RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 DRAM1Q8N682 238 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 C5orf56Q8N8D9 126 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 GDPD1Q8N9F7 314 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 ASCC1Q8N9N2 400 aaKnown RBP2.8□□□□□ -1.96
VPS13B-208ENST00000521037 LRRC75AQ8NAA5 344 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 ZNRF1Q8ND25 227 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 OR11H1Q8NG94 326 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 OR9Q2Q8NGE9 314 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 OR5AP2Q8NGF4 316 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 OR8J2Q8NGG1 315 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 OR4P4Q8NGL7 312 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 OR9Q1Q8NGQ5 310 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 OR5J2Q8NH18 312 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 OR52P1PQ8NH57 321 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 OR1F12Q8NHA8 337 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 NDNFQ8TB73 568 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 C4orf3Q8WVX3 66 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 AP3S1Q92572 193 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 MED30Q96HR3 178 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 CEP19Q96LK0 163 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 OR52E6Q96RD3 313 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 COPS4Q9BT78 406 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 HCAR1Q9BXC0 346 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 NDEL1Q9GZM8 345 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 COMMD4Q9H0A8 199 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 IKZF5Q9H5V7 419 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 NIPAL2Q9H841 368 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 Q9HAA7 133 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 NRN1Q9NPD7 142 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 MEPEQ9NQ76 525 aaPredicted RBP2.8□□□□□ -1.96
VPS13B-208ENST00000521037 POLE4Q9NR33 117 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 TMEM100Q9NV29 134 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 VAPAQ9P0L0 249 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 PITPNC1Q9UKF7 332 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 ZNF443Q9Y2A4 671 aaPredicted RBP2.8□□□□□ -1.96
VPS13B-208ENST00000521037 POLDIP2Q9Y2S7 368 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 FBXO7Q9Y3I1 522 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 SAMHD1Q9Y3Z3 626 aaKnown RBP2.8□□□□□ -1.96
VPS13B-208ENST00000521037 TIMM10BQ9Y5J6 103 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 LPAP08519 4548 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 TNCP24821 2201 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 A0A1W2PPE3 182 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 CCDC182A6NF36 153 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 EPM2AB3EWF7 344 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 H3BSH0 61 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 RFXANKO14593 260 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 TNFSF12O43508 249 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 RNF13O43567 381 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 NDUFB3O43676 98 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 MMP23AO75900 390 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 FADS2O95864 444 aaKnown RBP2.79□□□□□ -1.96
VPS13B-208ENST00000521037 IGHG4P01861 327 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 S100A9P06702 114 aaKnown RBP2.79□□□□□ -1.96
VPS13B-208ENST00000521037 ADORA3P0DMS8 318 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 CFL1P23528 166 aaKnown RBP2.79□□□□□ -1.96
VPS13B-208ENST00000521037 PSMA1P25786 263 aaKnown RBP2.79□□□□□ -1.96
VPS13B-208ENST00000521037 HLA-DMAP28067 261 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 RRM2P31350 389 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 CDKN2CP42773 168 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 KIR3DL2P43630 455 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 CDKN1BP46527 198 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 GZMMP51124 257 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 DAPP51397 102 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 RORCP51449 518 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 SMIM11AP58511 58 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 VBP1P61758 197 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 NCS1P62166 190 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 ASAH1Q13510 395 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 DGCR6Q14129 220 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 CDK10Q15131 360 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 DUSP7Q16829 419 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 C5orf46Q6UWT4 87 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 TMPRSS11AQ6ZMR5 421 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 ZNF767PQ75MW2 155 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 GDPD3Q7L5L3 318 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 CYP4Z1Q86W10 505 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 MSRB3Q8IXL7 192 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 SLC38A6Q8IZM9 456 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 TCTE3Q8IZS6 198 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 STX19Q8N4C7 294 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 LINC00471Q8N535 108 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 IQCF1Q8N6M8 205 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 NATD1Q8N6N6 113 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 BPIFCQ8NFQ6 507 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 DMBX1Q8NFW5 382 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 OR10A7Q8NGE5 316 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 OR11L1Q8NGX0 322 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 CNIH3Q8TBE1 160 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 CAPSLQ8WWF8 208 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 H1FXQ92522 213 aaKnown RBP2.79□□□□□ -1.96
VPS13B-208ENST00000521037 FAM218AQ96MZ4 157 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 ATF6BQ99941 703 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 C6orf62Q9GZU0 229 aaPredicted RBP2.79□□□□□ -1.96
VPS13B-208ENST00000521037 SLC22A4Q9H015 551 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 ALX4Q9H161 411 aaPredicted RBP2.79□□□□□ -1.96
VPS13B-208ENST00000521037 WFDC10AQ9H1F0 79 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 TXNIPQ9H3M7 391 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 ZNF556Q9HAH1 456 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 CLN6Q9NWW5 311 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 IMPAD1Q9NX62 359 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms