RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	AKR1C4	P17516	323 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	RAB3B	P20337	219 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	RPL5	P46777	297 aa	Known RBP	3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	RPL34	P49207	117 aa	Known RBP	3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	VSX2	P58304	361 aa	Predicted RBP	3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	TAS2R43	P59537	309 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	HBG1	P69891	147 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	HBG2	P69892	147 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	CXCL6	P80162	114 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	RELA	Q04206	551 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	SMCO1	Q147U7	214 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	RGN	Q15493	299 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	PRR4	Q16378	134 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	ZNF239	Q16600	458 aa	Known RBP	3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	PYCR3	Q53H96	274 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	ZC2HC1B	Q5TFG8	222 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	TEX43	Q6ZNM6	134 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	TMEM144	Q7Z5S9	345 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	GKN2	Q86XP6	184 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	DEFB106A	Q8N104	65 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	COX18	Q8N8Q8	333 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	OR2Z1	Q8NG97	314 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	OR4P4	Q8NGL7	312 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	OR1N2	Q8NGR9	330 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	LHFPL5	Q8TAF8	219 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	SLC37A2	Q8TED4	501 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	NPRL2	Q8WTW4	380 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	CT55	Q8WUE5	264 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	ITLN2	Q8WWU7	325 aa	Predicted RBP	3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	SRSF12	Q8WXF0	261 aa	Known RBP	3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	HAUS1	Q96CS2	278 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	SEH1L	Q96EE3	360 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	GALNT14	Q96FL9	552 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	SFRP2	Q96HF1	295 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	SMIM14	Q96QK8	99 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	ZNF184	Q99676	751 aa	Predicted RBP	3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	SIGMAR1	Q99720	223 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	LITAF	Q99732	161 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	SUCNR1	Q9BXA5	334 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	OR11A1	Q9GZK7	315 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	MYOZ1	Q9NP98	299 aa	Predicted RBP	3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	AIG1	Q9NVV5	245 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	RBFOX1	Q9NWB1	397 aa	Known RBP	3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	PRO0628	Q9UI54	55 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	VPREB3	Q9UKI3	123 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	POLR1D	Q9Y2S0	133 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	F11R	Q9Y624	299 aa	Known RBP	3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	SLC22A7	Q9Y694	548 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	PIKFYVE	Q9Y2I7	2098 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	TLN2	Q9Y4G6	2542 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	PVALEF	A0A1B0GWK0	134 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356		A0A1B0GXF2	115 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	CIB4	A0PJX0	185 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	EFCAB10	A6NFE3	127 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	EVPLL	A8MZ36	301 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356		H0Y9J4	135 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	NPIPB7	O75200	414 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	KBTBD11	O94819	623 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	IGHV3-43D	P0DP04	118 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	CD1E	P15812	388 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	CXCR1	P25024	350 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	GFER	P55789	205 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	TAS2R19	P59542	299 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	NAA20	P61599	178 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	ZNF876P	Q49A33	203 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	LIN52	Q52LA3	116 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	BRMS1L	Q5PSV4	323 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	SFXN4	Q6P4A7	337 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	TMUB2	Q71RG4	321 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	UBAC2	Q8NBM4	344 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	OR1P1	Q8NH06	330 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	CYGB	Q8WWM9	190 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	YIPF5	Q969M3	257 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	MARC2	Q969Z3	335 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	BTF3L4	Q96K17	158 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	METTL26	Q96S19	204 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	EMC6	Q9BV81	110 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	OR51E2	Q9H255	320 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356		Q9H3A6	140 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	EDA2R	Q9HAV5	297 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	SLCO1B3	Q9NPD5	702 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	CMTM6	Q9NX76	183 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	TAS2R5	Q9NYW4	299 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	C14orf166	Q9Y224	244 aa	Known RBP	3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	PRELID3B	Q9Y3B1	194 aa		3.14	□□□□□ -1.91
PCM1-223	ENST00000524356	DYSF	O75923	2080 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356		A0A087WUJ7	227 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	TRAV8-6	A0A0B4J262	113 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	ZNF98	A6NK75	572 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	OR11H12	B2RN74	326 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	TRIM49D1	C9J1S8	452 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	SOCS3	O14543	225 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	MYL12B	O14950	172 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	SLC22A1	O15245	554 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	CHP2	O43745	196 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	SPAG7	O75391	227 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	CA11	O75493	328 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	LYPLA1	O75608	230 aa	Predicted RBP	3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	IL3	P08700	152 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	TAC1	P20366	129 aa		3.13	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms