RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 BCL2L11O43521 198 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 MFSD11O43934 449 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 OR7C2O60412 319 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 IGLV3-27P01718 113 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 IGHG2P01859 326 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 CRABP1P29762 137 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 TPI1P60174 286 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 FCN2Q15485 313 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 MMDQ15546 238 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 GRK1Q15835 563 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 DCUN1D2Q6PH85 259 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 LRP11Q86VZ4 500 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 FAM24BQ8N5W8 94 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 CIRBP-AS1Q8TBR5 109 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 GNPNAT1Q96EK6 184 aaPredicted RBP3.71□□□□□ -1.82
USP47-204ENST00000525078 CCL13Q99616 98 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 TSSK6Q9BXA6 273 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 MAP1LC3BQ9GZQ8 125 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 CCDC90BQ9GZT6 254 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 ALX4Q9H161 411 aaPredicted RBP3.71□□□□□ -1.82
USP47-204ENST00000525078 LYRM2Q9NU23 88 aaPredicted RBP3.71□□□□□ -1.82
USP47-204ENST00000525078 MED29Q9NX70 200 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 ZNF580Q9UK33 172 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 PRNDQ9UKY0 176 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 COQ4Q9Y3A0 265 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 MYO5BQ9ULV0 1848 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 NAV1Q8NEY1 1877 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 OR5H14A6NHG9 310 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.7□□□□□ -1.82
USP47-204ENST00000525078 PHOX2AO14813 284 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 ARPC5O15511 151 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 ZNF207O43670 478 aaKnown RBP3.7□□□□□ -1.82
USP47-204ENST00000525078 NDUFC2O95298 119 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 LY6G6DO95868 133 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 GYPCP04921 128 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 C1GALT1C1LP0DN25 315 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 CPMP14384 443 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 TGFBR1P36897 503 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 CXCL12P48061 93 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 DAPP51397 102 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 PSG7Q13046 419 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 PDGFRLQ15198 375 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 ZNF678Q5SXM1 525 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 SAMD13Q5VXD3 122 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 KRTCAP2Q8N6L1 136 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 OR9A2Q8NGT5 310 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 LINC01560Q8TB33 94 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 ITLN2Q8WWU7 325 aaPredicted RBP3.7□□□□□ -1.82
USP47-204ENST00000525078 MAL2Q969L2 176 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 TSPAN32Q96QS1 320 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 NMNAT3Q96T66 252 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 SHANK2-AS3Q9BTD1 123 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 GPR84Q9NQS5 396 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 TNFRSF19Q9NS68 423 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 CPDO75976 1380 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 ARAP1Q96P48 1450 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 PRXQ9BXM0 1461 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 PRDM2Q13029 1718 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 ARAP3Q8WWN8 1544 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 MIA2Q96PC5 1412 aa3.7□□□□□ -1.82
USP47-204ENST00000525078 YTHDC2Q9H6S0 1430 aaKnown RBP3.7□□□□□ -1.82
USP47-204ENST00000525078 TIAM1Q13009 1591 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 NCOA2Q15596 1464 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 ARHGEF10O15013 1369 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 KIF24Q5T7B8 1368 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 TRBV6-6A0A0A6YYG2 114 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 IGHV1-3A0A0C4DH29 117 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 H7C1C5 153 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 ORC5O43913 435 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 FSTL3O95633 263 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 CCNE2O96020 404 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 SPI1P17947 270 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 GLRXP35754 106 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 OPRK1P41145 380 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 NCALDP61601 193 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 LCN6P62502 163 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 ELF3P78545 371 aaPredicted RBP3.69□□□□□ -1.82
USP47-204ENST00000525078 EIF4EBP2Q13542 120 aaPredicted RBP3.69□□□□□ -1.82
USP47-204ENST00000525078 RHEBQ15382 184 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 SURF2Q15527 256 aaPredicted RBP3.69□□□□□ -1.82
USP47-204ENST00000525078 C12orf74Q32Q52 190 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 TMEM128Q5BJH2 165 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 C9orf64Q5T6V5 341 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 SLC22A24Q8N4F4 322 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 OR52N1Q8NH53 320 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 RAB2BQ8WUD1 216 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 ACOT12Q8WYK0 555 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 SLC25A46Q96AG3 418 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 GPR146Q96CH1 333 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 PEBP4Q96S96 227 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 NDFIP1Q9BT67 221 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 TMEM70Q9BUB7 260 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 PLA2G12AQ9BZM1 189 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 SH3BGRL3Q9H299 93 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 ZNF355PQ9NSJ1 428 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 ACER3Q9NUN7 267 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 GSKIPQ9P0R6 139 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 MDFICQ9P1T7 246 aa3.69□□□□□ -1.82
USP47-204ENST00000525078 ZNF230Q9UIE0 474 aaPredicted RBP3.69□□□□□ -1.82
USP47-204ENST00000525078 AK3Q9UIJ7 227 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms