RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 OR6M1Q8NGM8 313 aa6.61□□□□□ -1.35
PABPC1-213ENST00000519848 DPF1Q92782 380 aa6.61□□□□□ -1.35
PABPC1-213ENST00000519848 MYCBPQ99417 103 aaPredicted RBP6.61□□□□□ -1.35
PABPC1-213ENST00000519848 THAP7Q9BT49 309 aaPredicted RBP6.61□□□□□ -1.35
PABPC1-213ENST00000519848 MND1Q9BWT6 205 aa6.61□□□□□ -1.35
PABPC1-213ENST00000519848 CST11Q9H112 138 aa6.61□□□□□ -1.35
PABPC1-213ENST00000519848 METTL1Q9UBP6 276 aaKnown RBP6.61□□□□□ -1.35
PABPC1-213ENST00000519848 ZNF230Q9UIE0 474 aaPredicted RBP6.61□□□□□ -1.35
PABPC1-213ENST00000519848 FOXA2Q9Y261 457 aaPredicted RBP6.61□□□□□ -1.35
PABPC1-213ENST00000519848 VSIG4Q9Y279 399 aa6.61□□□□□ -1.35
PABPC1-213ENST00000519848 LINC00473A8K010 186 aa6.6□□□□□ -1.35
PABPC1-213ENST00000519848 H3BUI4 141 aa6.6□□□□□ -1.35
PABPC1-213ENST00000519848 RAB27BO00194 218 aa6.6□□□□□ -1.35
PABPC1-213ENST00000519848 SLC25A17O43808 307 aa6.6□□□□□ -1.35
PABPC1-213ENST00000519848 FCGR3AP08637 254 aa6.6□□□□□ -1.35
PABPC1-213ENST00000519848 CPEP16870 476 aa6.6□□□□□ -1.35
PABPC1-213ENST00000519848 MAPK3P27361 379 aaPredicted RBP6.6□□□□□ -1.35
PABPC1-213ENST00000519848 DYRK1AQ13627 763 aa6.6□□□□□ -1.35
PABPC1-213ENST00000519848 FAM71F2Q6NXP2 309 aa6.6□□□□□ -1.35
PABPC1-213ENST00000519848 CD200R1LQ6Q8B3 271 aa6.6□□□□□ -1.35
PABPC1-213ENST00000519848 GRPEL2Q8TAA5 225 aa6.6□□□□□ -1.35
PABPC1-213ENST00000519848 DDB2Q92466 427 aa6.6□□□□□ -1.35
PABPC1-213ENST00000519848 PTX4Q96A99 478 aa6.6□□□□□ -1.35
PABPC1-213ENST00000519848 RHOVQ96L33 236 aa6.6□□□□□ -1.35
PABPC1-213ENST00000519848 NEDD4LQ96PU5 975 aa6.6□□□□□ -1.35
PABPC1-213ENST00000519848 CABLES2Q9BTV7 478 aa6.6□□□□□ -1.35
PABPC1-213ENST00000519848 CHCHD3Q9NX63 227 aaKnown RBP6.6□□□□□ -1.35
PABPC1-213ENST00000519848 RDH8Q9NYR8 311 aa6.6□□□□□ -1.35
PABPC1-213ENST00000519848 KCNIP1Q9NZI2 227 aa6.6□□□□□ -1.35
PABPC1-213ENST00000519848 GHRLQ9UBU3 117 aa6.6□□□□□ -1.35
PABPC1-213ENST00000519848 ERGIC3Q9Y282 383 aa6.6□□□□□ -1.35
PABPC1-213ENST00000519848 WASHC3Q9Y3C0 194 aa6.6□□□□□ -1.35
PABPC1-213ENST00000519848 SELENOKQ9Y6D0 94 aa6.6□□□□□ -1.35
PABPC1-213ENST00000519848 BIRC6Q9NR09 4857 aa6.6□□□□□ -1.35
PABPC1-213ENST00000519848 CSMD3Q7Z407 3707 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 OR5H14A6NHG9 310 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 M0R1X1 148 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 RAB29O14966 203 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 RAMP3O60896 148 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 SAP30O75446 220 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 LY86O95711 162 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 IGLV2-14P01704 120 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 PRH1P02810 166 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 OR8U8P0C7N1 319 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 GSTT2P0CG29 244 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 GSTT2BP0CG30 244 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 UBBP0CG47 229 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 HSMCR30P0CW71 290 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 GP9P14770 177 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 MYOD1P15172 320 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 GNB3P16520 340 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 CALRP27797 417 aaKnown RBP6.59□□□□□ -1.35
PABPC1-213ENST00000519848 CEACAM6P40199 344 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 BRWD1-AS2P59051 145 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 TAGLNQ01995 201 aaKnown RBP6.59□□□□□ -1.35
PABPC1-213ENST00000519848 ZNF45Q02386 682 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 MLLT11Q13015 90 aaPredicted RBP6.59□□□□□ -1.35
PABPC1-213ENST00000519848 C2orf76Q3KRA6 126 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 GLT8D1Q68CQ7 371 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 UNQ5815/PRO19632Q6UWF5 114 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 IDO2Q6ZQW0 420 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 PPP1R27Q86WC6 154 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 C10orf67Q8IYJ2 551 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 KCNG3Q8TAE7 436 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 FAM3DQ96BQ1 224 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 RCHY1Q96PM5 261 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 GPHA2Q96T91 129 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 GPR61Q9BZJ8 451 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 OR2D2Q9H210 308 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 CHMP1AQ9HD42 196 aaPredicted RBP6.59□□□□□ -1.35
PABPC1-213ENST00000519848 RETNQ9HD89 108 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 C12orf4Q9NQ89 552 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 C8orf4Q9NR00 106 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 PLEKHJ1Q9NW61 149 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 SDHAF2Q9NX18 166 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 HSF4Q9ULV5 492 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 DMRT1Q9Y5R6 373 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 TNCP24821 2201 aa6.59□□□□□ -1.35
PABPC1-213ENST00000519848 SORL1Q92673 2214 aa6.58□□□□□ -1.36
PABPC1-213ENST00000519848 IGKV1D-13A0A0B4J2D9 117 aa6.58□□□□□ -1.36
PABPC1-213ENST00000519848 ANKRD34BA5PLL1 514 aa6.58□□□□□ -1.36
PABPC1-213ENST00000519848 E7EUB6 86 aa6.58□□□□□ -1.36
PABPC1-213ENST00000519848 LINC01619G3V211 115 aa6.58□□□□□ -1.36
PABPC1-213ENST00000519848 ITGB1BP1O14713 200 aa6.58□□□□□ -1.36
PABPC1-213ENST00000519848 SSX5O60225 188 aa6.58□□□□□ -1.36
PABPC1-213ENST00000519848 IGLV1-51P01701 117 aa6.58□□□□□ -1.36
PABPC1-213ENST00000519848 IGKV1-13P0DP09 117 aa6.58□□□□□ -1.36
PABPC1-213ENST00000519848 PTHLHP12272 177 aa6.58□□□□□ -1.36
PABPC1-213ENST00000519848 TPPP2P59282 170 aa6.58□□□□□ -1.36
PABPC1-213ENST00000519848 RPL30P62888 115 aaKnown RBP6.58□□□□□ -1.36
PABPC1-213ENST00000519848 MED21Q13503 144 aa6.58□□□□□ -1.36
PABPC1-213ENST00000519848 RAB11BQ15907 218 aa6.58□□□□□ -1.36
PABPC1-213ENST00000519848 SRSF7Q16629 238 aaKnown RBP eCLIP6.58□□□□□ -1.36
PABPC1-213ENST00000519848 ACTBL2Q562R1 376 aa6.58□□□□□ -1.36
PABPC1-213ENST00000519848 CASC10Q5T4H9 136 aa6.58□□□□□ -1.36
PABPC1-213ENST00000519848 ZNF660Q6AZW8 331 aaPredicted RBP6.58□□□□□ -1.36
PABPC1-213ENST00000519848 MOB1BQ7L9L4 216 aa6.58□□□□□ -1.36
PABPC1-213ENST00000519848 MS4A15Q8N5U1 240 aa6.58□□□□□ -1.36
PABPC1-213ENST00000519848 OR5T1Q8NG75 326 aa6.58□□□□□ -1.36
PABPC1-213ENST00000519848 UFD1Q92890 307 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms