST00000529288 ZP3P21754 424 aa9.98□□□□□ -0.81
CPSF1-204ENST00000529288 MYL9P24844 172 aa9.98□□□□□ -0.81
CPSF1-204ENST00000529288 LGALS7P47929 136 aa9.98□□□□□ -0.81
CPSF1-204ENST00000529288 RTL8BQ17RB0 113 aa9.98□□□□□ -0.81
CPSF1-204ENST00000529288 UBE2UQ5VVX9 321 aa9.98□□□□□ -0.81
CPSF1-204ENST00000529288 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.98□□□□□ -0.81
CPSF1-204ENST00000529288 OR10R2Q8NGX6 335 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms