RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	RAB9B	Q9NP90	201 aa		10.24	□□□□□ -0.77
SPIDR-210	ENST00000519362	DCAF16	Q9NXF7	216 aa		10.24	□□□□□ -0.77
SPIDR-210	ENST00000519362	CLN8	Q9UBY8	286 aa		10.24	□□□□□ -0.77
SPIDR-210	ENST00000519362	MARCH11	A6NNE9	402 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	IFNA5	P01569	189 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	TNFRSF1A	P19438	455 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	HBG1	P69891	147 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	HBG2	P69892	147 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	CCL8	P80075	99 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	PEA15	Q15121	130 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	AARD	Q4LEZ3	155 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	SPANXN5	Q5MJ07	72 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	UTF1	Q5T230	341 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	DPPA3	Q6W0C5	159 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	H2BFWT	Q7Z2G1	175 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	DEFB108B	Q8NET1	73 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	WFIKKN1	Q96NZ8	548 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	PARD6G	Q9BYG4	376 aa	Predicted RBP	10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	LINC00574	Q9H8X3	128 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	GFOD1	Q9NXC2	390 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	SPTBN2	O15020	2390 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	RBFOX2	O43251	390 aa	Known RBP eCLIP	10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	HPRT1	P00492	218 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	GYPA	P02724	150 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	OR8U8	P0C7N1	319 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	IRF2	P14316	349 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	NPBWR1	P48145	328 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	UCN	P55089	124 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	THNSL2	Q86YJ6	484 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	FAM216B	Q8N7L0	139 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	CORO2A	Q92828	525 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	CCL13	Q99616	98 aa		10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	RAI1	Q7Z5J4	1906 aa	Predicted RBP	10.23	□□□□□ -0.77
SPIDR-210	ENST00000519362	USF3	Q68DE3	2245 aa		10.22	□□□□□ -0.77
SPIDR-210	ENST00000519362	TRGV10	A0A0A0MS01	117 aa		10.22	□□□□□ -0.77
SPIDR-210	ENST00000519362	BTBD17	A6NE02	478 aa		10.22	□□□□□ -0.77
SPIDR-210	ENST00000519362	ATXN7	O15265	892 aa	Predicted RBP	10.22	□□□□□ -0.77
SPIDR-210	ENST00000519362	SLC31A2	O15432	143 aa		10.22	□□□□□ -0.77
SPIDR-210	ENST00000519362	RAB7A	P51149	207 aa		10.22	□□□□□ -0.77
SPIDR-210	ENST00000519362	LRRC75B	Q2VPJ9	315 aa		10.22	□□□□□ -0.77
SPIDR-210	ENST00000519362	RPL39P5	Q59GN2	51 aa		10.22	□□□□□ -0.77
SPIDR-210	ENST00000519362	AKR1C8P	Q5T2L2	129 aa		10.22	□□□□□ -0.77
SPIDR-210	ENST00000519362	DHRS7B	Q6IAN0	325 aa	Predicted RBP	10.22	□□□□□ -0.77
SPIDR-210	ENST00000519362	ADAM5	Q6NVV9	412 aa		10.22	□□□□□ -0.77
SPIDR-210	ENST00000519362	C1orf229	Q6ZS94	237 aa	Predicted RBP	10.22	□□□□□ -0.77
SPIDR-210	ENST00000519362	DDB2	Q92466	427 aa		10.22	□□□□□ -0.77
SPIDR-210	ENST00000519362	R3HDM4	Q96D70	268 aa		10.22	□□□□□ -0.77
SPIDR-210	ENST00000519362	PSMG3	Q9BT73	122 aa	Predicted RBP	10.22	□□□□□ -0.77
SPIDR-210	ENST00000519362	PBDC1	Q9BVG4	233 aa		10.22	□□□□□ -0.77
SPIDR-210	ENST00000519362	SMDT1	Q9H4I9	107 aa		10.22	□□□□□ -0.77
SPIDR-210	ENST00000519362	FBXO7	Q9Y3I1	522 aa		10.22	□□□□□ -0.77
SPIDR-210	ENST00000519362	KPTN	Q9Y664	436 aa		10.22	□□□□□ -0.77
SPIDR-210	ENST00000519362	NCOR2	Q9Y618	2525 aa		10.22	□□□□□ -0.77
SPIDR-210	ENST00000519362	PLCE1	Q9P212	2302 aa		10.22	□□□□□ -0.77
SPIDR-210	ENST00000519362	DYSF	O75923	2080 aa		10.22	□□□□□ -0.77
SPIDR-210	ENST00000519362	DSCAML1	Q8TD84	2053 aa		10.22	□□□□□ -0.77
SPIDR-210	ENST00000519362	FAM90A9P	A6NNJ1	464 aa		10.21	□□□□□ -0.77
SPIDR-210	ENST00000519362	PMS2P5	A8MQ11	134 aa		10.21	□□□□□ -0.77
SPIDR-210	ENST00000519362		M0R1X1	148 aa		10.21	□□□□□ -0.77
SPIDR-210	ENST00000519362	GPR37	O15354	613 aa		10.21	□□□□□ -0.77
SPIDR-210	ENST00000519362	ZG16	O60844	167 aa		10.21	□□□□□ -0.77
SPIDR-210	ENST00000519362	FCGR3B	O75015	233 aa		10.21	□□□□□ -0.77
SPIDR-210	ENST00000519362	IGHV3-7	P01780	117 aa		10.21	□□□□□ -0.77
SPIDR-210	ENST00000519362	H2AFB1	P0C5Y9	115 aa		10.21	□□□□□ -0.77
SPIDR-210	ENST00000519362	PPT1	P50897	306 aa		10.21	□□□□□ -0.77
SPIDR-210	ENST00000519362	CCL20	P78556	96 aa		10.21	□□□□□ -0.77
SPIDR-210	ENST00000519362	CT45A1	Q5HYN5	189 aa		10.21	□□□□□ -0.77
SPIDR-210	ENST00000519362	SLC25A24	Q6NUK1	477 aa		10.21	□□□□□ -0.77
SPIDR-210	ENST00000519362	ZCCHC24	Q8N2G6	241 aa	Known RBP	10.21	□□□□□ -0.77
SPIDR-210	ENST00000519362	ZNF439	Q8NDP4	499 aa		10.21	□□□□□ -0.77
SPIDR-210	ENST00000519362	CT45A3	Q8NHU0	189 aa		10.21	□□□□□ -0.77
SPIDR-210	ENST00000519362	SCGB1C1	Q8TD33	95 aa		10.21	□□□□□ -0.77
SPIDR-210	ENST00000519362	DTD1	Q8TEA8	209 aa		10.21	□□□□□ -0.77
SPIDR-210	ENST00000519362	OR4C12	Q96R67	309 aa		10.21	□□□□□ -0.77
SPIDR-210	ENST00000519362	RSG1	Q9BU20	258 aa		10.21	□□□□□ -0.77
SPIDR-210	ENST00000519362	WDR61	Q9GZS3	305 aa	Known RBP	10.21	□□□□□ -0.77
SPIDR-210	ENST00000519362	EIF5A2	Q9GZV4	153 aa	Known RBP	10.21	□□□□□ -0.77
SPIDR-210	ENST00000519362	NGB	Q9NPG2	151 aa		10.21	□□□□□ -0.77
SPIDR-210	ENST00000519362	RAX	Q9Y2V3	346 aa		10.21	□□□□□ -0.77
SPIDR-210	ENST00000519362	RP1L1	Q8IWN7	2480 aa	Predicted RBP	10.21	□□□□□ -0.77
SPIDR-210	ENST00000519362	PIEZO2	Q9H5I5	2752 aa		10.21	□□□□□ -0.78
SPIDR-210	ENST00000519362	ZNF729	A6NN14	1252 aa	Predicted RBP	10.21	□□□□□ -0.78
SPIDR-210	ENST00000519362	SHISA9	B4DS77	424 aa		10.21	□□□□□ -0.78
SPIDR-210	ENST00000519362	TLE1	Q04724	770 aa		10.21	□□□□□ -0.78
SPIDR-210	ENST00000519362	TLE4	Q04727	773 aa		10.21	□□□□□ -0.78
SPIDR-210	ENST00000519362	SLC38A11	Q08AI6	406 aa		10.21	□□□□□ -0.78
SPIDR-210	ENST00000519362	TMEM30B	Q3MIR4	351 aa		10.21	□□□□□ -0.78
SPIDR-210	ENST00000519362	NCMAP	Q5T1S8	102 aa		10.21	□□□□□ -0.78
SPIDR-210	ENST00000519362	DMRTC2	Q8IXT2	367 aa	Predicted RBP	10.21	□□□□□ -0.78
SPIDR-210	ENST00000519362	LILRB2	Q8N423	598 aa		10.21	□□□□□ -0.78
SPIDR-210	ENST00000519362	KDF1	Q8NAX2	398 aa	Predicted RBP	10.21	□□□□□ -0.78
SPIDR-210	ENST00000519362	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	10.21	□□□□□ -0.78
SPIDR-210	ENST00000519362	CLRN3	Q8NCR9	226 aa		10.21	□□□□□ -0.78
SPIDR-210	ENST00000519362	ZDHHC16	Q969W1	377 aa		10.21	□□□□□ -0.78
SPIDR-210	ENST00000519362	CIB3	Q96Q77	187 aa	Predicted RBP	10.21	□□□□□ -0.78
SPIDR-210	ENST00000519362	ZNF251	Q9BRH9	671 aa		10.21	□□□□□ -0.78
SPIDR-210	ENST00000519362	NBEA	Q8NFP9	2946 aa		10.2	□□□□□ -0.78
SPIDR-210	ENST00000519362	CEP295	Q9C0D2	2601 aa		10.2	□□□□□ -0.78
SPIDR-210	ENST00000519362	TRAV1-1	A0A0B4J248	108 aa		10.2	□□□□□ -0.78
SPIDR-210	ENST00000519362		A0A1B0GV50	99 aa		10.2	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms