RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 CDNFQ49AH0 187 aa14.45□□□□□ -0.1
CAPN1-203ENST00000525013 TPRA1Q86W33 373 aa14.45□□□□□ -0.1
CAPN1-203ENST00000525013 PPP1R27Q86WC6 154 aa14.45□□□□□ -0.1
CAPN1-203ENST00000525013 PDPNQ86YL7 162 aa14.45□□□□□ -0.1
CAPN1-203ENST00000525013 FLYWCH2Q96CP2 140 aaKnown RBP14.45□□□□□ -0.1
CAPN1-203ENST00000525013 TOLLIPQ9H0E2 274 aa14.45□□□□□ -0.1
CAPN1-203ENST00000525013 OR51E2Q9H255 320 aa14.45□□□□□ -0.1
CAPN1-203ENST00000525013 SLC35D1Q9NTN3 355 aa14.45□□□□□ -0.1
CAPN1-203ENST00000525013 ELF5Q9UKW6 265 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-203ENST00000525013 GAB2Q9UQC2 676 aa14.45□□□□□ -0.1
CAPN1-203ENST00000525013 FOXA2Q9Y261 457 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-203ENST00000525013 RRP15Q9Y3B9 282 aaKnown RBP14.45□□□□□ -0.1
CAPN1-203ENST00000525013 SNRPBP14678 240 aaKnown RBP14.44□□□□□ -0.1
CAPN1-203ENST00000525013 LUMP51884 338 aaPredicted RBP14.44□□□□□ -0.1
CAPN1-203ENST00000525013 OR1N2Q8NGR9 330 aa14.44□□□□□ -0.1
CAPN1-203ENST00000525013 CASTOR1Q8WTX7 329 aa14.44□□□□□ -0.1
CAPN1-203ENST00000525013 FAM103A1Q9BTL3 118 aaKnown RBP14.44□□□□□ -0.1
CAPN1-203ENST00000525013 SDHAF2Q9NX18 166 aa14.44□□□□□ -0.1
CAPN1-203ENST00000525013 ZMAT5Q9UDW3 170 aaKnown RBP14.44□□□□□ -0.1
CAPN1-203ENST00000525013 SORL1Q92673 2214 aa14.43□□□□□ -0.1
CAPN1-203ENST00000525013 LOC100506127A0A0U1RQW1 187 aa14.43□□□□□ -0.1
CAPN1-203ENST00000525013 SEC14L6B5MCN3 397 aa14.43□□□□□ -0.1
CAPN1-203ENST00000525013 SLC25A17O43808 307 aa14.43□□□□□ -0.1
CAPN1-203ENST00000525013 SOX15O60248 233 aa14.43□□□□□ -0.1
CAPN1-203ENST00000525013 SPDEFO95238 335 aa14.43□□□□□ -0.1
CAPN1-203ENST00000525013 DIRAS3O95661 229 aa14.43□□□□□ -0.1
CAPN1-203ENST00000525013 CA2P00918 260 aa14.43□□□□□ -0.1
CAPN1-203ENST00000525013 SDC2P34741 201 aa14.43□□□□□ -0.1
CAPN1-203ENST00000525013 DGCR2P98153 550 aa14.43□□□□□ -0.1
CAPN1-203ENST00000525013 MXD1Q05195 221 aa14.43□□□□□ -0.1
CAPN1-203ENST00000525013 NEDD8Q15843 81 aa14.43□□□□□ -0.1
CAPN1-203ENST00000525013 ACTBL2Q562R1 376 aa14.43□□□□□ -0.1
CAPN1-203ENST00000525013 C9orf66Q5T8R8 295 aa14.43□□□□□ -0.1
CAPN1-203ENST00000525013 UNQ5815/PRO19632Q6UWF5 114 aa14.43□□□□□ -0.1
CAPN1-203ENST00000525013 CENPOQ9BU64 300 aa14.43□□□□□ -0.1
CAPN1-203ENST00000525013 ST6GALNAC5Q9BVH7 336 aa14.43□□□□□ -0.1
CAPN1-203ENST00000525013 NUBP2Q9Y5Y2 271 aa14.43□□□□□ -0.1
CAPN1-203ENST00000525013 IGKV1D-8A0A087WSZ0 117 aa14.42□□□□□ -0.1
CAPN1-203ENST00000525013 I3L521 148 aa14.42□□□□□ -0.1
CAPN1-203ENST00000525013 OR8U8P0C7N1 319 aa14.42□□□□□ -0.1
CAPN1-203ENST00000525013 EGR2P11161 476 aaPredicted RBP14.42□□□□□ -0.1
CAPN1-203ENST00000525013 GNB1P62873 340 aa14.42□□□□□ -0.1
CAPN1-203ENST00000525013 ZNF616Q08AN1 781 aa14.42□□□□□ -0.1
CAPN1-203ENST00000525013 CBX3Q13185 183 aa14.42□□□□□ -0.1
CAPN1-203ENST00000525013 FHL3Q13643 280 aa14.42□□□□□ -0.1
CAPN1-203ENST00000525013 SRSF7Q16629 238 aaKnown RBP eCLIP14.42□□□□□ -0.1
CAPN1-203ENST00000525013 C19orf54Q5BKX5 351 aa14.42□□□□□ -0.1
CAPN1-203ENST00000525013 SFXN4Q6P4A7 337 aa14.42□□□□□ -0.1
CAPN1-203ENST00000525013 ZNF562Q6V9R5 426 aa14.42□□□□□ -0.1
CAPN1-203ENST00000525013 TCTEX1D1Q8N7M0 179 aa14.42□□□□□ -0.1
CAPN1-203ENST00000525013 LFNGQ8NES3 379 aa14.42□□□□□ -0.1
CAPN1-203ENST00000525013 GRPEL2Q8TAA5 225 aa14.42□□□□□ -0.1
CAPN1-203ENST00000525013 LGALS14Q8TCE9 139 aa14.42□□□□□ -0.1
CAPN1-203ENST00000525013 TPSG1Q9NRR2 321 aa14.42□□□□□ -0.1
CAPN1-203ENST00000525013 TNCP24821 2201 aa14.42□□□□□ -0.1
CAPN1-203ENST00000525013 COL7A1Q02388 2944 aa14.41□□□□□ -0.1
CAPN1-203ENST00000525013 TMEM235A6NFC5 223 aa14.41□□□□□ -0.1
CAPN1-203ENST00000525013 CNIH1O95406 144 aa14.41□□□□□ -0.1
CAPN1-203ENST00000525013 DTYMKP23919 212 aa14.41□□□□□ -0.1
CAPN1-203ENST00000525013 CRIP2P52943 208 aaPredicted RBP14.41□□□□□ -0.1
CAPN1-203ENST00000525013 RUNX1Q01196 453 aa14.41□□□□□ -0.1
CAPN1-203ENST00000525013 FXYD3Q14802 87 aa14.41□□□□□ -0.1
CAPN1-203ENST00000525013 RTL8BQ17RB0 113 aa14.41□□□□□ -0.1
CAPN1-203ENST00000525013 HACD4Q5VWC8 232 aa14.41□□□□□ -0.1
CAPN1-203ENST00000525013 Q6ZS49 121 aa14.41□□□□□ -0.1
CAPN1-203ENST00000525013 H1FOOQ8IZA3 346 aaPredicted RBP14.41□□□□□ -0.1
CAPN1-203ENST00000525013 ARPC1AQ92747 370 aa14.41□□□□□ -0.1
CAPN1-203ENST00000525013 MS4A10Q96PG2 267 aa14.41□□□□□ -0.1
CAPN1-203ENST00000525013 RNF167Q9H6Y7 350 aa14.41□□□□□ -0.1
CAPN1-203ENST00000525013 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.41□□□□□ -0.1
CAPN1-203ENST00000525013 J3QRK9 145 aa14.4□□□□□ -0.1
CAPN1-203ENST00000525013 SHOXO15266 292 aa14.4□□□□□ -0.1
CAPN1-203ENST00000525013 SCGNO76038 276 aa14.4□□□□□ -0.1
CAPN1-203ENST00000525013 CLEC2LP0C7M8 214 aa14.4□□□□□ -0.1
CAPN1-203ENST00000525013 CD36P16671 472 aa14.4□□□□□ -0.1
CAPN1-203ENST00000525013 CD40LGP29965 261 aa14.4□□□□□ -0.1
CAPN1-203ENST00000525013 LGALS7P47929 136 aa14.4□□□□□ -0.1
CAPN1-203ENST00000525013 GNG2P59768 71 aa14.4□□□□□ -0.1
CAPN1-203ENST00000525013 TAGLNQ01995 201 aaKnown RBP14.4□□□□□ -0.1
CAPN1-203ENST00000525013 ZNF260Q3ZCT1 412 aa14.4□□□□□ -0.1
CAPN1-203ENST00000525013 AKIRIN2Q53H80 203 aa14.4□□□□□ -0.1
CAPN1-203ENST00000525013 PYHIN1Q6K0P9 492 aa14.4□□□□□ -0.1
CAPN1-203ENST00000525013 BVESQ8NE79 360 aa14.4□□□□□ -0.1
CAPN1-203ENST00000525013 NUDCD2Q8WVJ2 157 aa14.4□□□□□ -0.1
CAPN1-203ENST00000525013 C5orf30Q96GV9 206 aa14.4□□□□□ -0.1
CAPN1-203ENST00000525013 HARBI1Q96MB7 349 aa14.4□□□□□ -0.1
CAPN1-203ENST00000525013 ALX4Q9H161 411 aaPredicted RBP14.4□□□□□ -0.1
CAPN1-203ENST00000525013 RAMP3O60896 148 aa14.39□□□□□ -0.11
CAPN1-203ENST00000525013 PITPNAQ00169 270 aa14.39□□□□□ -0.11
CAPN1-203ENST00000525013 KCTD21Q4G0X4 260 aa14.39□□□□□ -0.11
CAPN1-203ENST00000525013 IDNKQ5T6J7 187 aa14.39□□□□□ -0.11
CAPN1-203ENST00000525013 ASPHD1Q5U4P2 390 aa14.39□□□□□ -0.11
CAPN1-203ENST00000525013 DCSTAMPQ9H295 470 aa14.39□□□□□ -0.11
CAPN1-203ENST00000525013 ZNF355PQ9NSJ1 428 aa14.39□□□□□ -0.11
CAPN1-203ENST00000525013 RHBDL2Q9NX52 303 aa14.39□□□□□ -0.11
CAPN1-203ENST00000525013 ARPC1BO15143 372 aaKnown RBP14.38□□□□□ -0.11
CAPN1-203ENST00000525013 IGLV2-23P01705 113 aa14.38□□□□□ -0.11
CAPN1-203ENST00000525013 IGHV3-11P01762 117 aa14.38□□□□□ -0.11
CAPN1-203ENST00000525013 CTXN2P0C2S0 81 aa14.38□□□□□ -0.11
CAPN1-203ENST00000525013 RRASP10301 218 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms