RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 ARPC1BO15143 372 aaKnown RBP17.23■□□□□ 0.35
TRAPPC4-208ENST00000527680 SPDEFO95238 335 aa17.23■□□□□ 0.35
TRAPPC4-208ENST00000527680 RANBP1P43487 201 aa17.23■□□□□ 0.35
TRAPPC4-208ENST00000527680 TPBGQ13641 420 aa17.23■□□□□ 0.35
TRAPPC4-208ENST00000527680 MUC7Q8TAX7 377 aa17.23■□□□□ 0.35
TRAPPC4-208ENST00000527680 FAM3DQ96BQ1 224 aa17.23■□□□□ 0.35
TRAPPC4-208ENST00000527680 SLC35D1Q9NTN3 355 aa17.23■□□□□ 0.35
TRAPPC4-208ENST00000527680 TRIM64CA6NLI5 447 aa17.22■□□□□ 0.35
TRAPPC4-208ENST00000527680 DENRO43583 198 aaKnown RBP17.22■□□□□ 0.35
TRAPPC4-208ENST00000527680 CD3GP09693 182 aa17.22■□□□□ 0.35
TRAPPC4-208ENST00000527680 CALRP27797 417 aaKnown RBP17.22■□□□□ 0.35
TRAPPC4-208ENST00000527680 IRF3Q14653 427 aa17.22■□□□□ 0.35
TRAPPC4-208ENST00000527680 ANKRD13BQ86YJ7 626 aa17.22■□□□□ 0.35
TRAPPC4-208ENST00000527680 RANGRFQ9HD47 186 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC4-208ENST00000527680 V9GY05 133 aa17.22■□□□□ 0.35
TRAPPC4-208ENST00000527680 IGKV1-6A0A0C4DH72 117 aa17.21■□□□□ 0.35
TRAPPC4-208ENST00000527680 ANKRD34BA5PLL1 514 aa17.21■□□□□ 0.35
TRAPPC4-208ENST00000527680 FOXI3A8MTJ6 420 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC4-208ENST00000527680 BET1O15155 118 aa17.21■□□□□ 0.35
TRAPPC4-208ENST00000527680 RGS10O43665 173 aa17.21■□□□□ 0.35
TRAPPC4-208ENST00000527680 PSMA1P25786 263 aaKnown RBP17.21■□□□□ 0.35
TRAPPC4-208ENST00000527680 SERPINB10P48595 397 aa17.21■□□□□ 0.35
TRAPPC4-208ENST00000527680 PLAC9Q5JTB6 97 aa17.21■□□□□ 0.35
TRAPPC4-208ENST00000527680 STUB1Q9UNE7 303 aa17.21■□□□□ 0.35
TRAPPC4-208ENST00000527680 RBM7Q9Y580 266 aaKnown RBP17.21■□□□□ 0.35
TRAPPC4-208ENST00000527680 A0A0G2JLM5 398 aa17.2■□□□□ 0.34
TRAPPC4-208ENST00000527680 ANKRD65E5RJM6 399 aa17.2■□□□□ 0.34
TRAPPC4-208ENST00000527680 ZP3P21754 424 aa17.2■□□□□ 0.34
TRAPPC4-208ENST00000527680 PSMD7P51665 324 aa17.2■□□□□ 0.34
TRAPPC4-208ENST00000527680 HES5Q5TA89 166 aa17.2■□□□□ 0.34
TRAPPC4-208ENST00000527680 HAPLN4Q86UW8 402 aa17.2■□□□□ 0.34
TRAPPC4-208ENST00000527680 POC5Q8NA72 575 aa17.2■□□□□ 0.34
TRAPPC4-208ENST00000527680 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC4-208ENST00000527680 OR4A4PQ8NGN8 299 aa17.2■□□□□ 0.34
TRAPPC4-208ENST00000527680 OR10J5Q8NHC4 309 aa17.2■□□□□ 0.34
TRAPPC4-208ENST00000527680 RAB22AQ9UL26 194 aa17.2■□□□□ 0.34
TRAPPC4-208ENST00000527680 FABP7O15540 132 aa17.19■□□□□ 0.34
TRAPPC4-208ENST00000527680 LGALS7P47929 136 aa17.19■□□□□ 0.34
TRAPPC4-208ENST00000527680 PJVKQ0ZLH3 352 aa17.19■□□□□ 0.34
TRAPPC4-208ENST00000527680 MLLT11Q13015 90 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC4-208ENST00000527680 CBX3Q13185 183 aa17.19■□□□□ 0.34
TRAPPC4-208ENST00000527680 RAB3CQ96E17 227 aa17.19■□□□□ 0.34
TRAPPC4-208ENST00000527680 OR2D2Q9H210 308 aa17.19■□□□□ 0.34
TRAPPC4-208ENST00000527680 DUSP21Q9H596 190 aa17.19■□□□□ 0.34
TRAPPC4-208ENST00000527680 AQP4P55087 323 aa17.18■□□□□ 0.34
TRAPPC4-208ENST00000527680 FABP5Q01469 135 aa17.18■□□□□ 0.34
TRAPPC4-208ENST00000527680 IGSF11Q5DX21 431 aa17.18■□□□□ 0.34
TRAPPC4-208ENST00000527680 CASC10Q5T4H9 136 aa17.18■□□□□ 0.34
TRAPPC4-208ENST00000527680 HARBI1Q96MB7 349 aa17.18■□□□□ 0.34
TRAPPC4-208ENST00000527680 MGLLQ99685 303 aa17.18■□□□□ 0.34
TRAPPC4-208ENST00000527680 PALMDQ9NP74 551 aa17.18■□□□□ 0.34
TRAPPC4-208ENST00000527680 NKX1-2Q9UD57 310 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC4-208ENST00000527680 STAB2Q8WWQ8 2551 aa17.18■□□□□ 0.34
TRAPPC4-208ENST00000527680 A0A075B6Q4 140 aa17.17■□□□□ 0.34
TRAPPC4-208ENST00000527680 TMEM272A0A1B0GTI8 110 aa17.17■□□□□ 0.34
TRAPPC4-208ENST00000527680 H3BUA1 57 aa17.17■□□□□ 0.34
TRAPPC4-208ENST00000527680 SHOXO15266 292 aa17.17■□□□□ 0.34
TRAPPC4-208ENST00000527680 GSTT2P0CG29 244 aa17.17■□□□□ 0.34
TRAPPC4-208ENST00000527680 GSTT2BP0CG30 244 aa17.17■□□□□ 0.34
TRAPPC4-208ENST00000527680 RYR3Q15413 4870 aa17.17■□□□□ 0.34
TRAPPC4-208ENST00000527680 ACOT13Q9NPJ3 140 aa17.17■□□□□ 0.34
TRAPPC4-208ENST00000527680 SDHAF2Q9NX18 166 aa17.17■□□□□ 0.34
TRAPPC4-208ENST00000527680 LYL1P12980 280 aa17.16■□□□□ 0.34
TRAPPC4-208ENST00000527680 GADD45AP24522 165 aa17.16■□□□□ 0.34
TRAPPC4-208ENST00000527680 MAP2K4P45985 399 aa17.16■□□□□ 0.34
TRAPPC4-208ENST00000527680 PLA2G7Q13093 441 aa17.16■□□□□ 0.34
TRAPPC4-208ENST00000527680 BVESQ8NE79 360 aa17.16■□□□□ 0.34
TRAPPC4-208ENST00000527680 TMEM68Q96MH6 324 aa17.16■□□□□ 0.34
TRAPPC4-208ENST00000527680 PHB2Q99623 299 aa17.16■□□□□ 0.34
TRAPPC4-208ENST00000527680 GINS4Q9BRT9 223 aa17.16■□□□□ 0.34
TRAPPC4-208ENST00000527680 PDCD5O14737 125 aa17.15■□□□□ 0.34
TRAPPC4-208ENST00000527680 IGLV1-51P01701 117 aa17.15■□□□□ 0.34
TRAPPC4-208ENST00000527680 IGLV2-23P01705 113 aa17.15■□□□□ 0.34
TRAPPC4-208ENST00000527680 IGHV4-30-4P0DP06 118 aa17.15■□□□□ 0.34
TRAPPC4-208ENST00000527680 TAGLNQ01995 201 aaKnown RBP17.15■□□□□ 0.34
TRAPPC4-208ENST00000527680 TATDN3Q17R31 274 aa17.15■□□□□ 0.34
TRAPPC4-208ENST00000527680 RTL8BQ17RB0 113 aa17.15■□□□□ 0.34
TRAPPC4-208ENST00000527680 MOGAT2Q3SYC2 334 aa17.15■□□□□ 0.34
TRAPPC4-208ENST00000527680 SGPP2Q8IWX5 399 aa17.15■□□□□ 0.34
TRAPPC4-208ENST00000527680 MAFIPQ8WZ33 124 aa17.15■□□□□ 0.34
TRAPPC4-208ENST00000527680 COA4Q9NYJ1 87 aa17.15■□□□□ 0.34
TRAPPC4-208ENST00000527680 KCNK7Q9Y2U2 307 aa17.15■□□□□ 0.34
TRAPPC4-208ENST00000527680 LDLRAD4O15165 306 aa17.14■□□□□ 0.33
TRAPPC4-208ENST00000527680 FCGR3AP08637 254 aa17.14■□□□□ 0.33
TRAPPC4-208ENST00000527680 APELAP0DMC3 54 aa17.14■□□□□ 0.33
TRAPPC4-208ENST00000527680 GNB3P16520 340 aa17.14■□□□□ 0.33
TRAPPC4-208ENST00000527680 AADACP22760 399 aa17.14■□□□□ 0.33
TRAPPC4-208ENST00000527680 TALDO1P37837 337 aa17.14■□□□□ 0.33
TRAPPC4-208ENST00000527680 SYNJ2BPP57105 145 aa17.14■□□□□ 0.33
TRAPPC4-208ENST00000527680 PRSS48Q7RTY5 328 aa17.14■□□□□ 0.33
TRAPPC4-208ENST00000527680 OR10R2Q8NGX6 335 aa17.14■□□□□ 0.33
TRAPPC4-208ENST00000527680 PEF1Q9UBV8 284 aaKnown RBP17.14■□□□□ 0.33
TRAPPC4-208ENST00000527680 ZNF230Q9UIE0 474 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC4-208ENST00000527680 HUWE1Q7Z6Z7 4374 aaKnown RBP17.14■□□□□ 0.33
TRAPPC4-208ENST00000527680 TRBV6-7A0A0A0MS04 114 aa17.13■□□□□ 0.33
TRAPPC4-208ENST00000527680 ERICH4A6NGS2 130 aa17.13■□□□□ 0.33
TRAPPC4-208ENST00000527680 CRYGBP07316 175 aa17.13■□□□□ 0.33
TRAPPC4-208ENST00000527680 RRASP10301 218 aa17.13■□□□□ 0.33
TRAPPC4-208ENST00000527680 DEFA5Q01523 94 aa17.13■□□□□ 0.33
TRAPPC4-208ENST00000527680 ARFRP1Q13795 201 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms