RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 SDHAF2Q9NX18 166 aa25.81■■□□□ 1.72
SSSCA1-205ENST00000527920 CLEC2LP0C7M8 214 aa25.8■■□□□ 1.72
SSSCA1-205ENST00000527920 PSG5Q15238 335 aa25.8■■□□□ 1.72
SSSCA1-205ENST00000527920 H1FOOQ8IZA3 346 aaPredicted RBP25.8■■□□□ 1.72
SSSCA1-205ENST00000527920 IGKV1D-8A0A087WSZ0 117 aa25.79■■□□□ 1.72
SSSCA1-205ENST00000527920 TNFAIP8O95379 198 aa25.79■■□□□ 1.72
SSSCA1-205ENST00000527920 ZNF260Q3ZCT1 412 aa25.79■■□□□ 1.72
SSSCA1-205ENST00000527920 TMEM65Q6PI78 240 aa25.79■■□□□ 1.72
SSSCA1-205ENST00000527920 FLYWCH2Q96CP2 140 aaKnown RBP25.79■■□□□ 1.72
SSSCA1-205ENST00000527920 UBE2E2Q96LR5 201 aa25.79■■□□□ 1.72
SSSCA1-205ENST00000527920 VCX3AQ9NNX9 186 aa25.79■■□□□ 1.72
SSSCA1-205ENST00000527920 SLC35D1Q9NTN3 355 aa25.79■■□□□ 1.72
SSSCA1-205ENST00000527920 METTL1Q9UBP6 276 aaKnown RBP25.79■■□□□ 1.72
SSSCA1-205ENST00000527920 A0A087WXM4 84 aa25.78■■□□□ 1.72
SSSCA1-205ENST00000527920 TMEM235A6NFC5 223 aa25.78■■□□□ 1.72
SSSCA1-205ENST00000527920 CTXN2P0C2S0 81 aa25.78■■□□□ 1.72
SSSCA1-205ENST00000527920 LINC00205P59089 165 aa25.78■■□□□ 1.72
SSSCA1-205ENST00000527920 EGFEM1PQ0D2K5 195 aa25.78■■□□□ 1.72
SSSCA1-205ENST00000527920 ZNF562Q6V9R5 426 aa25.78■■□□□ 1.72
SSSCA1-205ENST00000527920 A0A0A6YYH2 397 aa25.77■■□□□ 1.72
SSSCA1-205ENST00000527920 A6NJ64 397 aa25.77■■□□□ 1.72
SSSCA1-205ENST00000527920 FCN1O00602 326 aa25.77■■□□□ 1.72
SSSCA1-205ENST00000527920 RPS16P62249 146 aaKnown RBP25.77■■□□□ 1.72
SSSCA1-205ENST00000527920 KIAA0141Q14154 515 aaPredicted RBP25.77■■□□□ 1.72
SSSCA1-205ENST00000527920 SLC25A38Q96DW6 304 aa25.77■■□□□ 1.72
SSSCA1-205ENST00000527920 FBXO7Q9Y3I1 522 aa25.77■■□□□ 1.72
SSSCA1-205ENST00000527920 LGALS7P47929 136 aa25.76■■□□□ 1.71
SSSCA1-205ENST00000527920 GNG2P59768 71 aa25.76■■□□□ 1.71
SSSCA1-205ENST00000527920 RUNX1Q01196 453 aa25.76■■□□□ 1.71
SSSCA1-205ENST00000527920 TMEM267Q0VDI3 215 aaPredicted RBP25.76■■□□□ 1.71
SSSCA1-205ENST00000527920 FHL3Q13643 280 aa25.76■■□□□ 1.71
SSSCA1-205ENST00000527920 TSPAN14Q8NG11 270 aa25.76■■□□□ 1.71
SSSCA1-205ENST00000527920 NUDCD2Q8WVJ2 157 aa25.76■■□□□ 1.71
SSSCA1-205ENST00000527920 DPF1Q92782 380 aa25.76■■□□□ 1.71
SSSCA1-205ENST00000527920 C5orf30Q96GV9 206 aa25.76■■□□□ 1.71
SSSCA1-205ENST00000527920 ST6GALNAC5Q9BVH7 336 aa25.76■■□□□ 1.71
SSSCA1-205ENST00000527920 KLK15Q9H2R5 256 aa25.76■■□□□ 1.71
SSSCA1-205ENST00000527920 FOXA2Q9Y261 457 aaPredicted RBP25.76■■□□□ 1.71
SSSCA1-205ENST00000527920 RBM7Q9Y580 266 aaKnown RBP25.76■■□□□ 1.71
SSSCA1-205ENST00000527920 NUBP2Q9Y5Y2 271 aa25.76■■□□□ 1.71
SSSCA1-205ENST00000527920 DNAH3Q8TD57 4116 aa25.76■■□□□ 1.71
SSSCA1-205ENST00000527920 EGR2P11161 476 aaPredicted RBP25.75■■□□□ 1.71
SSSCA1-205ENST00000527920 IDNKQ5T6J7 187 aa25.75■■□□□ 1.71
SSSCA1-205ENST00000527920 ZNF491Q8N8L2 437 aa25.75■■□□□ 1.71
SSSCA1-205ENST00000527920 MRAPQ8TCY5 172 aa25.75■■□□□ 1.71
SSSCA1-205ENST00000527920 ADTRPQ96IZ2 230 aa25.75■■□□□ 1.71
SSSCA1-205ENST00000527920 DUX3Q96PT4 197 aa25.75■■□□□ 1.71
SSSCA1-205ENST00000527920 RRASP10301 218 aa25.74■■□□□ 1.71
SSSCA1-205ENST00000527920 RAB9AP51151 201 aa25.74■■□□□ 1.71
SSSCA1-205ENST00000527920 DEFB136Q30KP8 78 aa25.74■■□□□ 1.71
SSSCA1-205ENST00000527920 AKIRIN2Q53H80 203 aa25.74■■□□□ 1.71
SSSCA1-205ENST00000527920 CNIH2Q6PI25 160 aa25.74■■□□□ 1.71
SSSCA1-205ENST00000527920 CROCCP3Q8IVE0 287 aa25.74■■□□□ 1.71
SSSCA1-205ENST00000527920 OR5H6Q8NGV6 325 aa25.74■■□□□ 1.71
SSSCA1-205ENST00000527920 VSIG4Q9Y279 399 aa25.74■■□□□ 1.71
SSSCA1-205ENST00000527920 SSX5O60225 188 aa25.73■■□□□ 1.71
SSSCA1-205ENST00000527920 CBX3Q13185 183 aa25.73■■□□□ 1.71
SSSCA1-205ENST00000527920 ECSCRQ19T08 205 aa25.73■■□□□ 1.71
SSSCA1-205ENST00000527920 RTL8BQ17RB0 113 aa25.72■■□□□ 1.71
SSSCA1-205ENST00000527920 TMEM177Q53S58 311 aa25.72■■□□□ 1.71
SSSCA1-205ENST00000527920 PYHIN1Q6K0P9 492 aa25.72■■□□□ 1.71
SSSCA1-205ENST00000527920 PPP1R27Q86WC6 154 aa25.72■■□□□ 1.71
SSSCA1-205ENST00000527920 OR5M8Q8NGP6 311 aa25.72■■□□□ 1.71
SSSCA1-205ENST00000527920 YIPF6Q96EC8 236 aa25.72■■□□□ 1.71
SSSCA1-205ENST00000527920 SPATA2Q9UM82 520 aa25.72■■□□□ 1.71
SSSCA1-205ENST00000527920 OR2W1Q9Y3N9 320 aa25.72■■□□□ 1.71
SSSCA1-205ENST00000527920 I3L521 148 aa25.71■■□□□ 1.71
SSSCA1-205ENST00000527920 SLC25A17O43808 307 aa25.71■■□□□ 1.71
SSSCA1-205ENST00000527920 AIREO43918 545 aa25.71■■□□□ 1.71
SSSCA1-205ENST00000527920 SOX15O60248 233 aa25.71■■□□□ 1.71
SSSCA1-205ENST00000527920 CA2P00918 260 aa25.71■■□□□ 1.71
SSSCA1-205ENST00000527920 IGLV2-23P01705 113 aa25.71■■□□□ 1.71
SSSCA1-205ENST00000527920 DDB2Q92466 427 aa25.71■■□□□ 1.71
SSSCA1-205ENST00000527920 ANXA10Q9UJ72 324 aa25.71■■□□□ 1.71
SSSCA1-205ENST00000527920 A0A1W2PN81 502 aa25.7■■□□□ 1.7
SSSCA1-205ENST00000527920 SLC22A5O76082 557 aa25.7■■□□□ 1.7
SSSCA1-205ENST00000527920 HLA-DQB1P01920 261 aa25.7■■□□□ 1.7
SSSCA1-205ENST00000527920 DUTP33316 252 aaKnown RBP25.7■■□□□ 1.7
SSSCA1-205ENST00000527920 CHRNA7P36544 502 aa25.7■■□□□ 1.7
SSSCA1-205ENST00000527920 KRTAP10-11P60412 298 aa25.7■■□□□ 1.7
SSSCA1-205ENST00000527920 ABHD5Q8WTS1 349 aa25.7■■□□□ 1.7
SSSCA1-205ENST00000527920 HARBI1Q96MB7 349 aa25.7■■□□□ 1.7
SSSCA1-205ENST00000527920 GNB4Q9HAV0 340 aa25.7■■□□□ 1.7
SSSCA1-205ENST00000527920 ZMAT5Q9UDW3 170 aaKnown RBP25.7■■□□□ 1.7
SSSCA1-205ENST00000527920 TRIM64CA6NLI5 447 aa25.69■■□□□ 1.7
SSSCA1-205ENST00000527920 CRYGBP07316 175 aa25.69■■□□□ 1.7
SSSCA1-205ENST00000527920 ZNF645Q8N7E2 425 aa25.69■■□□□ 1.7
SSSCA1-205ENST00000527920 ARPC1AQ92747 370 aa25.69■■□□□ 1.7
SSSCA1-205ENST00000527920 CLCC1Q96S66 551 aa25.69■■□□□ 1.7
SSSCA1-205ENST00000527920 DIABLOQ9NR28 239 aa25.69■■□□□ 1.7
SSSCA1-205ENST00000527920 TPSG1Q9NRR2 321 aa25.69■■□□□ 1.7
SSSCA1-205ENST00000527920 TRAV18A0A075B6X5 111 aa25.68■■□□□ 1.7
SSSCA1-205ENST00000527920 HOXD3P31249 432 aaPredicted RBP25.68■■□□□ 1.7
SSSCA1-205ENST00000527920 LUMP51884 338 aaPredicted RBP25.68■■□□□ 1.7
SSSCA1-205ENST00000527920 RAB25P57735 213 aa25.68■■□□□ 1.7
SSSCA1-205ENST00000527920 ACTBL2Q562R1 376 aa25.68■■□□□ 1.7
SSSCA1-205ENST00000527920 BVESQ8NE79 360 aa25.68■■□□□ 1.7
SSSCA1-205ENST00000527920 OR11H1Q8NG94 326 aa25.68■■□□□ 1.7
SSSCA1-205ENST00000527920 A3GALT2U3KPV4 340 aa25.68■■□□□ 1.7
SSSCA1-205ENST00000527920 FXYD3Q14802 87 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms