RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 DSCAMO60469 2012 aa8.22□□□□□ -1.09
VPS13B-212ENST00000524330 ICE1Q9Y2F5 2266 aa8.22□□□□□ -1.09
VPS13B-212ENST00000524330 LOC400499M0QZD8 3231 aa8.22□□□□□ -1.09
VPS13B-212ENST00000524330 A0A087X0M5 115 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 SAA2-SAA4A0A096LPE2 208 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 PPIAL4CA0A0B4J2A2 164 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 A0A1B0GX30 115 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 MEX3AA1L020 520 aaKnown RBP8.21□□□□□ -1.1
VPS13B-212ENST00000524330 LINC00862A6NCI5 91 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 MARCH11A6NNE9 402 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 C17orf98A8MV24 154 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 TXNL1O43396 289 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 CHST1O43916 411 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 S1PR2O95136 353 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 IFNA5P01569 189 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 IGKV1-5P01602 117 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 SAA2P0DJI9 122 aaPredicted RBP8.21□□□□□ -1.1
VPS13B-212ENST00000524330 PPIAL4GP0DN37 164 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 MC5RP33032 325 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 G6PCP35575 357 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 RAB13P51153 203 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 RPL30P62888 115 aaKnown RBP8.21□□□□□ -1.1
VPS13B-212ENST00000524330 EWSR1Q01844 656 aaKnown RBP eCLIP8.21□□□□□ -1.1
VPS13B-212ENST00000524330 CXorf66Q5JRM2 361 aaPredicted RBP8.21□□□□□ -1.1
VPS13B-212ENST00000524330 AVPI1Q5T686 147 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 SLC25A24Q6NUK1 477 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 ALKAL2Q6UX46 152 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 TCF23Q7RTU1 214 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 UBAC2Q8NBM4 344 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 OR1S2Q8NGQ3 325 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 OR13D1Q8NGV5 346 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 C8orf46Q8TAG6 207 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 ZNF596Q8TC21 504 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 TSNAXQ99598 290 aaKnown RBP8.21□□□□□ -1.1
VPS13B-212ENST00000524330 PCGF1Q9BSM1 259 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 PATZ1Q9HBE1 687 aaKnown RBP8.21□□□□□ -1.1
VPS13B-212ENST00000524330 BARX1Q9HBU1 254 aaPredicted RBP8.21□□□□□ -1.1
VPS13B-212ENST00000524330 ENY2Q9NPA8 101 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 SLC35D1Q9NTN3 355 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 FKBP11Q9NYL4 201 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 PSENENQ9NZ42 101 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 CTSZQ9UBR2 303 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 FBXL17Q9UF56 701 aa8.21□□□□□ -1.1
VPS13B-212ENST00000524330 COL6A6A6NMZ7 2263 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 ARFGEF3Q5TH69 2177 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 CEBPZOSA8MTT3 80 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 NUDT19A8MXV4 375 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 LYNX1G3V0Z9 82 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 J3QR06 171 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 CFDP00746 253 aaPredicted RBP8.2□□□□□ -1.1
VPS13B-212ENST00000524330 IGKV1-39P01597 117 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 IGKV1D-39P04432 117 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 IGHV1-8P0DP01 117 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 LYNX1P0DP58 116 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 CCL3L1P16619 93 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 SULT1A1P50225 295 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 PDLIM4P50479 330 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 UBE2KP61086 200 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 BLOC1S1P78537 153 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 TNFRSF9Q07011 255 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 RPL39P5Q59GN2 51 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 WDR25Q64LD2 544 aaPredicted RBP8.2□□□□□ -1.1
VPS13B-212ENST00000524330 NCR3LG1Q68D85 454 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 ZNF833PQ6ZTB9 187 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 ABHD12Q8N2K0 398 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 TMEM252Q8N6L7 170 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 OR52E5Q8NH55 327 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 VSTM2AQ8TAG5 236 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 OSR1Q8TAX0 266 aaPredicted RBP8.2□□□□□ -1.1
VPS13B-212ENST00000524330 SCGB1C1Q8TD33 95 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 GNPNAT1Q96EK6 184 aaPredicted RBP8.2□□□□□ -1.1
VPS13B-212ENST00000524330 SSBP3Q9BWW4 388 aaPredicted RBP8.2□□□□□ -1.1
VPS13B-212ENST00000524330 CLEC7AQ9BXN2 247 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 MAGT1Q9H0U3 335 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 TMEM133Q9H2Q1 129 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 HIPK2Q9H2X6 1198 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 MED9Q9NWA0 146 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 NUP50Q9UKX7 468 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 DMXL2Q8TDJ6 3036 aa8.2□□□□□ -1.1
VPS13B-212ENST00000524330 LOC105371242A0A075B767 164 aa8.19□□□□□ -1.1
VPS13B-212ENST00000524330 FAM24AA6NFZ4 105 aa8.19□□□□□ -1.1
VPS13B-212ENST00000524330 MSGN1A6NI15 193 aa8.19□□□□□ -1.1
VPS13B-212ENST00000524330 LINC00473A8K010 186 aa8.19□□□□□ -1.1
VPS13B-212ENST00000524330 M0R1W7 72 aa8.19□□□□□ -1.1
VPS13B-212ENST00000524330 RAMP3O60896 148 aa8.19□□□□□ -1.1
VPS13B-212ENST00000524330 CRYZL1O95825 349 aa8.19□□□□□ -1.1
VPS13B-212ENST00000524330 IFNA17P01571 189 aa8.19□□□□□ -1.1
VPS13B-212ENST00000524330 RAB5CP51148 216 aa8.19□□□□□ -1.1
VPS13B-212ENST00000524330 ZNF134P52741 427 aa8.19□□□□□ -1.1
VPS13B-212ENST00000524330 SPCS3P61009 180 aa8.19□□□□□ -1.1
VPS13B-212ENST00000524330 ATP6V1FQ16864 119 aa8.19□□□□□ -1.1
VPS13B-212ENST00000524330 PDPNQ86YL7 162 aa8.19□□□□□ -1.1
VPS13B-212ENST00000524330 TGIF2LXQ8IUE1 241 aa8.19□□□□□ -1.1
VPS13B-212ENST00000524330 MRPL41Q8IXM3 137 aaKnown RBP8.19□□□□□ -1.1
VPS13B-212ENST00000524330 SLC7A5P1Q8MH63 180 aa8.19□□□□□ -1.1
VPS13B-212ENST00000524330 LEAP2Q969E1 77 aa8.19□□□□□ -1.1
VPS13B-212ENST00000524330 SAT2Q96F10 170 aaPredicted RBP8.19□□□□□ -1.1
VPS13B-212ENST00000524330 C5orf30Q96GV9 206 aa8.19□□□□□ -1.1
VPS13B-212ENST00000524330 HSPB7Q9UBY9 170 aa8.19□□□□□ -1.1
VPS13B-212ENST00000524330 PRNDQ9UKY0 176 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms