RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 CNIH2Q6PI25 160 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 HAPLN4Q86UW8 402 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 ZNF429Q86V71 674 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 MINDY2Q8NBR6 621 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 POC1AQ8NBT0 407 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 PXT1Q8NFP0 134 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 OR52N4Q8NGI2 321 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 OR5A2Q8NGI9 324 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 OR51A2Q8NGJ7 313 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 OR5H6Q8NGV6 325 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 SETD6Q8TBK2 473 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 TRMT10AQ8TBZ6 339 aaKnown RBP5.07□□□□□ -1.6
SDCBP-210ENST00000522843 MYOZ3Q8TDC0 251 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 C4orf3Q8WVX3 66 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 DEDD2Q8WXF8 326 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 PIGCQ92535 297 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 DCUN1D4Q92564 292 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 CPNE2Q96FN4 548 aaPredicted RBP5.07□□□□□ -1.6
SDCBP-210ENST00000522843 CEP19Q96LK0 163 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 ZNF714Q96N38 554 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 CLEC7AQ9BXN2 247 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 PIGLQ9Y2B2 252 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 APOBP04114 4563 aaKnown RBP5.07□□□□□ -1.6
SDCBP-210ENST00000522843 FAM172BPA6NC97 362 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 I3L521 148 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 SULT1C2O00338 296 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 MAGEB3O15480 346 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 NRASP01111 189 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 EIF4EP06730 217 aaKnown RBP5.06□□□□□ -1.6
SDCBP-210ENST00000522843 ARSBP15848 533 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 ZNF93P35789 620 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-210ENST00000522843 TALDO1P37837 337 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 PTGFRP43088 359 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 ZP1P60852 638 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 GNB1P62873 340 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 SLC35B1P78383 322 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 SSBP1Q04837 148 aaKnown RBP5.06□□□□□ -1.6
SDCBP-210ENST00000522843 GPR176Q14439 515 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 OXA1LQ15070 435 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 KISS1Q15726 138 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 RAB11BQ15907 218 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 PNLIPRP3Q17RR3 467 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 CEACAM21Q3KPI0 293 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 TPTE2P1Q5T6R2 138 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 RAB12Q6IQ22 244 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 HAGHLQ6PII5 290 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-210ENST00000522843 SLC35E3Q7Z769 313 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 ANGPTL5Q86XS5 388 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 ZDHHC23Q8IYP9 409 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 SAXO1Q8IYX7 474 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 FTMTQ8N4E7 242 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 TPRX1Q8N7U7 411 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 SAMD12Q8N8I0 201 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 OR4D6Q8NGJ1 314 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 KCNG3Q8TAE7 436 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 ZNF671Q8TAW3 534 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 ST6GALNAC6Q969X2 333 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 SLC25A38Q96DW6 304 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 MRPS24Q96EL2 167 aaKnown RBP5.06□□□□□ -1.6
SDCBP-210ENST00000522843 ABHD1Q96SE0 405 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 NRIP2Q9BQI9 281 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 GNB4Q9HAV0 340 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 PLEKHA1Q9HB21 404 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 RHOFQ9HBH0 211 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 HES4Q9HCC6 221 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 DIABLOQ9NR28 239 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 PCDHB16Q9NRJ7 776 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 RASL12Q9NYN1 266 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 IL36GQ9NZH8 169 aa5.06□□□□□ -1.6
SDCBP-210ENST00000522843 ZNF107Q9UII5 783 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-210ENST00000522843 RBMX2Q9Y388 322 aaKnown RBP5.06□□□□□ -1.6
SDCBP-210ENST00000522843 TMEM272A0A1B0GTI8 110 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 PQLC2LA1A4F0 135 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 SMIM30A4D0T7 59 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 METTL21EPA6NDL7 271 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 GAGE10A6NGK3 116 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 FOXI3A8MTJ6 420 aaPredicted RBP5.05□□□□□ -1.6
SDCBP-210ENST00000522843 J3QRK9 145 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 OVOL1O14753 267 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 FGF16O43320 207 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 ZNF780AO75290 641 aaPredicted RBP5.05□□□□□ -1.6
SDCBP-210ENST00000522843 SAP30O75446 220 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 CA11O75493 328 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 BRI3O95415 125 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 IFNA6P05013 189 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 PSMB8P28062 276 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 GPR12P47775 334 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 POU3F4P49335 361 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 RBP2P50120 134 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 EDDM3BP56851 147 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 SCN1BQ07699 218 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 DIAPH2-AS1Q14236 149 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 SMIM21Q3B7S5 101 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 CXorf66Q5JRM2 361 aaPredicted RBP5.05□□□□□ -1.6
SDCBP-210ENST00000522843 HES5Q5TA89 166 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 PRAMEF5Q5TYX0 476 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 FAM90A2PQ658T7 463 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 ELP2Q6IA86 826 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 FAM131AQ6UXB0 335 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 ABHD12Q8N2K0 398 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms