RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 UCK1Q9HA47 277 aa2.59□□□□□ -1.99
HMGB1P46-201ENST00000520062 TAS2R9Q9NYW1 312 aa2.59□□□□□ -1.99
HMGB1P46-201ENST00000520062 IL20Q9NYY1 176 aa2.59□□□□□ -1.99
HMGB1P46-201ENST00000520062 GUCA1BQ9UMX6 200 aa2.59□□□□□ -1.99
HMGB1P46-201ENST00000520062 SNX12Q9UMY4 172 aa2.59□□□□□ -1.99
HMGB1P46-201ENST00000520062 HSPE1-MOB4S4R3N1 261 aa2.59□□□□□ -1.99
HMGB1P46-201ENST00000520062 IGHV3-73A0A0B4J1V6 119 aa2.58□□□□□ -2
HMGB1P46-201ENST00000520062 OR6C6A6NF89 314 aa2.58□□□□□ -2
HMGB1P46-201ENST00000520062 C17orf51A8MQB3 221 aa2.58□□□□□ -2
HMGB1P46-201ENST00000520062 DISC1C4P0D8 188 aa2.58□□□□□ -2
HMGB1P46-201ENST00000520062 APOMO95445 188 aa2.58□□□□□ -2
HMGB1P46-201ENST00000520062 KRT75O95678 551 aa2.58□□□□□ -2
HMGB1P46-201ENST00000520062 ZNF7P17097 686 aaPredicted RBP2.58□□□□□ -2
HMGB1P46-201ENST00000520062 PSG4Q00888 419 aa2.58□□□□□ -2
HMGB1P46-201ENST00000520062 EMX1Q04741 257 aaPredicted RBP2.58□□□□□ -2
HMGB1P46-201ENST00000520062 KRTAP5-4Q6L8H1 288 aa2.58□□□□□ -2
HMGB1P46-201ENST00000520062 SMARCD3Q6STE5 483 aa2.58□□□□□ -2
HMGB1P46-201ENST00000520062 SBSNQ6UWP8 590 aa2.58□□□□□ -2
HMGB1P46-201ENST00000520062 AMTNQ6UX39 209 aa2.58□□□□□ -2
HMGB1P46-201ENST00000520062 GID4Q8IVV7 300 aa2.58□□□□□ -2
HMGB1P46-201ENST00000520062 MSRB3Q8IXL7 192 aa2.58□□□□□ -2
HMGB1P46-201ENST00000520062 LRRC34Q8IZ02 419 aa2.58□□□□□ -2
HMGB1P46-201ENST00000520062 C16orf78Q8WTQ4 265 aa2.58□□□□□ -2
HMGB1P46-201ENST00000520062 CAPZA3Q96KX2 299 aa2.58□□□□□ -2
HMGB1P46-201ENST00000520062 KLK5Q9Y337 293 aaPredicted RBP2.58□□□□□ -2
HMGB1P46-201ENST00000520062 KIF15Q9NS87 1388 aa2.58□□□□□ -2
HMGB1P46-201ENST00000520062 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.57□□□□□ -2
HMGB1P46-201ENST00000520062 TMED7-TICAM2A0A0A6YYA0 188 aa2.57□□□□□ -2
HMGB1P46-201ENST00000520062 KCNK1O00180 336 aa2.57□□□□□ -2
HMGB1P46-201ENST00000520062 NDUFB2O95178 105 aa2.57□□□□□ -2
HMGB1P46-201ENST00000520062 REG1AP05451 166 aa2.57□□□□□ -2
HMGB1P46-201ENST00000520062 UCHL3P15374 230 aa2.57□□□□□ -2
HMGB1P46-201ENST00000520062 CRYBB3P26998 211 aa2.57□□□□□ -2
HMGB1P46-201ENST00000520062 CCR7P32248 378 aa2.57□□□□□ -2
HMGB1P46-201ENST00000520062 RWDD2BP57060 319 aa2.57□□□□□ -2
HMGB1P46-201ENST00000520062 RAB5BP61020 215 aa2.57□□□□□ -2
HMGB1P46-201ENST00000520062 NAA20P61599 178 aa2.57□□□□□ -2
HMGB1P46-201ENST00000520062 SARNPP82979 210 aaKnown RBP2.57□□□□□ -2
HMGB1P46-201ENST00000520062 TNFRSF9Q07011 255 aa2.57□□□□□ -2
HMGB1P46-201ENST00000520062 RSU1Q15404 277 aa2.57□□□□□ -2
HMGB1P46-201ENST00000520062 FAM229BQ4G0N7 80 aa2.57□□□□□ -2
HMGB1P46-201ENST00000520062 OR10K2Q6IF99 312 aa2.57□□□□□ -2
HMGB1P46-201ENST00000520062 PP632Q6XCG6 107 aa2.57□□□□□ -2
HMGB1P46-201ENST00000520062 BRD3OSQ6XYD6 125 aa2.57□□□□□ -2
HMGB1P46-201ENST00000520062 ZNF565Q8N9K5 539 aa2.57□□□□□ -2
HMGB1P46-201ENST00000520062 STACQ99469 402 aa2.57□□□□□ -2
HMGB1P46-201ENST00000520062 C16orf95Q9H693 158 aa2.57□□□□□ -2
HMGB1P46-201ENST00000520062 SLC2A9Q9NRM0 540 aa2.57□□□□□ -2
HMGB1P46-201ENST00000520062 FKBP14Q9NWM8 211 aa2.57□□□□□ -2
HMGB1P46-201ENST00000520062 TXNL4BQ9NX01 149 aaKnown RBP2.57□□□□□ -2
HMGB1P46-201ENST00000520062 C19orf71A6NCJ1 209 aa2.56□□□□□ -2
HMGB1P46-201ENST00000520062 UBFD1O14562 309 aaKnown RBP2.56□□□□□ -2
HMGB1P46-201ENST00000520062 HLA-DQB2P05538 268 aa2.56□□□□□ -2
HMGB1P46-201ENST00000520062 CCL3P10147 92 aa2.56□□□□□ -2
HMGB1P46-201ENST00000520062 CRHBPP24387 322 aa2.56□□□□□ -2
HMGB1P46-201ENST00000520062 GZMMP51124 257 aa2.56□□□□□ -2
HMGB1P46-201ENST00000520062 CEBPGP53567 150 aa2.56□□□□□ -2
HMGB1P46-201ENST00000520062 HIST3H3Q16695 136 aa2.56□□□□□ -2
HMGB1P46-201ENST00000520062 ACSM3Q53FZ2 586 aa2.56□□□□□ -2
HMGB1P46-201ENST00000520062 C1orf194Q5T5A4 169 aa2.56□□□□□ -2
HMGB1P46-201ENST00000520062 ZNF322Q6U7Q0 402 aaPredicted RBP2.56□□□□□ -2
HMGB1P46-201ENST00000520062 ASB17Q8WXJ9 295 aa2.56□□□□□ -2
HMGB1P46-201ENST00000520062 C8orf76Q96K31 380 aa2.56□□□□□ -2
HMGB1P46-201ENST00000520062 OR52B2Q96RD2 323 aa2.56□□□□□ -2
HMGB1P46-201ENST00000520062 AICDAQ9GZX7 198 aa2.56□□□□□ -2
HMGB1P46-201ENST00000520062 XPNPEP1Q9NQW7 623 aa2.56□□□□□ -2
HMGB1P46-201ENST00000520062 PSORS1C2Q9UIG4 136 aa2.56□□□□□ -2
HMGB1P46-201ENST00000520062 EVC2Q86UK5 1308 aa2.56□□□□□ -2
HMGB1P46-201ENST00000520062 GOLGA6L19H0YKK7 550 aa2.55□□□□□ -2
HMGB1P46-201ENST00000520062 HIST1H1EP10412 219 aaKnown RBP2.55□□□□□ -2
HMGB1P46-201ENST00000520062 CPMP14384 443 aa2.55□□□□□ -2
HMGB1P46-201ENST00000520062 FUSP35637 526 aaKnown RBP eCLIP2.55□□□□□ -2
HMGB1P46-201ENST00000520062 TCL1AP56279 114 aa2.55□□□□□ -2
HMGB1P46-201ENST00000520062 SYPL2Q5VXT5 272 aa2.55□□□□□ -2
HMGB1P46-201ENST00000520062 SFXN4Q6P4A7 337 aa2.55□□□□□ -2
HMGB1P46-201ENST00000520062 C5orf46Q6UWT4 87 aa2.55□□□□□ -2
HMGB1P46-201ENST00000520062 HIST2H3AQ71DI3 136 aa2.55□□□□□ -2
HMGB1P46-201ENST00000520062 ZNF550Q7Z398 422 aa2.55□□□□□ -2
HMGB1P46-201ENST00000520062 OR1M1Q8NGA1 313 aa2.55□□□□□ -2
HMGB1P46-201ENST00000520062 OR4K13Q8NH42 304 aa2.55□□□□□ -2
HMGB1P46-201ENST00000520062 C20orf166-AS1Q96NR2 134 aa2.55□□□□□ -2
HMGB1P46-201ENST00000520062 CCL13Q99616 98 aa2.55□□□□□ -2
HMGB1P46-201ENST00000520062 LSM5Q9Y4Y9 91 aaKnown RBP2.55□□□□□ -2
HMGB1P46-201ENST00000520062 TRPM3Q9HCF6 1732 aaPredicted RBP2.54□□□□□ -2
HMGB1P46-201ENST00000520062 A0A1B0GW54 56 aa2.54□□□□□ -2
HMGB1P46-201ENST00000520062 EVPLLA8MZ36 301 aa2.54□□□□□ -2
HMGB1P46-201ENST00000520062 ZNF73O43830 326 aaPredicted RBP2.54□□□□□ -2
HMGB1P46-201ENST00000520062 SOD1P00441 154 aa2.54□□□□□ -2
HMGB1P46-201ENST00000520062 CD200P41217 278 aa2.54□□□□□ -2
HMGB1P46-201ENST00000520062 SLCO1A2P46721 670 aa2.54□□□□□ -2
HMGB1P46-201ENST00000520062 MARCKSL1P49006 195 aa2.54□□□□□ -2
HMGB1P46-201ENST00000520062 FKBP1AP62942 108 aaKnown RBP2.54□□□□□ -2
HMGB1P46-201ENST00000520062 LRRC75BQ2VPJ9 315 aa2.54□□□□□ -2
HMGB1P46-201ENST00000520062 TMEM176BQ3YBM2 270 aaPredicted RBP2.54□□□□□ -2
HMGB1P46-201ENST00000520062 DIRAS2Q96HU8 199 aa2.54□□□□□ -2
HMGB1P46-201ENST00000520062 OR51I1Q9H343 314 aa2.54□□□□□ -2
HMGB1P46-201ENST00000520062 LRRC19Q9H756 370 aa2.54□□□□□ -2
HMGB1P46-201ENST00000520062 CACNA1DQ01668 2161 aa2.53□□□□□ -2
HMGB1P46-201ENST00000520062 IGHV3-15A0A0B4J1V0 119 aa2.53□□□□□ -2
HMGB1P46-201ENST00000520062 OR11H12B2RN74 326 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms