RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 YPEL1O60688 119 aa13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 CRYABP02511 175 aaKnown RBP13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 TIMP3P35625 211 aa13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 ELLP55199 621 aaPredicted RBP13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 MSMPQ1L6U9 139 aa13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 ALKBH2Q6NS38 261 aa13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 YPEL2Q96QA6 119 aa13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 MAP1LC3BQ9GZQ8 125 aa13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 SLC39A9Q9NUM3 307 aa13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 VAX2Q9UIW0 290 aa13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 FAM215AQ9Y5M1 114 aa13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 CXorf65A6NEN9 183 aa13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 ZNF98A6NK75 572 aa13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 MARCH11A6NNE9 402 aa13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 IFNA17P01571 189 aa13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 SNRPEP62304 92 aaKnown RBP13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 RAB11AP62491 216 aa13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 NKX6-1P78426 367 aaPredicted RBP13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 LTC4SQ16873 150 aa13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 MORN2Q502X0 79 aa13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 ADAM5Q6NVV9 412 aa13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 RBMS3Q6XE24 437 aaKnown RBP13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 MOGAT3Q86VF5 341 aa13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 C1QL4Q86Z23 238 aa13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 GCSAMQ8N6F7 178 aa13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 R3HDM4Q96D70 268 aa13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 SFXN3Q9BWM7 321 aa13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 RAB9BQ9NP90 201 aa13.74□□□□□ -0.21
CCDC90B-203ENST00000525503 C5orf52A6NGY3 159 aa13.73□□□□□ -0.21
CCDC90B-203ENST00000525503 ZG16O60844 167 aa13.73□□□□□ -0.21
CCDC90B-203ENST00000525503 DUTP33316 252 aaKnown RBP13.73□□□□□ -0.21
CCDC90B-203ENST00000525503 FGF8P55075 233 aaPredicted RBP13.73□□□□□ -0.21
CCDC90B-203ENST00000525503 PNRC1Q12796 327 aaPredicted RBP13.73□□□□□ -0.21
CCDC90B-203ENST00000525503 HEPN1Q6WQI6 88 aa13.73□□□□□ -0.21
CCDC90B-203ENST00000525503 SSX7Q7RTT5 188 aa13.73□□□□□ -0.21
CCDC90B-203ENST00000525503 NCOR1P1Q9H4R4 102 aa13.73□□□□□ -0.21
CCDC90B-203ENST00000525503 OR6C3Q9NZP0 311 aa13.73□□□□□ -0.21
CCDC90B-203ENST00000525503 OTOGLQ3ZCN5 2332 aa13.73□□□□□ -0.21
CCDC90B-203ENST00000525503 IGHV3OR15-7A0A075B7D8 119 aa13.72□□□□□ -0.21
CCDC90B-203ENST00000525503 PMS2P5A8MQ11 134 aa13.72□□□□□ -0.21
CCDC90B-203ENST00000525503 F2RL2O00254 374 aa13.72□□□□□ -0.21
CCDC90B-203ENST00000525503 HPRT1P00492 218 aa13.72□□□□□ -0.21
CCDC90B-203ENST00000525503 FGF7P21781 194 aa13.72□□□□□ -0.21
CCDC90B-203ENST00000525503 SELENOVP59797 346 aa13.72□□□□□ -0.21
CCDC90B-203ENST00000525503 GNB2P62879 340 aa13.72□□□□□ -0.21
CCDC90B-203ENST00000525503 NCR3LG1Q68D85 454 aa13.72□□□□□ -0.21
CCDC90B-203ENST00000525503 FAM180AQ6UWF9 173 aa13.72□□□□□ -0.21
CCDC90B-203ENST00000525503 PRRC2CQ9Y520 2896 aaKnown RBP13.72□□□□□ -0.21
CCDC90B-203ENST00000525503 IGLV3-9A0A075B6K5 115 aa13.72□□□□□ -0.21
CCDC90B-203ENST00000525503 UBE2CO00762 179 aa13.72□□□□□ -0.21
CCDC90B-203ENST00000525503 LHBP01229 141 aa13.72□□□□□ -0.21
CCDC90B-203ENST00000525503 CD55P08174 381 aa13.72□□□□□ -0.21
CCDC90B-203ENST00000525503 KIR2DS2P43631 304 aa13.72□□□□□ -0.21
CCDC90B-203ENST00000525503 VWC2Q2TAL6 325 aa13.72□□□□□ -0.21
CCDC90B-203ENST00000525503 FAM90A2PQ658T7 463 aa13.72□□□□□ -0.21
CCDC90B-203ENST00000525503 ZNF709Q8N972 641 aa13.72□□□□□ -0.21
CCDC90B-203ENST00000525503 LHX4Q969G2 390 aa13.72□□□□□ -0.21
CCDC90B-203ENST00000525503 ZDHHC16Q969W1 377 aa13.72□□□□□ -0.21
CCDC90B-203ENST00000525503 C12orf57Q99622 126 aa13.72□□□□□ -0.21
CCDC90B-203ENST00000525503 CACNA1HO95180 2353 aa13.71□□□□□ -0.21
CCDC90B-203ENST00000525503 ZNF727A8MUV8 499 aa13.71□□□□□ -0.21
CCDC90B-203ENST00000525503 RBFOX2O43251 390 aaKnown RBP eCLIP13.71□□□□□ -0.21
CCDC90B-203ENST00000525503 SPRY3O43610 288 aa13.71□□□□□ -0.21
CCDC90B-203ENST00000525503 FCGR3BO75015 233 aa13.71□□□□□ -0.21
CCDC90B-203ENST00000525503 RPP30P78346 268 aaKnown RBP13.71□□□□□ -0.21
CCDC90B-203ENST00000525503 AARDQ4LEZ3 155 aa13.71□□□□□ -0.21
CCDC90B-203ENST00000525503 VHLLQ6RSH7 139 aa13.71□□□□□ -0.21
CCDC90B-203ENST00000525503 RPP25LQ8N5L8 163 aaKnown RBP13.71□□□□□ -0.21
CCDC90B-203ENST00000525503 CA5BP1Q8WTZ4 195 aa13.71□□□□□ -0.21
CCDC90B-203ENST00000525503 CTXND1A0A1B0GTU2 59 aa13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 M0R1X1 148 aa13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 ITGB1BP1O14713 200 aa13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 GATA4P43694 442 aa13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 EDDM3BP56851 147 aa13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 LINC00205P59089 165 aa13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 ERVK-16P61578 105 aa13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 KRTCAP3Q53RY4 240 aa13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 ITLN1Q8WWA0 313 aa13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 QTRT1Q9BXR0 403 aaKnown RBP13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 METTL1Q9UBP6 276 aaKnown RBP13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 URB1O60287 2271 aaKnown RBP13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 C17orf112F2Z3M2 114 aa13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 S100A8P05109 93 aa13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 CEACAM8P31997 349 aaPredicted RBP13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 MEOX2P50222 304 aa13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 RAB7AP51149 207 aa13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 LOXL3P58215 753 aa13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 PRAMEF5Q5TYX0 476 aa13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 ACSM6Q6P461 480 aa13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 RPRMLQ8N4K4 120 aa13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 RBMXL3Q8N7X1 1067 aaKnown RBP13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 OR4A16Q8NH70 328 aa13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 ACTR3CQ9C0K3 210 aaPredicted RBP13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 CALYQ9NYX4 217 aa13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 GAB2Q9UQC2 676 aa13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 PTPRBP23467 1997 aa13.7□□□□□ -0.22
CCDC90B-203ENST00000525503 TTC28Q96AY4 2481 aa13.69□□□□□ -0.22
CCDC90B-203ENST00000525503 OR2B8PP59922 312 aa13.69□□□□□ -0.22
CCDC90B-203ENST00000525503 SPCS3P61009 180 aa13.69□□□□□ -0.22
CCDC90B-203ENST00000525503 KIAA2026Q5HYC2 2103 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms