RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 CYGBQ8WWM9 190 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 FAM3DQ96BQ1 224 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 C12orf43Q96C57 262 aaKnown RBP4.01□□□□□ -1.77
PCF11-202ENST00000528336 C16orf74Q96GX8 76 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 OR2M4Q96R27 311 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 METTL26Q96S19 204 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 GINS3Q9BRX5 216 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 WFDC1Q9HC57 220 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 UBQLN4Q9NRR5 601 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 HEBP1Q9NRV9 189 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 OPTCQ9UBM4 332 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 ZNF629Q9UEG4 869 aaPredicted RBP4.01□□□□□ -1.77
PCF11-202ENST00000528336 ZNF225Q9UK10 706 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 RAI1Q7Z5J4 1906 aaPredicted RBP4.01□□□□□ -1.77
PCF11-202ENST00000528336 KIF26AQ9ULI4 1882 aaPredicted RBP4.01□□□□□ -1.77
PCF11-202ENST00000528336 ZDBF2Q9HCK1 2354 aa4□□□□□ -1.77
PCF11-202ENST00000528336 HELZP42694 1942 aaKnown RBP4□□□□□ -1.77
PCF11-202ENST00000528336 DYSFO75923 2080 aa4□□□□□ -1.77
PCF11-202ENST00000528336 IGHV7-81A0A0B4J1V7 117 aa4□□□□□ -1.77
PCF11-202ENST00000528336 TRAV8-6A0A0B4J262 113 aa4□□□□□ -1.77
PCF11-202ENST00000528336 C8orf87E5RJ46 101 aa4□□□□□ -1.77
PCF11-202ENST00000528336 BET1O15155 118 aa4□□□□□ -1.77
PCF11-202ENST00000528336 TBL1XO60907 577 aa4□□□□□ -1.77
PCF11-202ENST00000528336 PDCD6O75340 191 aa4□□□□□ -1.77
PCF11-202ENST00000528336 SPAG7O75391 227 aa4□□□□□ -1.77
PCF11-202ENST00000528336 ATG12O94817 140 aa4□□□□□ -1.77
PCF11-202ENST00000528336 CISD3P0C7P0 127 aa4□□□□□ -1.77
PCF11-202ENST00000528336 RAB3BP20337 219 aa4□□□□□ -1.77
PCF11-202ENST00000528336 CD70P32970 193 aa4□□□□□ -1.77
PCF11-202ENST00000528336 H2BFSP57053 126 aa4□□□□□ -1.77
PCF11-202ENST00000528336 RPS24P62847 133 aaKnown RBP4□□□□□ -1.77
PCF11-202ENST00000528336 SLC35A2P78381 396 aa4□□□□□ -1.77
PCF11-202ENST00000528336 ZNF45Q02386 682 aa4□□□□□ -1.77
PCF11-202ENST00000528336 TMEM78Q5T7P6 136 aa4□□□□□ -1.77
PCF11-202ENST00000528336 FAM78BQ5VT40 261 aa4□□□□□ -1.77
PCF11-202ENST00000528336 KDM4DQ6B0I6 523 aa4□□□□□ -1.77
PCF11-202ENST00000528336 OPN5Q6U736 354 aa4□□□□□ -1.77
PCF11-202ENST00000528336 DGAT2L6Q6ZPD8 337 aa4□□□□□ -1.77
PCF11-202ENST00000528336 CALHM3Q86XJ0 350 aa4□□□□□ -1.77
PCF11-202ENST00000528336 DOLPP1Q86YN1 238 aa4□□□□□ -1.77
PCF11-202ENST00000528336 SLC35G3Q8N808 338 aa4□□□□□ -1.77
PCF11-202ENST00000528336 OR2M7Q8NG81 312 aa4□□□□□ -1.77
PCF11-202ENST00000528336 OR9G1Q8NH87 305 aa4□□□□□ -1.77
PCF11-202ENST00000528336 CYYR1Q96J86 154 aa4□□□□□ -1.77
PCF11-202ENST00000528336 OR52E6Q96RD3 313 aa4□□□□□ -1.77
PCF11-202ENST00000528336 PEBP4Q96S96 227 aa4□□□□□ -1.77
PCF11-202ENST00000528336 SNRNP25Q9BV90 132 aaKnown RBP4□□□□□ -1.77
PCF11-202ENST00000528336 LRTM1Q9HBL6 345 aa4□□□□□ -1.77
PCF11-202ENST00000528336 SPANXA1Q9NS26 97 aa4□□□□□ -1.77
PCF11-202ENST00000528336 TMEM100Q9NV29 134 aa4□□□□□ -1.77
PCF11-202ENST00000528336 DEC1Q9P2X7 70 aa4□□□□□ -1.77
PCF11-202ENST00000528336 NEU3Q9UQ49 428 aa4□□□□□ -1.77
PCF11-202ENST00000528336 FAM32AQ9Y421 112 aaKnown RBP4□□□□□ -1.77
PCF11-202ENST00000528336 YTHDF2Q9Y5A9 579 aaKnown RBP4□□□□□ -1.77
PCF11-202ENST00000528336 COL4A2P08572 1712 aa4□□□□□ -1.77
PCF11-202ENST00000528336 TECTAO75443 2155 aa4□□□□□ -1.77
PCF11-202ENST00000528336 MYO10Q9HD67 2058 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 TRAV8-2A0A0B4J237 113 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 A0A0J9YXV3 536 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 A0A1W2PNU3 283 aaPredicted RBP3.99□□□□□ -1.77
PCF11-202ENST00000528336 ZNF98A6NK75 572 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 FAM183AA6NL82 134 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 RFPL4AA6NLU0 287 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 RFPL4AL1F8VTS6 287 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 K7EQS6 105 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 MANBAO00462 879 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 BHLHE40O14503 412 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 IGHG2P01859 326 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 APOC1P02654 83 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 TTRP02766 147 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 APODP05090 189 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 REG1AP05451 166 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 SERPINA7P05543 415 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 OR13C7P0DN81 318 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 CD79AP11912 226 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 ELK1P19419 428 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 CXCL3P19876 107 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 PRTN3P24158 256 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 AGTR1P30556 359 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 PRSS3P35030 304 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 RCVRNP35243 200 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 TPI1P60174 286 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 ESRRGP62508 458 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 C16orf72Q14CZ0 275 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 PRR4Q16378 134 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 C2orf83Q53S99 150 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 ZNF684Q5T5D7 378 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 ZCCHC24Q8N2G6 241 aaKnown RBP3.99□□□□□ -1.77
PCF11-202ENST00000528336 UBAC2Q8NBM4 344 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 OR13C6PQ8NH95 151 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 MCFD2Q8NI22 146 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 CCL17Q92583 94 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 TM4SF18Q96CE8 201 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 PYURFQ96I23 114 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 QKIQ96PU8 341 aaKnown RBP eCLIP3.99□□□□□ -1.77
PCF11-202ENST00000528336 TSC22D3Q99576 134 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 ARHGDIGQ99819 225 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 SEC22CQ9BRL7 303 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 Q9H3A6 140 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 ENY2Q9NPA8 101 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms