RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 SEC14L6B5MCN3 397 aa9.26□□□□□ -0.93
HDAC9-228ENST00000524023 HMGB3O15347 200 aaKnown RBP9.26□□□□□ -0.93
HDAC9-228ENST00000524023 TGOLN2O43493 480 aa9.26□□□□□ -0.93
HDAC9-228ENST00000524023 WISP2O76076 250 aa9.26□□□□□ -0.93
HDAC9-228ENST00000524023 MBP02144 154 aa9.26□□□□□ -0.93
HDAC9-228ENST00000524023 TRGC1P0CF51 173 aa9.26□□□□□ -0.93
HDAC9-228ENST00000524023 HOXC12P31275 282 aa9.26□□□□□ -0.93
HDAC9-228ENST00000524023 SSTR5P35346 364 aa9.26□□□□□ -0.93
HDAC9-228ENST00000524023 COL10A1Q03692 680 aa9.26□□□□□ -0.93
HDAC9-228ENST00000524023 CYP2G1PQ6ZSU1 146 aa9.26□□□□□ -0.93
HDAC9-228ENST00000524023 H2BFWTQ7Z2G1 175 aa9.26□□□□□ -0.93
HDAC9-228ENST00000524023 TPRX1Q8N7U7 411 aa9.26□□□□□ -0.93
HDAC9-228ENST00000524023 OR10P1Q8NGE3 313 aa9.26□□□□□ -0.93
HDAC9-228ENST00000524023 OR10G9Q8NGN4 311 aa9.26□□□□□ -0.93
HDAC9-228ENST00000524023 OR10G7Q8NGN6 311 aa9.26□□□□□ -0.93
HDAC9-228ENST00000524023 OR13A1Q8NGR1 328 aa9.26□□□□□ -0.93
HDAC9-228ENST00000524023 LURAP1Q96LR2 239 aa9.26□□□□□ -0.93
HDAC9-228ENST00000524023 CIB3Q96Q77 187 aaPredicted RBP9.26□□□□□ -0.93
HDAC9-228ENST00000524023 TAAR6Q96RI8 345 aa9.26□□□□□ -0.93
HDAC9-228ENST00000524023 UFSP2Q9NUQ7 469 aa9.26□□□□□ -0.93
HDAC9-228ENST00000524023 ELOA3CA0A087WX78 387 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-228ENST00000524023 IGHV3-43A0A0B4J1X8 118 aa9.25□□□□□ -0.93
HDAC9-228ENST00000524023 IFNL4K9M1U5 179 aa9.25□□□□□ -0.93
HDAC9-228ENST00000524023 M0R296 226 aa9.25□□□□□ -0.93
HDAC9-228ENST00000524023 PHOX2AO14813 284 aa9.25□□□□□ -0.93
HDAC9-228ENST00000524023 PPP1R2P9O14990 202 aa9.25□□□□□ -0.93
HDAC9-228ENST00000524023 TIMM8AO60220 97 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-228ENST00000524023 KBTBD11O94819 623 aa9.25□□□□□ -0.93
HDAC9-228ENST00000524023 SOD3P08294 240 aa9.25□□□□□ -0.93
HDAC9-228ENST00000524023 IGHV3-43DP0DP04 118 aa9.25□□□□□ -0.93
HDAC9-228ENST00000524023 COX5AP20674 150 aa9.25□□□□□ -0.93
HDAC9-228ENST00000524023 KITLGP21583 273 aa9.25□□□□□ -0.93
HDAC9-228ENST00000524023 KIR2DL2P43627 348 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-228ENST00000524023 PSMB3P49720 205 aa9.25□□□□□ -0.93
HDAC9-228ENST00000524023 LINC00205P59089 165 aa9.25□□□□□ -0.93
HDAC9-228ENST00000524023 RPS16P62249 146 aaKnown RBP9.25□□□□□ -0.93
HDAC9-228ENST00000524023 TFF3Q07654 80 aa9.25□□□□□ -0.93
HDAC9-228ENST00000524023 ADIRFQ15847 76 aa9.25□□□□□ -0.93
HDAC9-228ENST00000524023 TMEM241Q24JQ0 296 aa9.25□□□□□ -0.93
HDAC9-228ENST00000524023 FFAR4Q5NUL3 377 aa9.25□□□□□ -0.93
HDAC9-228ENST00000524023 NCR3LG1Q68D85 454 aa9.25□□□□□ -0.93
HDAC9-228ENST00000524023 VWA1Q6PCB0 445 aa9.25□□□□□ -0.93
HDAC9-228ENST00000524023 ZNF66Q6ZN08 573 aa9.25□□□□□ -0.93
HDAC9-228ENST00000524023 HIST3H2BBQ8N257 126 aa9.25□□□□□ -0.93
HDAC9-228ENST00000524023 MSL2Q9HCI7 577 aa9.25□□□□□ -0.93
HDAC9-228ENST00000524023 FZR1Q9UM11 496 aa9.25□□□□□ -0.93
HDAC9-228ENST00000524023 LAMP3Q9UQV4 416 aa9.25□□□□□ -0.93
HDAC9-228ENST00000524023 CACNA1GO43497 2377 aa9.25□□□□□ -0.93
HDAC9-228ENST00000524023 TRAV20A0A0B4J274 112 aa9.24□□□□□ -0.93
HDAC9-228ENST00000524023 TMEM250H0YL14 139 aa9.24□□□□□ -0.93
HDAC9-228ENST00000524023 FABP6P51161 128 aa9.24□□□□□ -0.93
HDAC9-228ENST00000524023 VWC2Q2TAL6 325 aa9.24□□□□□ -0.93
HDAC9-228ENST00000524023 SMIM21Q3B7S5 101 aa9.24□□□□□ -0.93
HDAC9-228ENST00000524023 Q3ZCU0 254 aa9.24□□□□□ -0.93
HDAC9-228ENST00000524023 GFI1BQ5VTD9 330 aa9.24□□□□□ -0.93
HDAC9-228ENST00000524023 RFESDQ8TAC1 157 aa9.24□□□□□ -0.93
HDAC9-228ENST00000524023 NPCDR1Q9BY65 106 aa9.24□□□□□ -0.93
HDAC9-228ENST00000524023 GPR61Q9BZJ8 451 aa9.24□□□□□ -0.93
HDAC9-228ENST00000524023 DEFB108AA8MXU0 73 aa9.24□□□□□ -0.93
HDAC9-228ENST00000524023 ST8SIA5O15466 376 aa9.24□□□□□ -0.93
HDAC9-228ENST00000524023 RBMXL2O75526 392 aaKnown RBP9.24□□□□□ -0.93
HDAC9-228ENST00000524023 CECR9P0C854 216 aa9.24□□□□□ -0.93
HDAC9-228ENST00000524023 MDKP21741 143 aaPredicted RBP9.24□□□□□ -0.93
HDAC9-228ENST00000524023 TLE1Q04724 770 aa9.24□□□□□ -0.93
HDAC9-228ENST00000524023 SPINK9Q5DT21 86 aa9.24□□□□□ -0.93
HDAC9-228ENST00000524023 C9orf106Q8NAJ2 232 aa9.24□□□□□ -0.93
HDAC9-228ENST00000524023 C1orf162Q8NEQ5 155 aaPredicted RBP9.24□□□□□ -0.93
HDAC9-228ENST00000524023 GATAD1Q8WUU5 269 aa9.24□□□□□ -0.93
HDAC9-228ENST00000524023 RPUSD4Q96CM3 377 aaKnown RBP9.24□□□□□ -0.93
HDAC9-228ENST00000524023 HSD17B10Q99714 261 aaKnown RBP9.24□□□□□ -0.93
HDAC9-228ENST00000524023 ACTR3CQ9C0K3 210 aaPredicted RBP9.24□□□□□ -0.93
HDAC9-228ENST00000524023 MANBALQ9NQG1 85 aa9.24□□□□□ -0.93
HDAC9-228ENST00000524023 PSG11Q9UQ72 335 aa9.24□□□□□ -0.93
HDAC9-228ENST00000524023 DMRT1Q9Y5R6 373 aa9.24□□□□□ -0.93
HDAC9-228ENST00000524023 HEATR1Q9H583 2144 aaKnown RBP9.24□□□□□ -0.93
HDAC9-228ENST00000524023 ZFHX4Q86UP3 3567 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 MARCH11A6NNE9 402 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 C15orf65H3BRN8 121 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 TUBG1P23258 451 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 RPL23P62829 140 aaKnown RBP9.23□□□□□ -0.93
HDAC9-228ENST00000524023 GNB2P62879 340 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 BSXQ3C1V8 233 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 ZNF718Q3SXZ3 478 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 C4orf17Q53FE4 359 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 C16orf82Q7Z2V1 217 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 OR10D4PQ8NGN7 298 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 RAB24Q969Q5 203 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 DCTN5Q9BTE1 182 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 TUBG2Q9NRH3 451 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 HCFC1P51610 2035 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 NKX2-8O15522 239 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 SPINT2O43291 252 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 NDUFS6O75380 124 aaKnown RBP9.23□□□□□ -0.93
HDAC9-228ENST00000524023 PFN1P07737 140 aaKnown RBP9.23□□□□□ -0.93
HDAC9-228ENST00000524023 ADH4P08319 380 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 GCH1P30793 250 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 CCL11P51671 97 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 HTD2P86397 168 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 FOXF2Q12947 444 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 PDZD11Q5EBL8 140 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms