RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 PLEKHA3Q9HB20 300 aa11.58□□□□□ -0.56
TRAPPC9-213ENST00000522504 AK3Q9UIJ7 227 aa11.58□□□□□ -0.56
TRAPPC9-213ENST00000522504 TRBV6-6A0A0A6YYG2 114 aa11.57□□□□□ -0.56
TRAPPC9-213ENST00000522504 A0A0G2JLM5 398 aa11.57□□□□□ -0.56
TRAPPC9-213ENST00000522504 EFCAB10A6NFE3 127 aa11.57□□□□□ -0.56
TRAPPC9-213ENST00000522504 TMEM14DPA8MWL7 114 aa11.57□□□□□ -0.56
TRAPPC9-213ENST00000522504 SOCS1O15524 211 aa11.57□□□□□ -0.56
TRAPPC9-213ENST00000522504 JTBO76095 146 aa11.57□□□□□ -0.56
TRAPPC9-213ENST00000522504 UBBP0CG47 229 aa11.57□□□□□ -0.56
TRAPPC9-213ENST00000522504 APELAP0DMC3 54 aa11.57□□□□□ -0.56
TRAPPC9-213ENST00000522504 ZBTB25P24278 435 aa11.57□□□□□ -0.56
TRAPPC9-213ENST00000522504 HLA-DRB3P79483 266 aa11.57□□□□□ -0.56
TRAPPC9-213ENST00000522504 MOB1BQ7L9L4 216 aa11.57□□□□□ -0.56
TRAPPC9-213ENST00000522504 GTSCR1Q86UQ5 136 aa11.57□□□□□ -0.56
TRAPPC9-213ENST00000522504 PDPNQ86YL7 162 aa11.57□□□□□ -0.56
TRAPPC9-213ENST00000522504 CYGBQ8WWM9 190 aa11.57□□□□□ -0.56
TRAPPC9-213ENST00000522504 TINAGL1Q9GZM7 467 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC9-213ENST00000522504 PEF1Q9UBV8 284 aaKnown RBP11.57□□□□□ -0.56
TRAPPC9-213ENST00000522504 RBMY1BA6NDE4 496 aaKnown RBP11.56□□□□□ -0.56
TRAPPC9-213ENST00000522504 RBMY1EA6NEQ0 496 aaKnown RBP11.56□□□□□ -0.56
TRAPPC9-213ENST00000522504 CNIH1O95406 144 aa11.56□□□□□ -0.56
TRAPPC9-213ENST00000522504 RBMY1DP0C7P1 496 aaKnown RBP11.56□□□□□ -0.56
TRAPPC9-213ENST00000522504 AQP4P55087 323 aa11.56□□□□□ -0.56
TRAPPC9-213ENST00000522504 MED21Q13503 144 aa11.56□□□□□ -0.56
TRAPPC9-213ENST00000522504 MOGAT2Q3SYC2 334 aa11.56□□□□□ -0.56
TRAPPC9-213ENST00000522504 ACSM3Q53FZ2 586 aa11.56□□□□□ -0.56
TRAPPC9-213ENST00000522504 LCN12Q6JVE5 192 aa11.56□□□□□ -0.56
TRAPPC9-213ENST00000522504 IZUMO2Q6UXV1 221 aa11.56□□□□□ -0.56
TRAPPC9-213ENST00000522504 Q8N402 240 aa11.56□□□□□ -0.56
TRAPPC9-213ENST00000522504 KCNG3Q8TAE7 436 aa11.56□□□□□ -0.56
TRAPPC9-213ENST00000522504 EDARADDQ8WWZ3 215 aa11.56□□□□□ -0.56
TRAPPC9-213ENST00000522504 C5orf30Q96GV9 206 aa11.56□□□□□ -0.56
TRAPPC9-213ENST00000522504 LPAR5Q9H1C0 372 aa11.56□□□□□ -0.56
TRAPPC9-213ENST00000522504 WFDC10AQ9H1F0 79 aa11.56□□□□□ -0.56
TRAPPC9-213ENST00000522504 Q9N2K0 584 aa11.56□□□□□ -0.56
TRAPPC9-213ENST00000522504 PLEKHJ1Q9NW61 149 aa11.56□□□□□ -0.56
TRAPPC9-213ENST00000522504 SIGLEC8Q9NYZ4 499 aa11.56□□□□□ -0.56
TRAPPC9-213ENST00000522504 CEPT1Q9Y6K0 416 aa11.56□□□□□ -0.56
TRAPPC9-213ENST00000522504 SRRM4A7MD48 611 aaKnown RBP11.55□□□□□ -0.56
TRAPPC9-213ENST00000522504 FOXI3A8MTJ6 420 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC9-213ENST00000522504 M0R1X1 148 aa11.55□□□□□ -0.56
TRAPPC9-213ENST00000522504 BRI3O95415 125 aa11.55□□□□□ -0.56
TRAPPC9-213ENST00000522504 CD37P11049 281 aa11.55□□□□□ -0.56
TRAPPC9-213ENST00000522504 MAPK3P27361 379 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC9-213ENST00000522504 WNT4P56705 351 aa11.55□□□□□ -0.56
TRAPPC9-213ENST00000522504 BVESQ8NE79 360 aa11.55□□□□□ -0.56
TRAPPC9-213ENST00000522504 PSORS1C1Q9UIG5 152 aa11.55□□□□□ -0.56
TRAPPC9-213ENST00000522504 ZNF221Q9UK13 617 aa11.55□□□□□ -0.56
TRAPPC9-213ENST00000522504 SHISA3A0PJX4 238 aa11.54□□□□□ -0.56
TRAPPC9-213ENST00000522504 ZNF785A8K8V0 405 aa11.54□□□□□ -0.56
TRAPPC9-213ENST00000522504 APOA2P02652 100 aa11.54□□□□□ -0.56
TRAPPC9-213ENST00000522504 GNAO1P09471 354 aa11.54□□□□□ -0.56
TRAPPC9-213ENST00000522504 CD7P09564 240 aa11.54□□□□□ -0.56
TRAPPC9-213ENST00000522504 CD3GP09693 182 aa11.54□□□□□ -0.56
TRAPPC9-213ENST00000522504 EDN2P20800 178 aa11.54□□□□□ -0.56
TRAPPC9-213ENST00000522504 TMEM50BP56557 158 aa11.54□□□□□ -0.56
TRAPPC9-213ENST00000522504 CD81P60033 236 aa11.54□□□□□ -0.56
TRAPPC9-213ENST00000522504 CD300EQ496F6 205 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC9-213ENST00000522504 RBM48Q5RL73 367 aaKnown RBP11.54□□□□□ -0.56
TRAPPC9-213ENST00000522504 GLT8D1Q68CQ7 371 aa11.54□□□□□ -0.56
TRAPPC9-213ENST00000522504 AHSA2Q719I0 299 aa11.54□□□□□ -0.56
TRAPPC9-213ENST00000522504 FAM89BQ8N5H3 189 aa11.54□□□□□ -0.56
TRAPPC9-213ENST00000522504 DEFB125Q8N687 156 aa11.54□□□□□ -0.56
TRAPPC9-213ENST00000522504 NANOGP1Q8N7R0 232 aa11.54□□□□□ -0.56
TRAPPC9-213ENST00000522504 GFI1Q99684 422 aa11.54□□□□□ -0.56
TRAPPC9-213ENST00000522504 RIMS4Q9H426 269 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC9-213ENST00000522504 SLC35D1Q9NTN3 355 aa11.54□□□□□ -0.56
TRAPPC9-213ENST00000522504 COA4Q9NYJ1 87 aa11.54□□□□□ -0.56
TRAPPC9-213ENST00000522504 RDH8Q9NYR8 311 aa11.54□□□□□ -0.56
TRAPPC9-213ENST00000522504 BMPR1BO00238 502 aa11.53□□□□□ -0.56
TRAPPC9-213ENST00000522504 MYL12BO14950 172 aa11.53□□□□□ -0.56
TRAPPC9-213ENST00000522504 PRH1P02810 166 aa11.53□□□□□ -0.56
TRAPPC9-213ENST00000522504 AADACP22760 399 aa11.53□□□□□ -0.56
TRAPPC9-213ENST00000522504 P2RY14Q15391 338 aa11.53□□□□□ -0.56
TRAPPC9-213ENST00000522504 RPEL1Q2QD12 228 aa11.53□□□□□ -0.56
TRAPPC9-213ENST00000522504 DHRSXQ8N5I4 330 aa11.53□□□□□ -0.56
TRAPPC9-213ENST00000522504 ADAD2Q8NCV1 583 aaKnown RBP11.53□□□□□ -0.56
TRAPPC9-213ENST00000522504 PHYHIPQ92561 330 aa11.53□□□□□ -0.56
TRAPPC9-213ENST00000522504 THRSPQ92748 146 aa11.53□□□□□ -0.56
TRAPPC9-213ENST00000522504 USMG5Q96IX5 58 aa11.53□□□□□ -0.56
TRAPPC9-213ENST00000522504 NEURL2Q9BR09 285 aa11.53□□□□□ -0.56
TRAPPC9-213ENST00000522504 MSGN1A6NI15 193 aa11.52□□□□□ -0.57
TRAPPC9-213ENST00000522504 OR2A4O95047 310 aa11.52□□□□□ -0.57
TRAPPC9-213ENST00000522504 BPNT1O95861 308 aa11.52□□□□□ -0.57
TRAPPC9-213ENST00000522504 SRMP19623 302 aa11.52□□□□□ -0.57
TRAPPC9-213ENST00000522504 LGALS7P47929 136 aa11.52□□□□□ -0.57
TRAPPC9-213ENST00000522504 HSPA13P48723 471 aa11.52□□□□□ -0.57
TRAPPC9-213ENST00000522504 ZNF45Q02386 682 aa11.52□□□□□ -0.57
TRAPPC9-213ENST00000522504 PLAC9Q5JTB6 97 aa11.52□□□□□ -0.57
TRAPPC9-213ENST00000522504 TTC23Q5W5X9 447 aa11.52□□□□□ -0.57
TRAPPC9-213ENST00000522504 SETD9Q8NE22 299 aa11.52□□□□□ -0.57
TRAPPC9-213ENST00000522504 ARHGAP5-AS1Q96IT6 56 aa11.52□□□□□ -0.57
TRAPPC9-213ENST00000522504 HARBI1Q96MB7 349 aa11.52□□□□□ -0.57
TRAPPC9-213ENST00000522504 TMEM68Q96MH6 324 aa11.52□□□□□ -0.57
TRAPPC9-213ENST00000522504 C12orf4Q9NQ89 552 aa11.52□□□□□ -0.57
TRAPPC9-213ENST00000522504 FKBP14Q9NWM8 211 aa11.52□□□□□ -0.57
TRAPPC9-213ENST00000522504 SDHAF2Q9NX18 166 aa11.52□□□□□ -0.57
TRAPPC9-213ENST00000522504 ZNF230Q9UIE0 474 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC9-213ENST00000522504 TRDCB7Z8K6 153 aa11.51□□□□□ -0.57
TRAPPC9-213ENST00000522504 TATDN3Q17R31 274 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms