RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 SLC35D1Q9NTN3 355 aa8.68□□□□□ -1.02
SDCBP-211ENST00000523441 CKLFQ9UBR5 152 aa8.68□□□□□ -1.02
SDCBP-211ENST00000523441 ZNF221Q9UK13 617 aa8.68□□□□□ -1.02
SDCBP-211ENST00000523441 PNMA8CA0A1B0GUJ8 204 aa8.67□□□□□ -1.02
SDCBP-211ENST00000523441 OR2J3O76001 311 aa8.67□□□□□ -1.02
SDCBP-211ENST00000523441 SPDEFO95238 335 aa8.67□□□□□ -1.02
SDCBP-211ENST00000523441 NANOS2P60321 138 aaKnown RBP8.67□□□□□ -1.02
SDCBP-211ENST00000523441 SNRPGP62308 76 aaKnown RBP8.67□□□□□ -1.02
SDCBP-211ENST00000523441 MRPL28Q13084 256 aaKnown RBP8.67□□□□□ -1.02
SDCBP-211ENST00000523441 OR2G6Q5TZ20 316 aa8.67□□□□□ -1.02
SDCBP-211ENST00000523441 ZNF57Q68EA5 555 aaPredicted RBP8.67□□□□□ -1.02
SDCBP-211ENST00000523441 OR10K2Q6IF99 312 aa8.67□□□□□ -1.02
SDCBP-211ENST00000523441 BTNL8Q6UX41 500 aa8.67□□□□□ -1.02
SDCBP-211ENST00000523441 IDO2Q6ZQW0 420 aa8.67□□□□□ -1.02
SDCBP-211ENST00000523441 TRUB1Q8WWH5 349 aaKnown RBP8.67□□□□□ -1.02
SDCBP-211ENST00000523441 Q96M66 194 aa8.67□□□□□ -1.02
SDCBP-211ENST00000523441 HARBI1Q96MB7 349 aa8.67□□□□□ -1.02
SDCBP-211ENST00000523441 NEDD4LQ96PU5 975 aa8.67□□□□□ -1.02
SDCBP-211ENST00000523441 RNF5Q99942 180 aa8.67□□□□□ -1.02
SDCBP-211ENST00000523441 ZC4H2Q9NQZ6 224 aa8.67□□□□□ -1.02
SDCBP-211ENST00000523441 ZNF230Q9UIE0 474 aaPredicted RBP8.67□□□□□ -1.02
SDCBP-211ENST00000523441 AP4S1Q9Y587 144 aa8.67□□□□□ -1.02
SDCBP-211ENST00000523441 ORC6Q9Y5N6 252 aa8.67□□□□□ -1.02
SDCBP-211ENST00000523441 DYNC1I1O14576 645 aa8.66□□□□□ -1.02
SDCBP-211ENST00000523441 SHOXO15266 292 aa8.66□□□□□ -1.02
SDCBP-211ENST00000523441 IGLV2-23P01705 113 aa8.66□□□□□ -1.02
SDCBP-211ENST00000523441 GLAP06280 429 aa8.66□□□□□ -1.02
SDCBP-211ENST00000523441 OR9G9P0C7N8 305 aa8.66□□□□□ -1.02
SDCBP-211ENST00000523441 IGFBP3P17936 291 aaPredicted RBP8.66□□□□□ -1.02
SDCBP-211ENST00000523441 CBLN1P23435 193 aa8.66□□□□□ -1.02
SDCBP-211ENST00000523441 ZNF45Q02386 682 aa8.66□□□□□ -1.02
SDCBP-211ENST00000523441 DNAL1Q4LDG9 190 aa8.66□□□□□ -1.02
SDCBP-211ENST00000523441 SLC25A30Q5SVS4 291 aa8.66□□□□□ -1.02
SDCBP-211ENST00000523441 RPL22L1Q6P5R6 122 aaKnown RBP8.66□□□□□ -1.02
SDCBP-211ENST00000523441 C19orf35Q6ZS72 473 aa8.66□□□□□ -1.02
SDCBP-211ENST00000523441 ZNF554Q86TJ5 538 aa8.66□□□□□ -1.02
SDCBP-211ENST00000523441 PDPNQ86YL7 162 aa8.66□□□□□ -1.02
SDCBP-211ENST00000523441 CCDC197Q8NCU1 140 aa8.66□□□□□ -1.02
SDCBP-211ENST00000523441 ADAD2Q8NCV1 583 aaKnown RBP8.66□□□□□ -1.02
SDCBP-211ENST00000523441 FBLIM1Q8WUP2 373 aa8.66□□□□□ -1.02
SDCBP-211ENST00000523441 OR14A2Q96R54 314 aa8.66□□□□□ -1.02
SDCBP-211ENST00000523441 HDHD3Q9BSH5 251 aaPredicted RBP8.66□□□□□ -1.02
SDCBP-211ENST00000523441 KCNK15Q9H427 330 aa8.66□□□□□ -1.02
SDCBP-211ENST00000523441 TECRQ9NZ01 308 aaKnown RBP8.66□□□□□ -1.02
SDCBP-211ENST00000523441 MLXQ9UH92 298 aa8.66□□□□□ -1.02
SDCBP-211ENST00000523441 ABCA13Q86UQ4 5058 aa8.65□□□□□ -1.02
SDCBP-211ENST00000523441 PROP1O75360 226 aa8.65□□□□□ -1.02
SDCBP-211ENST00000523441 LIMS3P0CW19 117 aa8.65□□□□□ -1.02
SDCBP-211ENST00000523441 LIMS4P0CW20 117 aa8.65□□□□□ -1.02
SDCBP-211ENST00000523441 CTRB1P17538 263 aa8.65□□□□□ -1.02
SDCBP-211ENST00000523441 CAPGP40121 348 aa8.65□□□□□ -1.02
SDCBP-211ENST00000523441 ETV1P50549 477 aa8.65□□□□□ -1.02
SDCBP-211ENST00000523441 APOC4P55056 127 aa8.65□□□□□ -1.02
SDCBP-211ENST00000523441 LY6G6FQ5SQ64 297 aa8.65□□□□□ -1.02
SDCBP-211ENST00000523441 CTRB2Q6GPI1 263 aa8.65□□□□□ -1.02
SDCBP-211ENST00000523441 SVOPQ8N4V2 548 aa8.65□□□□□ -1.02
SDCBP-211ENST00000523441 TMEM217Q8N7C4 229 aa8.65□□□□□ -1.02
SDCBP-211ENST00000523441 UXS1Q8NBZ7 420 aa8.65□□□□□ -1.02
SDCBP-211ENST00000523441 AGMATQ9BSE5 352 aa8.65□□□□□ -1.02
SDCBP-211ENST00000523441 LRRC42Q9Y546 428 aa8.65□□□□□ -1.02
SDCBP-211ENST00000523441 GMPPBQ9Y5P6 360 aa8.65□□□□□ -1.02
SDCBP-211ENST00000523441 FAT2Q9NYQ8 4349 aa8.64□□□□□ -1.03
SDCBP-211ENST00000523441 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.64□□□□□ -1.03
SDCBP-211ENST00000523441 FAM90A7PA6NKC0 464 aa8.64□□□□□ -1.03
SDCBP-211ENST00000523441 DEFB4AO15263 64 aa8.64□□□□□ -1.03
SDCBP-211ENST00000523441 GGCTO75223 188 aaKnown RBP8.64□□□□□ -1.03
SDCBP-211ENST00000523441 LALBAP00709 142 aa8.64□□□□□ -1.03
SDCBP-211ENST00000523441 IFNA4P05014 189 aa8.64□□□□□ -1.03
SDCBP-211ENST00000523441 ZBTB25P24278 435 aa8.64□□□□□ -1.03
SDCBP-211ENST00000523441 FCGR2BP31994 310 aaPredicted RBP8.64□□□□□ -1.03
SDCBP-211ENST00000523441 C15orf32Q32M92 178 aa8.64□□□□□ -1.03
SDCBP-211ENST00000523441 C10orf55Q5SWW7 151 aa8.64□□□□□ -1.03
SDCBP-211ENST00000523441 CLEC19AQ6UXS0 136 aa8.64□□□□□ -1.03
SDCBP-211ENST00000523441 RBPMS2Q6ZRY4 209 aaKnown RBP8.64□□□□□ -1.03
SDCBP-211ENST00000523441 STPG3Q8N7X2 389 aa8.64□□□□□ -1.03
SDCBP-211ENST00000523441 OR1L6Q8NGR2 347 aa8.64□□□□□ -1.03
SDCBP-211ENST00000523441 EDARADDQ8WWZ3 215 aa8.64□□□□□ -1.03
SDCBP-211ENST00000523441 SRSF12Q8WXF0 261 aaKnown RBP8.64□□□□□ -1.03
SDCBP-211ENST00000523441 TMEM68Q96MH6 324 aa8.64□□□□□ -1.03
SDCBP-211ENST00000523441 NICN1Q9BSH3 213 aa8.64□□□□□ -1.03
SDCBP-211ENST00000523441 KRTAP4-5Q9BYR2 181 aa8.64□□□□□ -1.03
SDCBP-211ENST00000523441 EXOSC1Q9Y3B2 195 aaKnown RBP8.64□□□□□ -1.03
SDCBP-211ENST00000523441 DNAH6Q9C0G6 4158 aa8.64□□□□□ -1.03
SDCBP-211ENST00000523441 PKHD1P08F94 4074 aa8.63□□□□□ -1.03
SDCBP-211ENST00000523441 IGHV3-35A0A0C4DH35 117 aa8.63□□□□□ -1.03
SDCBP-211ENST00000523441 FAM223BA6NKX1 122 aa8.63□□□□□ -1.03
SDCBP-211ENST00000523441 SRRM4A7MD48 611 aaKnown RBP8.63□□□□□ -1.03
SDCBP-211ENST00000523441 EI24O14681 340 aa8.63□□□□□ -1.03
SDCBP-211ENST00000523441 CRYGBP07316 175 aa8.63□□□□□ -1.03
SDCBP-211ENST00000523441 SCTP09683 121 aa8.63□□□□□ -1.03
SDCBP-211ENST00000523441 MED14OSP0DP75 135 aa8.63□□□□□ -1.03
SDCBP-211ENST00000523441 ARL3P36405 182 aa8.63□□□□□ -1.03
SDCBP-211ENST00000523441 CBX3Q13185 183 aa8.63□□□□□ -1.03
SDCBP-211ENST00000523441 RBMS2Q15434 407 aaKnown RBP8.63□□□□□ -1.03
SDCBP-211ENST00000523441 ANKRD55Q3KP44 614 aa8.63□□□□□ -1.03
SDCBP-211ENST00000523441 Q499Y3 187 aa8.63□□□□□ -1.03
SDCBP-211ENST00000523441 ZNF585BQ52M93 769 aa8.63□□□□□ -1.03
SDCBP-211ENST00000523441 Q6ZWC4 215 aa8.63□□□□□ -1.03
SDCBP-211ENST00000523441 WFDC3Q8IUB2 231 aa8.63□□□□□ -1.03
SDCBP-211ENST00000523441 FAM223AQ8IWN6 122 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms