RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 UCHL1P09936 223 aa11.8□□□□□ -0.52
MRPS28-209ENST00000522987 HSMCR30P0CW71 290 aa11.8□□□□□ -0.52
MRPS28-209ENST00000522987 TMEM50BP56557 158 aa11.8□□□□□ -0.52
MRPS28-209ENST00000522987 SYNJ2BPP57105 145 aa11.8□□□□□ -0.52
MRPS28-209ENST00000522987 SPHARQ15513 63 aa11.8□□□□□ -0.52
MRPS28-209ENST00000522987 POC5Q8NA72 575 aa11.8□□□□□ -0.52
MRPS28-209ENST00000522987 MAFIPQ8WZ33 124 aa11.8□□□□□ -0.52
MRPS28-209ENST00000522987 CITED4Q96RK1 184 aa11.8□□□□□ -0.52
MRPS28-209ENST00000522987 URM1Q9BTM9 101 aaKnown RBP11.8□□□□□ -0.52
MRPS28-209ENST00000522987 SLA2Q9H6Q3 261 aa11.8□□□□□ -0.52
MRPS28-209ENST00000522987 C12orf4Q9NQ89 552 aa11.8□□□□□ -0.52
MRPS28-209ENST00000522987 TRBV6-6A0A0A6YYG2 114 aa11.79□□□□□ -0.52
MRPS28-209ENST00000522987 ITGB1BP1O14713 200 aa11.79□□□□□ -0.52
MRPS28-209ENST00000522987 LDLRAD4O15165 306 aa11.79□□□□□ -0.52
MRPS28-209ENST00000522987 RAB11BQ15907 218 aa11.79□□□□□ -0.52
MRPS28-209ENST00000522987 PLAC9Q5JTB6 97 aa11.79□□□□□ -0.52
MRPS28-209ENST00000522987 OGFRL1Q5TC84 451 aaPredicted RBP11.79□□□□□ -0.52
MRPS28-209ENST00000522987 TMEM91Q6ZNR0 172 aa11.79□□□□□ -0.52
MRPS28-209ENST00000522987 PDPNQ86YL7 162 aa11.79□□□□□ -0.52
MRPS28-209ENST00000522987 SGPP2Q8IWX5 399 aa11.79□□□□□ -0.52
MRPS28-209ENST00000522987 C5orf30Q96GV9 206 aa11.79□□□□□ -0.52
MRPS28-209ENST00000522987 TM2D3Q9BRN9 247 aa11.79□□□□□ -0.52
MRPS28-209ENST00000522987 OR2D2Q9H210 308 aa11.79□□□□□ -0.52
MRPS28-209ENST00000522987 RIMS4Q9H426 269 aaPredicted RBP11.79□□□□□ -0.52
MRPS28-209ENST00000522987 RANGRFQ9HD47 186 aaPredicted RBP11.79□□□□□ -0.52
MRPS28-209ENST00000522987 RETNQ9HD89 108 aa11.79□□□□□ -0.52
MRPS28-209ENST00000522987 C8orf4Q9NR00 106 aa11.79□□□□□ -0.52
MRPS28-209ENST00000522987 COA4Q9NYJ1 87 aa11.79□□□□□ -0.52
MRPS28-209ENST00000522987 A0A075B6Q4 140 aa11.78□□□□□ -0.52
MRPS28-209ENST00000522987 LCE6AA0A183 80 aa11.78□□□□□ -0.52
MRPS28-209ENST00000522987 IZUMO1RA6ND01 250 aa11.78□□□□□ -0.52
MRPS28-209ENST00000522987 FOXI3A8MTJ6 420 aaPredicted RBP11.78□□□□□ -0.52
MRPS28-209ENST00000522987 TRDCB7Z8K6 153 aa11.78□□□□□ -0.52
MRPS28-209ENST00000522987 SLC17A2O00624 439 aa11.78□□□□□ -0.52
MRPS28-209ENST00000522987 IGLV2-23P01705 113 aa11.78□□□□□ -0.52
MRPS28-209ENST00000522987 IGSF11Q5DX21 431 aa11.78□□□□□ -0.52
MRPS28-209ENST00000522987 HES5Q5TA89 166 aa11.78□□□□□ -0.52
MRPS28-209ENST00000522987 BVESQ8NE79 360 aa11.78□□□□□ -0.52
MRPS28-209ENST00000522987 UFD1Q92890 307 aa11.78□□□□□ -0.52
MRPS28-209ENST00000522987 HARBI1Q96MB7 349 aa11.78□□□□□ -0.52
MRPS28-209ENST00000522987 RNF5Q99942 180 aa11.78□□□□□ -0.52
MRPS28-209ENST00000522987 C19orf73Q9NVV2 129 aa11.78□□□□□ -0.52
MRPS28-209ENST00000522987 SACSQ9NZJ4 4579 aa11.77□□□□□ -0.52
MRPS28-209ENST00000522987 ANKRD65E5RJM6 399 aa11.77□□□□□ -0.53
MRPS28-209ENST00000522987 J3QRK9 145 aa11.77□□□□□ -0.53
MRPS28-209ENST00000522987 RBMXL2O75526 392 aaKnown RBP11.77□□□□□ -0.53
MRPS28-209ENST00000522987 SPDEFO95238 335 aa11.77□□□□□ -0.53
MRPS28-209ENST00000522987 ZP3P21754 424 aa11.77□□□□□ -0.53
MRPS28-209ENST00000522987 FAM89BQ8N5H3 189 aa11.77□□□□□ -0.53
MRPS28-209ENST00000522987 PTX4Q96A99 478 aa11.77□□□□□ -0.53
MRPS28-209ENST00000522987 ISOC1Q96CN7 298 aa11.77□□□□□ -0.53
MRPS28-209ENST00000522987 PHB2Q99623 299 aa11.77□□□□□ -0.53
MRPS28-209ENST00000522987 HSF4Q9ULV5 492 aa11.77□□□□□ -0.53
MRPS28-209ENST00000522987 SELENOKQ9Y6D0 94 aa11.77□□□□□ -0.53
MRPS28-209ENST00000522987 STARD9Q9P2P6 4700 aa11.76□□□□□ -0.53
MRPS28-209ENST00000522987 SHOXO15266 292 aa11.76□□□□□ -0.53
MRPS28-209ENST00000522987 DENRO43583 198 aaKnown RBP11.76□□□□□ -0.53
MRPS28-209ENST00000522987 PRH1P02810 166 aa11.76□□□□□ -0.53
MRPS28-209ENST00000522987 GSTT2P0CG29 244 aa11.76□□□□□ -0.53
MRPS28-209ENST00000522987 GSTT2BP0CG30 244 aa11.76□□□□□ -0.53
MRPS28-209ENST00000522987 CD37P11049 281 aa11.76□□□□□ -0.53
MRPS28-209ENST00000522987 CALRP27797 417 aaKnown RBP11.76□□□□□ -0.53
MRPS28-209ENST00000522987 TAGLNQ01995 201 aaKnown RBP11.76□□□□□ -0.53
MRPS28-209ENST00000522987 DYRK1AQ13627 763 aa11.76□□□□□ -0.53
MRPS28-209ENST00000522987 KLF5Q13887 457 aaPredicted RBP11.76□□□□□ -0.53
MRPS28-209ENST00000522987 C2orf76Q3KRA6 126 aa11.76□□□□□ -0.53
MRPS28-209ENST00000522987 MOGAT2Q3SYC2 334 aa11.76□□□□□ -0.53
MRPS28-209ENST00000522987 IL34Q6ZMJ4 242 aa11.76□□□□□ -0.53
MRPS28-209ENST00000522987 IDO2Q6ZQW0 420 aa11.76□□□□□ -0.53
MRPS28-209ENST00000522987 OR9G4Q8NGQ1 327 aa11.76□□□□□ -0.53
MRPS28-209ENST00000522987 FAM3DQ96BQ1 224 aa11.76□□□□□ -0.53
MRPS28-209ENST00000522987 EDA2RQ9HAV5 297 aa11.76□□□□□ -0.53
MRPS28-209ENST00000522987 SDHAF2Q9NX18 166 aa11.76□□□□□ -0.53
MRPS28-209ENST00000522987 SCN3BQ9NY72 215 aa11.76□□□□□ -0.53
MRPS28-209ENST00000522987 ZNF230Q9UIE0 474 aaPredicted RBP11.76□□□□□ -0.53
MRPS28-209ENST00000522987 MGAT4AQ9UM21 535 aa11.76□□□□□ -0.53
MRPS28-209ENST00000522987 RBM7Q9Y580 266 aaKnown RBP11.76□□□□□ -0.53
MRPS28-209ENST00000522987 A0A0G2JLM5 398 aa11.75□□□□□ -0.53
MRPS28-209ENST00000522987 TMEM272A0A1B0GTI8 110 aa11.75□□□□□ -0.53
MRPS28-209ENST00000522987 SRRM4A7MD48 611 aaKnown RBP11.75□□□□□ -0.53
MRPS28-209ENST00000522987 FABP7O15540 132 aa11.75□□□□□ -0.53
MRPS28-209ENST00000522987 CRYGBP07316 175 aa11.75□□□□□ -0.53
MRPS28-209ENST00000522987 MAP2K4P45985 399 aa11.75□□□□□ -0.53
MRPS28-209ENST00000522987 IRF3Q14653 427 aa11.75□□□□□ -0.53
MRPS28-209ENST00000522987 TNXAQ16473 311 aa11.75□□□□□ -0.53
MRPS28-209ENST00000522987 HAGHQ16775 308 aa11.75□□□□□ -0.53
MRPS28-209ENST00000522987 OR56B1Q8NGI3 324 aa11.75□□□□□ -0.53
MRPS28-209ENST00000522987 FAM110AQ9BQ89 295 aa11.75□□□□□ -0.53
MRPS28-209ENST00000522987 TINAGL1Q9GZM7 467 aaPredicted RBP11.75□□□□□ -0.53
MRPS28-209ENST00000522987 CCDC90BQ9GZT6 254 aa11.75□□□□□ -0.53
MRPS28-209ENST00000522987 TUBA4BQ9H853 241 aa11.75□□□□□ -0.53
MRPS28-209ENST00000522987 PEF1Q9UBV8 284 aaKnown RBP11.75□□□□□ -0.53
MRPS28-209ENST00000522987 KCNK7Q9Y2U2 307 aa11.75□□□□□ -0.53
MRPS28-209ENST00000522987 CSMD3Q7Z407 3707 aa11.74□□□□□ -0.53
MRPS28-209ENST00000522987 A0A0B4J203 849 aa11.74□□□□□ -0.53
MRPS28-209ENST00000522987 MSGN1A6NI15 193 aa11.74□□□□□ -0.53
MRPS28-209ENST00000522987 CASQ2O14958 399 aaPredicted RBP11.74□□□□□ -0.53
MRPS28-209ENST00000522987 CSN3P07498 182 aa11.74□□□□□ -0.53
MRPS28-209ENST00000522987 FCGR3AP08637 254 aa11.74□□□□□ -0.53
MRPS28-209ENST00000522987 GNB3P16520 340 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms