RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 NDUFA13Q9P0J0 144 aa13.75□□□□□ -0.21
NR1H3-228ENST00000525441 DPPA5A6NC42 116 aa13.74□□□□□ -0.21
NR1H3-228ENST00000525441 ATP6V0E1O15342 81 aa13.74□□□□□ -0.21
NR1H3-228ENST00000525441 SPDEFO95238 335 aa13.74□□□□□ -0.21
NR1H3-228ENST00000525441 DUS4LO95620 317 aaKnown RBP13.74□□□□□ -0.21
NR1H3-228ENST00000525441 RPLP1P05386 114 aaKnown RBP13.74□□□□□ -0.21
NR1H3-228ENST00000525441 MYCNOSP40205 109 aa13.74□□□□□ -0.21
NR1H3-228ENST00000525441 RPS16P62249 146 aaKnown RBP13.74□□□□□ -0.21
NR1H3-228ENST00000525441 TAGLNQ01995 201 aaKnown RBP13.74□□□□□ -0.21
NR1H3-228ENST00000525441 CBX3Q13185 183 aa13.74□□□□□ -0.21
NR1H3-228ENST00000525441 C8orf86Q6ZUL3 223 aa13.74□□□□□ -0.21
NR1H3-228ENST00000525441 FLYWCH2Q96CP2 140 aaKnown RBP13.74□□□□□ -0.21
NR1H3-228ENST00000525441 SLC25A38Q96DW6 304 aa13.74□□□□□ -0.21
NR1H3-228ENST00000525441 RCC1LQ96I51 464 aaKnown RBP13.74□□□□□ -0.21
NR1H3-228ENST00000525441 SLC35D1Q9NTN3 355 aa13.74□□□□□ -0.21
NR1H3-228ENST00000525441 SDHAF2Q9NX18 166 aa13.74□□□□□ -0.21
NR1H3-228ENST00000525441 SPATA2Q9UM82 520 aa13.74□□□□□ -0.21
NR1H3-228ENST00000525441 TRAV18A0A075B6X5 111 aa13.73□□□□□ -0.21
NR1H3-228ENST00000525441 IGKV1D-8A0A087WSZ0 117 aa13.73□□□□□ -0.21
NR1H3-228ENST00000525441 TRAV41A0A0B4J266 112 aa13.73□□□□□ -0.21
NR1H3-228ENST00000525441 ZNF701M0R085 212 aaPredicted RBP13.73□□□□□ -0.21
NR1H3-228ENST00000525441 CDX1P47902 265 aaPredicted RBP13.73□□□□□ -0.21
NR1H3-228ENST00000525441 THBS3P49746 956 aa13.73□□□□□ -0.21
NR1H3-228ENST00000525441 NCS1P62166 190 aa13.73□□□□□ -0.21
NR1H3-228ENST00000525441 LSM3P62310 102 aaKnown RBP13.73□□□□□ -0.21
NR1H3-228ENST00000525441 CNIH2Q6PI25 160 aa13.73□□□□□ -0.21
NR1H3-228ENST00000525441 TMEM65Q6PI78 240 aa13.73□□□□□ -0.21
NR1H3-228ENST00000525441 ISOC1Q96CN7 298 aa13.73□□□□□ -0.21
NR1H3-228ENST00000525441 ADTRPQ96IZ2 230 aa13.73□□□□□ -0.21
NR1H3-228ENST00000525441 BATF3Q9NR55 127 aa13.73□□□□□ -0.21
NR1H3-228ENST00000525441 METTL1Q9UBP6 276 aaKnown RBP13.73□□□□□ -0.21
NR1H3-228ENST00000525441 WSB1Q9Y6I7 421 aa13.73□□□□□ -0.21
NR1H3-228ENST00000525441 A6NHS1 94 aa13.72□□□□□ -0.21
NR1H3-228ENST00000525441 NOL3O60936 208 aaKnown RBP13.72□□□□□ -0.21
NR1H3-228ENST00000525441 IGKV1-16P04430 117 aa13.72□□□□□ -0.21
NR1H3-228ENST00000525441 RRASP10301 218 aa13.72□□□□□ -0.21
NR1H3-228ENST00000525441 IGLL1P15814 213 aa13.72□□□□□ -0.21
NR1H3-228ENST00000525441 VBP1P61758 197 aa13.72□□□□□ -0.21
NR1H3-228ENST00000525441 CX3CL1P78423 397 aa13.72□□□□□ -0.21
NR1H3-228ENST00000525441 PSG5Q15238 335 aa13.72□□□□□ -0.21
NR1H3-228ENST00000525441 RTL8BQ17RB0 113 aa13.72□□□□□ -0.21
NR1H3-228ENST00000525441 ETV3LQ6ZN32 361 aa13.72□□□□□ -0.21
NR1H3-228ENST00000525441 C18orf65Q6ZTR6 163 aa13.72□□□□□ -0.21
NR1H3-228ENST00000525441 REC114Q7Z4M0 266 aa13.72□□□□□ -0.21
NR1H3-228ENST00000525441 MRPL41Q8IXM3 137 aaKnown RBP13.72□□□□□ -0.21
NR1H3-228ENST00000525441 LINC00482Q8N8I6 264 aa13.72□□□□□ -0.21
NR1H3-228ENST00000525441 ABHD5Q8WTS1 349 aa13.72□□□□□ -0.21
NR1H3-228ENST00000525441 GPR61Q9BZJ8 451 aa13.72□□□□□ -0.21
NR1H3-228ENST00000525441 ANXA10Q9UJ72 324 aa13.72□□□□□ -0.21
NR1H3-228ENST00000525441 G3V318 75 aa13.71□□□□□ -0.21
NR1H3-228ENST00000525441 H3BMQ9 156 aa13.71□□□□□ -0.21
NR1H3-228ENST00000525441 SSX5O60225 188 aa13.71□□□□□ -0.21
NR1H3-228ENST00000525441 SLC22A5O76082 557 aa13.71□□□□□ -0.21
NR1H3-228ENST00000525441 PSMB8P28062 276 aa13.71□□□□□ -0.21
NR1H3-228ENST00000525441 PPIFP30405 207 aaKnown RBP13.71□□□□□ -0.21
NR1H3-228ENST00000525441 TGFBR1P36897 503 aa13.71□□□□□ -0.21
NR1H3-228ENST00000525441 RPS19P39019 145 aaKnown RBP13.71□□□□□ -0.21
NR1H3-228ENST00000525441 LGALS7P47929 136 aa13.71□□□□□ -0.21
NR1H3-228ENST00000525441 LUMP51884 338 aaPredicted RBP13.71□□□□□ -0.21
NR1H3-228ENST00000525441 LINC00205P59089 165 aa13.71□□□□□ -0.21
NR1H3-228ENST00000525441 TMEM267Q0VDI3 215 aaPredicted RBP13.71□□□□□ -0.21
NR1H3-228ENST00000525441 LCNL1Q6ZST4 164 aa13.71□□□□□ -0.21
NR1H3-228ENST00000525441 TCTEX1D1Q8N7M0 179 aa13.71□□□□□ -0.21
NR1H3-228ENST00000525441 MCRIP2Q9BUT9 160 aaKnown RBP13.71□□□□□ -0.21
NR1H3-228ENST00000525441 NECAP2Q9NVZ3 263 aa13.71□□□□□ -0.21
NR1H3-228ENST00000525441 RSL24D1Q9UHA3 163 aaKnown RBP13.71□□□□□ -0.21
NR1H3-228ENST00000525441 OR2W1Q9Y3N9 320 aa13.71□□□□□ -0.21
NR1H3-228ENST00000525441 CCL24O00175 119 aa13.7□□□□□ -0.22
NR1H3-228ENST00000525441 CRIP2P52943 208 aaPredicted RBP13.7□□□□□ -0.22
NR1H3-228ENST00000525441 ECSCRQ19T08 205 aa13.7□□□□□ -0.22
NR1H3-228ENST00000525441 ZNF562Q6V9R5 426 aa13.7□□□□□ -0.22
NR1H3-228ENST00000525441 DGCR14Q96DF8 476 aaKnown RBP13.7□□□□□ -0.22
NR1H3-228ENST00000525441 S100A16Q96FQ6 103 aaKnown RBP13.7□□□□□ -0.22
NR1H3-228ENST00000525441 CLCC1Q96S66 551 aa13.7□□□□□ -0.22
NR1H3-228ENST00000525441 P2RX4Q99571 388 aa13.7□□□□□ -0.22
NR1H3-228ENST00000525441 AUNIPQ9H7T9 357 aa13.7□□□□□ -0.22
NR1H3-228ENST00000525441 CCDC160A6NGH7 325 aa13.69□□□□□ -0.22
NR1H3-228ENST00000525441 FCN1O00602 326 aa13.69□□□□□ -0.22
NR1H3-228ENST00000525441 SLC25A17O43808 307 aa13.69□□□□□ -0.22
NR1H3-228ENST00000525441 IGLV1-40P01703 118 aa13.69□□□□□ -0.22
NR1H3-228ENST00000525441 NFYAP23511 347 aaPredicted RBP13.69□□□□□ -0.22
NR1H3-228ENST00000525441 CBX5P45973 191 aa13.69□□□□□ -0.22
NR1H3-228ENST00000525441 ARPC4P59998 168 aa13.69□□□□□ -0.22
NR1H3-228ENST00000525441 NDPQ00604 133 aa13.69□□□□□ -0.22
NR1H3-228ENST00000525441 UBE2NLQ5JXB2 153 aa13.69□□□□□ -0.22
NR1H3-228ENST00000525441 FOXB2Q5VYV0 432 aa13.69□□□□□ -0.22
NR1H3-228ENST00000525441 PPP1R27Q86WC6 154 aa13.69□□□□□ -0.22
NR1H3-228ENST00000525441 ZNF645Q8N7E2 425 aa13.69□□□□□ -0.22
NR1H3-228ENST00000525441 MINDY2Q8NBR6 621 aa13.69□□□□□ -0.22
NR1H3-228ENST00000525441 BVESQ8NE79 360 aa13.69□□□□□ -0.22
NR1H3-228ENST00000525441 BEST4Q8NFU0 473 aa13.69□□□□□ -0.22
NR1H3-228ENST00000525441 C4orf3Q8WVX3 66 aa13.69□□□□□ -0.22
NR1H3-228ENST00000525441 DPF1Q92782 380 aa13.69□□□□□ -0.22
NR1H3-228ENST00000525441 KCTD12Q96CX2 325 aaKnown RBP13.69□□□□□ -0.22
NR1H3-228ENST00000525441 C5orf30Q96GV9 206 aa13.69□□□□□ -0.22
NR1H3-228ENST00000525441 RAX2Q96IS3 184 aa13.69□□□□□ -0.22
NR1H3-228ENST00000525441 HARBI1Q96MB7 349 aa13.69□□□□□ -0.22
NR1H3-228ENST00000525441 FOXA2Q9Y261 457 aaPredicted RBP13.69□□□□□ -0.22
NR1H3-228ENST00000525441 A3GALT2U3KPV4 340 aa13.69□□□□□ -0.22
NR1H3-228ENST00000525441 J3QRK9 145 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms