RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 ZNF134P52741 427 aa21.35■■□□□ 1.01
COL13A1-213ENST00000520267 SELENOVP59797 346 aa21.35■■□□□ 1.01
COL13A1-213ENST00000520267 ICAM4Q14773 271 aa21.35■■□□□ 1.01
COL13A1-213ENST00000520267 FAM222BQ8WU58 562 aa21.35■■□□□ 1.01
COL13A1-213ENST00000520267 C14orf79Q96F83 325 aa21.35■■□□□ 1.01
COL13A1-213ENST00000520267 RNF7Q9UBF6 113 aa21.35■■□□□ 1.01
COL13A1-213ENST00000520267 LAMP3Q9UQV4 416 aa21.35■■□□□ 1.01
COL13A1-213ENST00000520267 ZGRF1Q86YA3 2104 aa21.34■■□□□ 1.01
COL13A1-213ENST00000520267 MARCH11A6NNE9 402 aa21.34■■□□□ 1.01
COL13A1-213ENST00000520267 F2RL2O00254 374 aa21.34■■□□□ 1.01
COL13A1-213ENST00000520267 CD55P08174 381 aa21.34■■□□□ 1.01
COL13A1-213ENST00000520267 SRP19P09132 144 aaKnown RBP21.34■■□□□ 1.01
COL13A1-213ENST00000520267 SOHLH1Q5JUK2 328 aa21.34■■□□□ 1.01
COL13A1-213ENST00000520267 Q8NA96 180 aa21.34■■□□□ 1.01
COL13A1-213ENST00000520267 CLDND2Q8NHS1 167 aa21.34■■□□□ 1.01
COL13A1-213ENST00000520267 RP1L1Q8IWN7 2480 aaPredicted RBP21.34■■□□□ 1.01
COL13A1-213ENST00000520267 NBEAQ8NFP9 2946 aa21.34■■□□□ 1.01
COL13A1-213ENST00000520267 UBE2L5PA0A1B0GUS4 154 aa21.34■■□□□ 1.01
COL13A1-213ENST00000520267 SCAF4O95104 1147 aaKnown RBP21.34■■□□□ 1.01
COL13A1-213ENST00000520267 CYB5R3P00387 301 aaPredicted RBP21.34■■□□□ 1.01
COL13A1-213ENST00000520267 CRYBA1P05813 215 aa21.34■■□□□ 1.01
COL13A1-213ENST00000520267 DAOP14920 347 aa21.34■■□□□ 1.01
COL13A1-213ENST00000520267 SPINK9Q5DT21 86 aa21.34■■□□□ 1.01
COL13A1-213ENST00000520267 UTF1Q5T230 341 aa21.34■■□□□ 1.01
COL13A1-213ENST00000520267 MRGPRGQ86SM5 289 aa21.34■■□□□ 1.01
COL13A1-213ENST00000520267 DTD1Q8TEA8 209 aa21.34■■□□□ 1.01
COL13A1-213ENST00000520267 RBMXL1Q96E39 390 aaKnown RBP21.34■■□□□ 1.01
COL13A1-213ENST00000520267 PARD6GQ9BYG4 376 aaPredicted RBP21.34■■□□□ 1.01
COL13A1-213ENST00000520267 CALYQ9NYX4 217 aa21.34■■□□□ 1.01
COL13A1-213ENST00000520267 IL19Q9UHD0 177 aa21.34■■□□□ 1.01
COL13A1-213ENST00000520267 ANKRD11Q6UB99 2663 aaPredicted RBP21.33■■□□□ 1.01
COL13A1-213ENST00000520267 FBP1P09467 338 aa21.33■■□□□ 1.01
COL13A1-213ENST00000520267 RAB2AP61019 212 aa21.33■■□□□ 1.01
COL13A1-213ENST00000520267 ZNF726P1Q15940 193 aa21.33■■□□□ 1.01
COL13A1-213ENST00000520267 RPL39P5Q59GN2 51 aa21.33■■□□□ 1.01
COL13A1-213ENST00000520267 ZNF506Q5JVG8 444 aa21.33■■□□□ 1.01
COL13A1-213ENST00000520267 R3HDM4Q96D70 268 aa21.33■■□□□ 1.01
COL13A1-213ENST00000520267 DSCAML1Q8TD84 2053 aa21.33■■□□□ 1.01
COL13A1-213ENST00000520267 FCGR3BO75015 233 aa21.32■■□□□ 1
COL13A1-213ENST00000520267 CGB3P0DN86 165 aa21.32■■□□□ 1
COL13A1-213ENST00000520267 CGB7P0DN87 165 aa21.32■■□□□ 1
COL13A1-213ENST00000520267 TAF15Q92804 592 aaKnown RBP eCLIP21.32■■□□□ 1
COL13A1-213ENST00000520267 PLCE1Q9P212 2302 aa21.32■■□□□ 1
COL13A1-213ENST00000520267 TRAV1-1A0A0B4J248 108 aa21.32■■□□□ 1
COL13A1-213ENST00000520267 PMS2P5A8MQ11 134 aa21.32■■□□□ 1
COL13A1-213ENST00000520267 M0R1X1 148 aa21.32■■□□□ 1
COL13A1-213ENST00000520267 RBMXL2O75526 392 aaKnown RBP21.32■■□□□ 1
COL13A1-213ENST00000520267 SSX7Q7RTT5 188 aa21.32■■□□□ 1
COL13A1-213ENST00000520267 FAM234AQ9H0X4 552 aa21.32■■□□□ 1
COL13A1-213ENST00000520267 OR6C3Q9NZP0 311 aa21.32■■□□□ 1
COL13A1-213ENST00000520267 SH3BGRL2Q9UJC5 107 aa21.32■■□□□ 1
COL13A1-213ENST00000520267 PUS1Q9Y606 427 aaKnown RBP eCLIP21.32■■□□□ 1
COL13A1-213ENST00000520267 HCFC1P51610 2035 aa21.32■■□□□ 1
COL13A1-213ENST00000520267 SLC31A2O15432 143 aa21.31■■□□□ 1
COL13A1-213ENST00000520267 OR9G9P0C7N8 305 aa21.31■■□□□ 1
COL13A1-213ENST00000520267 RPS16P62249 146 aaKnown RBP21.31■■□□□ 1
COL13A1-213ENST00000520267 FOXC1Q12948 553 aa21.31■■□□□ 1
COL13A1-213ENST00000520267 C17orf58Q2M2W7 97 aa21.31■■□□□ 1
COL13A1-213ENST00000520267 ZNF561Q8N587 486 aa21.31■■□□□ 1
COL13A1-213ENST00000520267 C15orf54Q8N8G6 183 aa21.31■■□□□ 1
COL13A1-213ENST00000520267 DEFB108BQ8NET1 73 aa21.31■■□□□ 1
COL13A1-213ENST00000520267 IFI27L2Q9H2X8 130 aa21.31■■□□□ 1
COL13A1-213ENST00000520267 SSUH2Q9Y2M2 353 aa21.31■■□□□ 1
COL13A1-213ENST00000520267 SERF2P84101 59 aa21.31■■□□□ 1
COL13A1-213ENST00000520267 AVPI1Q5T686 147 aa21.31■■□□□ 1
COL13A1-213ENST00000520267 STUMQ69YW2 141 aa21.31■■□□□ 1
COL13A1-213ENST00000520267 TGIF2LYQ8IUE0 185 aa21.31■■□□□ 1
COL13A1-213ENST00000520267 LEAP2Q969E1 77 aa21.31■■□□□ 1
COL13A1-213ENST00000520267 TANC2Q9HCD6 1990 aa21.31■■□□□ 1
COL13A1-213ENST00000520267 C16orf97H3BN30 126 aa21.3■■□□□ 1
COL13A1-213ENST00000520267 CEBPGP53567 150 aa21.3■■□□□ 1
COL13A1-213ENST00000520267 NUP37Q8NFH4 326 aa21.3■■□□□ 1
COL13A1-213ENST00000520267 QTRT1Q9BXR0 403 aaKnown RBP21.3■■□□□ 1
COL13A1-213ENST00000520267 PRELID3BQ9Y3B1 194 aa21.3■■□□□ 1
COL13A1-213ENST00000520267 ATMQ13315 3056 aa21.3■■□□□ 1
COL13A1-213ENST00000520267 DYSFO75923 2080 aa21.3■■□□□ 1
COL13A1-213ENST00000520267 ELLP55199 621 aaPredicted RBP21.3■■□□□ 1
COL13A1-213ENST00000520267 HNF4GQ14541 408 aa21.3■■□□□ 1
COL13A1-213ENST00000520267 LCN15Q6UWW0 184 aa21.3■■□□□ 1
COL13A1-213ENST00000520267 WFDC8Q8IUA0 241 aa21.3■■□□□ 1
COL13A1-213ENST00000520267 MBD3L1Q8WWY6 194 aa21.3■■□□□ 1
COL13A1-213ENST00000520267 SDSLQ96GA7 329 aa21.3■■□□□ 1
COL13A1-213ENST00000520267 CEBPZOSA8MTT3 80 aa21.29■■□□□ 1
COL13A1-213ENST00000520267 HSPB1P04792 205 aaKnown RBP21.29■■□□□ 1
COL13A1-213ENST00000520267 PAX6P26367 422 aa21.29■■□□□ 1
COL13A1-213ENST00000520267 TMEM108Q6UXF1 575 aa21.29■■□□□ 1
COL13A1-213ENST00000520267 C1orf229Q6ZS94 237 aaPredicted RBP21.29■■□□□ 1
COL13A1-213ENST00000520267 SPACA3Q8IXA5 215 aa21.29■■□□□ 1
COL13A1-213ENST00000520267 Q8TCH9 128 aa21.29■■□□□ 1
COL13A1-213ENST00000520267 ISOC2Q96AB3 205 aa21.29■■□□□ 1
COL13A1-213ENST00000520267 RCC1LQ96I51 464 aaKnown RBP21.29■■□□□ 1
COL13A1-213ENST00000520267 GAFA1Q96PS6 74 aa21.29■■□□□ 1
COL13A1-213ENST00000520267 DCAF16Q9NXF7 216 aa21.29■■□□□ 1
COL13A1-213ENST00000520267 ACACAQ13085 2346 aa21.29■■□□□ 1
COL13A1-213ENST00000520267 HPRT1P00492 218 aa21.29■■□□□ 1
COL13A1-213ENST00000520267 OR2B8PP59922 312 aa21.29■■□□□ 1
COL13A1-213ENST00000520267 RHEBQ15382 184 aa21.29■■□□□ 1
COL13A1-213ENST00000520267 TMEM41BQ5BJD5 291 aa21.29■■□□□ 1
COL13A1-213ENST00000520267 GFRALQ6UXV0 394 aa21.29■■□□□ 1
COL13A1-213ENST00000520267 FAM216AQ8WUB2 273 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms