RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 RBKSQ9H477 322 aa13.17□□□□□ -0.3
USH1C-204ENST00000526313 RAI1Q7Z5J4 1906 aaPredicted RBP13.17□□□□□ -0.3
USH1C-204ENST00000526313 ATXN7O15265 892 aaPredicted RBP13.16□□□□□ -0.3
USH1C-204ENST00000526313 GYPAP02724 150 aa13.16□□□□□ -0.3
USH1C-204ENST00000526313 PRH1P02810 166 aa13.16□□□□□ -0.3
USH1C-204ENST00000526313 TMEM267Q0VDI3 215 aaPredicted RBP13.16□□□□□ -0.3
USH1C-204ENST00000526313 ADAM5Q6NVV9 412 aa13.16□□□□□ -0.3
USH1C-204ENST00000526313 TANC2Q9HCD6 1990 aa13.16□□□□□ -0.3
USH1C-204ENST00000526313 TRGV10A0A0A0MS01 117 aa13.16□□□□□ -0.3
USH1C-204ENST00000526313 TRGV8A0A0C4DH27 118 aa13.16□□□□□ -0.3
USH1C-204ENST00000526313 A0A1B0GW64 132 aa13.16□□□□□ -0.3
USH1C-204ENST00000526313 FAM90A9PA6NNJ1 464 aa13.16□□□□□ -0.3
USH1C-204ENST00000526313 C9JQL5 133 aa13.16□□□□□ -0.3
USH1C-204ENST00000526313 F8W036 122 aa13.16□□□□□ -0.3
USH1C-204ENST00000526313 TNFRSF13BO14836 293 aaPredicted RBP13.16□□□□□ -0.3
USH1C-204ENST00000526313 RAB7AP51149 207 aa13.16□□□□□ -0.3
USH1C-204ENST00000526313 POLEQ07864 2286 aa13.16□□□□□ -0.3
USH1C-204ENST00000526313 ZNF616Q08AN1 781 aa13.16□□□□□ -0.3
USH1C-204ENST00000526313 KLRB1Q12918 225 aa13.16□□□□□ -0.3
USH1C-204ENST00000526313 ZNF273Q14593 569 aa13.16□□□□□ -0.3
USH1C-204ENST00000526313 GUCA2BQ16661 112 aa13.16□□□□□ -0.3
USH1C-204ENST00000526313 TMEM30BQ3MIR4 351 aa13.16□□□□□ -0.3
USH1C-204ENST00000526313 UTF1Q5T230 341 aa13.16□□□□□ -0.3
USH1C-204ENST00000526313 PUSL1Q8N0Z8 303 aaKnown RBP13.16□□□□□ -0.3
USH1C-204ENST00000526313 ZNF525Q8N782 197 aa13.16□□□□□ -0.3
USH1C-204ENST00000526313 FAM216BQ8N7L0 139 aa13.16□□□□□ -0.3
USH1C-204ENST00000526313 ZNF439Q8NDP4 499 aa13.16□□□□□ -0.3
USH1C-204ENST00000526313 PARD6GQ9BYG4 376 aaPredicted RBP13.16□□□□□ -0.3
USH1C-204ENST00000526313 NKX6-2Q9C056 277 aaPredicted RBP13.16□□□□□ -0.3
USH1C-204ENST00000526313 NBEAQ8NFP9 2946 aa13.16□□□□□ -0.3
USH1C-204ENST00000526313 ZNF729A6NN14 1252 aaPredicted RBP13.15□□□□□ -0.3
USH1C-204ENST00000526313 E7EQL1 145 aa13.15□□□□□ -0.3
USH1C-204ENST00000526313 DNASE2O00115 360 aaPredicted RBP13.15□□□□□ -0.3
USH1C-204ENST00000526313 AGPAT2O15120 278 aa13.15□□□□□ -0.3
USH1C-204ENST00000526313 PPIHO43447 177 aaKnown RBP13.15□□□□□ -0.3
USH1C-204ENST00000526313 HPRT1P00492 218 aa13.15□□□□□ -0.3
USH1C-204ENST00000526313 OR8U8P0C7N1 319 aa13.15□□□□□ -0.3
USH1C-204ENST00000526313 METTL15P1P0C7V9 234 aa13.15□□□□□ -0.3
USH1C-204ENST00000526313 TLE1Q04724 770 aa13.15□□□□□ -0.3
USH1C-204ENST00000526313 CT45A1Q5HYN5 189 aa13.15□□□□□ -0.3
USH1C-204ENST00000526313 H2BFWTQ7Z2G1 175 aa13.15□□□□□ -0.3
USH1C-204ENST00000526313 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.15□□□□□ -0.3
USH1C-204ENST00000526313 ST6GALNAC3Q8NDV1 305 aa13.15□□□□□ -0.3
USH1C-204ENST00000526313 CT45A3Q8NHU0 189 aa13.15□□□□□ -0.3
USH1C-204ENST00000526313 DDB2Q92466 427 aa13.15□□□□□ -0.3
USH1C-204ENST00000526313 EGLN1Q9GZT9 426 aa13.15□□□□□ -0.3
USH1C-204ENST00000526313 SLC31A2O15432 143 aa13.15□□□□□ -0.3
USH1C-204ENST00000526313 DPPA3Q6W0C5 159 aa13.15□□□□□ -0.3
USH1C-204ENST00000526313 C1orf229Q6ZS94 237 aaPredicted RBP13.15□□□□□ -0.3
USH1C-204ENST00000526313 ZCCHC24Q8N2G6 241 aaKnown RBP13.15□□□□□ -0.3
USH1C-204ENST00000526313 FAM213BQ8TBF2 198 aa13.15□□□□□ -0.3
USH1C-204ENST00000526313 RNASE6Q93091 150 aaKnown RBP13.15□□□□□ -0.3
USH1C-204ENST00000526313 ABHD14AQ9BUJ0 271 aa13.15□□□□□ -0.3
USH1C-204ENST00000526313 DIDO1Q9BTC0 2240 aaKnown RBP13.14□□□□□ -0.31
USH1C-204ENST00000526313 TRAV38-1A0A0B4J264 116 aa13.14□□□□□ -0.31
USH1C-204ENST00000526313 MARCH11A6NNE9 402 aa13.14□□□□□ -0.31
USH1C-204ENST00000526313 TMEM178BH3BS89 294 aa13.14□□□□□ -0.31
USH1C-204ENST00000526313 IFNA5P01569 189 aa13.14□□□□□ -0.31
USH1C-204ENST00000526313 CASP6P55212 293 aa13.14□□□□□ -0.31
USH1C-204ENST00000526313 HBG1P69891 147 aa13.14□□□□□ -0.31
USH1C-204ENST00000526313 HBG2P69892 147 aa13.14□□□□□ -0.31
USH1C-204ENST00000526313 RUNX1Q01196 453 aa13.14□□□□□ -0.31
USH1C-204ENST00000526313 RPL39P5Q59GN2 51 aa13.14□□□□□ -0.31
USH1C-204ENST00000526313 LFNGQ8NES3 379 aa13.14□□□□□ -0.31
USH1C-204ENST00000526313 R3HDM4Q96D70 268 aa13.14□□□□□ -0.31
USH1C-204ENST00000526313 PLPPR2Q96GM1 343 aa13.14□□□□□ -0.31
USH1C-204ENST00000526313 ZNF251Q9BRH9 671 aa13.14□□□□□ -0.31
USH1C-204ENST00000526313 IDI2-AS1Q9NZ38 188 aa13.14□□□□□ -0.31
USH1C-204ENST00000526313 M0R1X1 148 aa13.13□□□□□ -0.31
USH1C-204ENST00000526313 SFTA3P0C7M3 94 aa13.13□□□□□ -0.31
USH1C-204ENST00000526313 KIR2DS2P43631 304 aa13.13□□□□□ -0.31
USH1C-204ENST00000526313 TAGLNQ01995 201 aaKnown RBP13.13□□□□□ -0.31
USH1C-204ENST00000526313 EFNB3Q15768 340 aa13.13□□□□□ -0.31
USH1C-204ENST00000526313 GUK1Q16774 197 aa13.13□□□□□ -0.31
USH1C-204ENST00000526313 LRRC75BQ2VPJ9 315 aa13.13□□□□□ -0.31
USH1C-204ENST00000526313 SPANXN5Q5MJ07 72 aa13.13□□□□□ -0.31
USH1C-204ENST00000526313 SPSB3Q6PJ21 355 aa13.13□□□□□ -0.31
USH1C-204ENST00000526313 SAP30LQ9HAJ7 183 aa13.13□□□□□ -0.31
USH1C-204ENST00000526313 PMS2P5A8MQ11 134 aa13.13□□□□□ -0.31
USH1C-204ENST00000526313 C1orf87Q8N0U7 546 aa13.13□□□□□ -0.31
USH1C-204ENST00000526313 PSMG3Q9BT73 122 aaPredicted RBP13.13□□□□□ -0.31
USH1C-204ENST00000526313 BTBD17A6NE02 478 aa13.12□□□□□ -0.31
USH1C-204ENST00000526313 FCGR3BO75015 233 aa13.12□□□□□ -0.31
USH1C-204ENST00000526313 MEF2CQ06413 473 aaPredicted RBP13.12□□□□□ -0.31
USH1C-204ENST00000526313 PEA15Q15121 130 aa13.12□□□□□ -0.31
USH1C-204ENST00000526313 THNSL2Q86YJ6 484 aa13.12□□□□□ -0.31
USH1C-204ENST00000526313 OR10A7Q8NGE5 316 aa13.12□□□□□ -0.31
USH1C-204ENST00000526313 CIB3Q96Q77 187 aaPredicted RBP13.12□□□□□ -0.31
USH1C-204ENST00000526313 OR4C12Q96R67 309 aa13.12□□□□□ -0.31
USH1C-204ENST00000526313 RPUSD1Q9UJJ7 312 aaKnown RBP13.12□□□□□ -0.31
USH1C-204ENST00000526313 LINC00312Q9Y6C7 94 aa13.12□□□□□ -0.31
USH1C-204ENST00000526313 IGF2RP11717 2491 aa13.12□□□□□ -0.31
USH1C-204ENST00000526313 PPIAL4EA0A075B759 164 aa13.12□□□□□ -0.31
USH1C-204ENST00000526313 hADV38S2A0JD32 116 aa13.12□□□□□ -0.31
USH1C-204ENST00000526313 NKX6-3A6NJ46 265 aa13.12□□□□□ -0.31
USH1C-204ENST00000526313 PPIAL4DF5H284 164 aa13.12□□□□□ -0.31
USH1C-204ENST00000526313 FCN3O75636 299 aa13.12□□□□□ -0.31
USH1C-204ENST00000526313 PPIAL4FP0DN26 164 aa13.12□□□□□ -0.31
USH1C-204ENST00000526313 APOBEC3AP31941 199 aaPredicted RBP13.12□□□□□ -0.31
USH1C-204ENST00000526313 PDLIM3Q53GG5 364 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms