RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 RPL30P62888 115 aaKnown RBP14.32□□□□□ -0.12
SDC2-205ENST00000520233 CATR1Q13166 79 aa14.32□□□□□ -0.12
SDC2-205ENST00000520233 LRRC75BQ2VPJ9 315 aa14.32□□□□□ -0.12
SDC2-205ENST00000520233 GLDNQ6ZMI3 551 aaPredicted RBP14.32□□□□□ -0.12
SDC2-205ENST00000520233 KCTD9Q7L273 389 aa14.32□□□□□ -0.12
SDC2-205ENST00000520233 CCDC71LQ8N9Z2 235 aa14.32□□□□□ -0.12
SDC2-205ENST00000520233 ENKURQ8TC29 256 aa14.32□□□□□ -0.12
SDC2-205ENST00000520233 DDB2Q92466 427 aa14.32□□□□□ -0.12
SDC2-205ENST00000520233 SSX3Q99909 188 aa14.32□□□□□ -0.12
SDC2-205ENST00000520233 PRELID3BQ9Y3B1 194 aa14.32□□□□□ -0.12
SDC2-205ENST00000520233 FAM90A9PA6NNJ1 464 aa14.31□□□□□ -0.12
SDC2-205ENST00000520233 RNF212BA8MTL3 300 aa14.31□□□□□ -0.12
SDC2-205ENST00000520233 H0YJW9 148 aa14.31□□□□□ -0.12
SDC2-205ENST00000520233 APOA2P02652 100 aa14.31□□□□□ -0.12
SDC2-205ENST00000520233 RLN1P04808 185 aa14.31□□□□□ -0.12
SDC2-205ENST00000520233 NRARPQ7Z6K4 114 aa14.31□□□□□ -0.12
SDC2-205ENST00000520233 TBC1D26Q86UD7 250 aa14.31□□□□□ -0.12
SDC2-205ENST00000520233 THNSL2Q86YJ6 484 aa14.31□□□□□ -0.12
SDC2-205ENST00000520233 SIGLECL1Q8N7X8 197 aa14.31□□□□□ -0.12
SDC2-205ENST00000520233 DUSP18Q8NEJ0 188 aa14.31□□□□□ -0.12
SDC2-205ENST00000520233 TCTEX1D2Q8WW35 142 aa14.31□□□□□ -0.12
SDC2-205ENST00000520233 GPHA2Q96T91 129 aa14.31□□□□□ -0.12
SDC2-205ENST00000520233 OCEL1Q9H607 264 aa14.31□□□□□ -0.12
SDC2-205ENST00000520233 F8P00451 2351 aa14.3□□□□□ -0.12
SDC2-205ENST00000520233 IGHV3-72A0A0B4J1Y9 119 aa14.3□□□□□ -0.12
SDC2-205ENST00000520233 MPPED1O15442 326 aa14.3□□□□□ -0.12
SDC2-205ENST00000520233 VENTXO95231 258 aa14.3□□□□□ -0.12
SDC2-205ENST00000520233 RRASP10301 218 aa14.3□□□□□ -0.12
SDC2-205ENST00000520233 IER3P46695 156 aa14.3□□□□□ -0.12
SDC2-205ENST00000520233 RAB13P51153 203 aa14.3□□□□□ -0.12
SDC2-205ENST00000520233 RBMS3Q6XE24 437 aaKnown RBP14.3□□□□□ -0.12
SDC2-205ENST00000520233 CENPSQ8N2Z9 138 aa14.3□□□□□ -0.12
SDC2-205ENST00000520233 TCTEX1D1Q8N7M0 179 aa14.3□□□□□ -0.12
SDC2-205ENST00000520233 ADAD2Q8NCV1 583 aaKnown RBP14.3□□□□□ -0.12
SDC2-205ENST00000520233 PIFOQ8TCI5 191 aa14.3□□□□□ -0.12
SDC2-205ENST00000520233 CAPSLQ8WWF8 208 aa14.3□□□□□ -0.12
SDC2-205ENST00000520233 C20orf85Q9H1P6 137 aa14.3□□□□□ -0.12
SDC2-205ENST00000520233 SLC35D1Q9NTN3 355 aa14.3□□□□□ -0.12
SDC2-205ENST00000520233 FLVCR2Q9UPI3 526 aa14.3□□□□□ -0.12
SDC2-205ENST00000520233 NUBP2Q9Y5Y2 271 aa14.3□□□□□ -0.12
SDC2-205ENST00000520233 HIVEP2P31629 2446 aa14.29□□□□□ -0.12
SDC2-205ENST00000520233 PTTG1O95997 202 aa14.29□□□□□ -0.12
SDC2-205ENST00000520233 SNRNP70P08621 437 aaKnown RBP14.29□□□□□ -0.12
SDC2-205ENST00000520233 F2RP25116 425 aa14.29□□□□□ -0.12
SDC2-205ENST00000520233 KIR2DS2P43631 304 aa14.29□□□□□ -0.12
SDC2-205ENST00000520233 EBI3Q14213 229 aa14.29□□□□□ -0.12
SDC2-205ENST00000520233 TMED4Q7Z7H5 227 aa14.29□□□□□ -0.12
SDC2-205ENST00000520233 PDPNQ86YL7 162 aa14.29□□□□□ -0.12
SDC2-205ENST00000520233 OR51H1Q8NH63 302 aa14.29□□□□□ -0.12
SDC2-205ENST00000520233 OR5R1Q8NH85 324 aa14.29□□□□□ -0.12
SDC2-205ENST00000520233 SSMEM1Q8WWF3 244 aa14.29□□□□□ -0.12
SDC2-205ENST00000520233 TMEM230Q96A57 120 aa14.29□□□□□ -0.12
SDC2-205ENST00000520233 NUDT15Q9NV35 164 aa14.29□□□□□ -0.12
SDC2-205ENST00000520233 WASHC3Q9Y3C0 194 aa14.29□□□□□ -0.12
SDC2-205ENST00000520233 CRYM-AS1A6NIL9 109 aa14.28□□□□□ -0.12
SDC2-205ENST00000520233 H3BUX3 64 aa14.28□□□□□ -0.12
SDC2-205ENST00000520233 H7C2Y5 167 aa14.28□□□□□ -0.12
SDC2-205ENST00000520233 ARPC1BO15143 372 aaKnown RBP14.28□□□□□ -0.12
SDC2-205ENST00000520233 IGKV1D-33P01593 117 aa14.28□□□□□ -0.12
SDC2-205ENST00000520233 IGKV1-33P01594 117 aa14.28□□□□□ -0.12
SDC2-205ENST00000520233 IGHV4-59P01825 116 aa14.28□□□□□ -0.12
SDC2-205ENST00000520233 FAM106CPP0CH98 169 aa14.28□□□□□ -0.12
SDC2-205ENST00000520233 AKR1C4P17516 323 aa14.28□□□□□ -0.12
SDC2-205ENST00000520233 CD24P25063 80 aa14.28□□□□□ -0.12
SDC2-205ENST00000520233 TAS2R31P59538 309 aa14.28□□□□□ -0.12
SDC2-205ENST00000520233 RTL8BQ17RB0 113 aa14.28□□□□□ -0.12
SDC2-205ENST00000520233 SLC25A42Q86VD7 318 aa14.28□□□□□ -0.12
SDC2-205ENST00000520233 OR2T10Q8NGZ9 312 aa14.28□□□□□ -0.12
SDC2-205ENST00000520233 CD300LFQ8TDQ1 290 aa14.28□□□□□ -0.12
SDC2-205ENST00000520233 ZNF418Q8TF45 676 aaPredicted RBP14.28□□□□□ -0.12
SDC2-205ENST00000520233 ZFAND2BQ8WV99 257 aa14.28□□□□□ -0.12
SDC2-205ENST00000520233 LIN7CQ9NUP9 197 aaKnown RBP14.28□□□□□ -0.12
SDC2-205ENST00000520233 TEX13DA0A0J9YY54 714 aaPredicted RBP14.27□□□□□ -0.13
SDC2-205ENST00000520233 C3orf85A0A1B0GTC6 90 aa14.27□□□□□ -0.13
SDC2-205ENST00000520233 BTBD17A6NE02 478 aa14.27□□□□□ -0.13
SDC2-205ENST00000520233 RBFOX2O43251 390 aaKnown RBP eCLIP14.27□□□□□ -0.133e-8■■■□□ 17.9
SDC2-205ENST00000520233 HOXA3O43365 443 aaPredicted RBP14.27□□□□□ -0.13
SDC2-205ENST00000520233 FCGR3BO75015 233 aa14.27□□□□□ -0.13
SDC2-205ENST00000520233 B3GALNT1O75752 331 aa14.27□□□□□ -0.13
SDC2-205ENST00000520233 MOSP00540 346 aa14.27□□□□□ -0.13
SDC2-205ENST00000520233 H2AFB2P0C5Z0 115 aa14.27□□□□□ -0.13
SDC2-205ENST00000520233 BRWD1-AS2P59051 145 aa14.27□□□□□ -0.13
SDC2-205ENST00000520233 DHODHQ02127 395 aa14.27□□□□□ -0.13
SDC2-205ENST00000520233 CBX3Q13185 183 aa14.27□□□□□ -0.13
SDC2-205ENST00000520233 HES1Q14469 280 aa14.27□□□□□ -0.13
SDC2-205ENST00000520233 RGS21Q2M5E4 152 aa14.27□□□□□ -0.13
SDC2-205ENST00000520233 TMEM128Q5BJH2 165 aa14.27□□□□□ -0.13
SDC2-205ENST00000520233 DHRS7BQ6IAN0 325 aaPredicted RBP14.27□□□□□ -0.13
SDC2-205ENST00000520233 PLET1Q6UQ28 207 aa14.27□□□□□ -0.13
SDC2-205ENST00000520233 SGPP2Q8IWX5 399 aa14.27□□□□□ -0.13
SDC2-205ENST00000520233 SPAG16Q8N0X2 631 aa14.27□□□□□ -0.13
SDC2-205ENST00000520233 ALX4Q9H161 411 aaPredicted RBP14.27□□□□□ -0.13
SDC2-205ENST00000520233 NAA60Q9H7X0 242 aa14.27□□□□□ -0.13
SDC2-205ENST00000520233 FAM212BQ9NTI7 297 aaPredicted RBP14.27□□□□□ -0.13
SDC2-205ENST00000520233 TCF19Q9Y242 345 aa14.27□□□□□ -0.13
SDC2-205ENST00000520233 POMT1Q9Y6A1 747 aa14.27□□□□□ -0.13
SDC2-205ENST00000520233 TRAV6A0A075B6T7 132 aa14.26□□□□□ -0.13
SDC2-205ENST00000520233 H0Y980 276 aa14.26□□□□□ -0.13
SDC2-205ENST00000520233 MECP2P51608 486 aaKnown RBP14.26□□□□□ -0.13
SDC2-205ENST00000520233 UBE2MP61081 183 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms