RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 SNRNP70P08621 437 aaKnown RBP6.7□□□□□ -1.34
SSBP3-212ENST00000528930 VSIG10L2P0DP72 767 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 ARSBP15848 533 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 C4BPBP20851 252 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 GALP22466 123 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 MNDAP41218 407 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 RAB7AP51149 207 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 ARHGDIBP52566 201 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 TMEM50BP56557 158 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 CLDN12P56749 244 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 S100A12P80511 92 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 ZNF816Q0VGE8 651 aaPredicted RBP6.7□□□□□ -1.34
SSBP3-212ENST00000528930 PLA2G7Q13093 441 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 MADCAM1Q13477 382 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 TMEM95Q3KNT9 176 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 C2orf76Q3KRA6 126 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 ZNF880Q6PDB4 577 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 PLET1Q6UQ28 207 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 SLC25A48Q6ZT89 311 aaKnown RBP6.7□□□□□ -1.34
SSBP3-212ENST00000528930 OR2W3Q7Z3T1 314 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 C6orf201Q7Z4U5 140 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 DRAM1Q8N682 238 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 OR51D1Q8NGF3 324 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 OR10X1Q8NGY0 326 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 OR56B4Q8NH76 319 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 RPEQ96AT9 228 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 NEDD4LQ96PU5 975 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 V9GY05 133 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 IGHV1-3A0A0C4DH29 117 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 SH2D7A6NKC9 451 aaPredicted RBP6.69□□□□□ -1.34
SSBP3-212ENST00000528930 HSD17B6O14756 317 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 NAPSAO96009 420 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 IFNA7P01567 189 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 GAPDHP04406 335 aaKnown RBP6.69□□□□□ -1.34
SSBP3-212ENST00000528930 CD28P10747 220 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 BLVRBP30043 206 aaPredicted RBP6.69□□□□□ -1.34
SSBP3-212ENST00000528930 REG1BP48304 166 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 ZNF137PP52743 207 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 OR10A3P58181 314 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 LINC00310P59036 64 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 EBI3Q14213 229 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 HMGN3Q15651 99 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 RAB11BQ15907 218 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 ZNF79Q15937 498 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 TMEM30BQ3MIR4 351 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 MORN2Q502X0 79 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 CT45A1Q5HYN5 189 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 LAMTOR1Q6IAA8 161 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 TRAT1Q6PIZ9 186 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 NR2C2APQ86WQ0 139 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 OR8H3Q8N146 312 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 PRR18Q8N4B5 295 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 C11orf44Q8N8P7 122 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 OR52L2PQ8NGH6 319 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 OR10V1Q8NGI7 309 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 CT45A3Q8NHU0 189 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 SLC25A46Q96AG3 418 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 FAM3DQ96BQ1 224 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 AKR1E2Q96JD6 320 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 URM1Q9BTM9 101 aaKnown RBP6.69□□□□□ -1.34
SSBP3-212ENST00000528930 RANGRFQ9HD47 186 aaPredicted RBP6.69□□□□□ -1.34
SSBP3-212ENST00000528930 RAB9BQ9NP90 201 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 C12orf4Q9NQ89 552 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 PLEKHJ1Q9NW61 149 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 RABL2AQ9UBK7 228 aaPredicted RBP6.69□□□□□ -1.34
SSBP3-212ENST00000528930 ZMAT5Q9UDW3 170 aaKnown RBP6.69□□□□□ -1.34
SSBP3-212ENST00000528930 HSF4Q9ULV5 492 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 RABL2BQ9UNT1 228 aa6.69□□□□□ -1.34
SSBP3-212ENST00000528930 TMA7Q9Y2S6 64 aaKnown RBP6.69□□□□□ -1.34
SSBP3-212ENST00000528930 TRBV6-6A0A0A6YYG2 114 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 TMEM272A0A1B0GTI8 110 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 YPEL1O60688 119 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 IGKV1D-33P01593 117 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 IGKV1-33P01594 117 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 FAM106CPP0CH98 169 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 MED14OSP0DP75 135 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 FGF9P31371 208 aaPredicted RBP6.68□□□□□ -1.34
SSBP3-212ENST00000528930 VDAC2P45880 294 aaPredicted RBP6.68□□□□□ -1.34
SSBP3-212ENST00000528930 VEGFCP49767 419 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 B2MP61769 119 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 RRAS2P62070 204 aaPredicted RBP6.68□□□□□ -1.34
SSBP3-212ENST00000528930 HTD2P86397 168 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 GNMTQ14749 295 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 ABCA11PQ4W5N1 156 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 PLAC9Q5JTB6 97 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 LY6G6FQ5SQ64 297 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 HES5Q5TA89 166 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 MOB3BQ86TA1 216 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 ODF3L1Q8IXM7 274 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 Q8N6K4 173 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 LRRC20Q8TCA0 184 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 RTN4IP1Q8WWV3 396 aaPredicted RBP6.68□□□□□ -1.34
SSBP3-212ENST00000528930 YPEL2Q96QA6 119 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 CENPOQ9BU64 300 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 OR51E2Q9H255 320 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 OR2S2Q9NQN1 319 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 KCNIP1Q9NZI2 227 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 GNG12Q9UBI6 72 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 STEAP1Q9UHE8 339 aa6.68□□□□□ -1.34
SSBP3-212ENST00000528930 AK3Q9UIJ7 227 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms