RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 CA5AP35218 305 aa1.11□□□□□ -2.23
SKP1-205ENST00000519054 ATP5J2P56134 94 aa1.11□□□□□ -2.23
SKP1-205ENST00000519054 ARPP19P56211 112 aa1.11□□□□□ -2.23
SKP1-205ENST00000519054 DYNLL1P63167 89 aaKnown RBP1.11□□□□□ -2.23
SKP1-205ENST00000519054 CCL7P80098 99 aa1.11□□□□□ -2.23
SKP1-205ENST00000519054 CDNFQ49AH0 187 aa1.11□□□□□ -2.23
SKP1-205ENST00000519054 SETD3Q86TU7 594 aaPredicted RBP1.11□□□□□ -2.23
SKP1-205ENST00000519054 OR4K13Q8NH42 304 aa1.11□□□□□ -2.23
SKP1-205ENST00000519054 TMED9Q9BVK6 235 aa1.11□□□□□ -2.23
SKP1-205ENST00000519054 ASB7Q9H672 318 aa1.11□□□□□ -2.23
SKP1-205ENST00000519054 ARMC7Q9H6L4 198 aa1.11□□□□□ -2.23
SKP1-205ENST00000519054 TUBA4BQ9H853 241 aa1.11□□□□□ -2.23
SKP1-205ENST00000519054 ZNF286AQ9HBT8 521 aa1.11□□□□□ -2.23
SKP1-205ENST00000519054 DDIT4Q9NX09 232 aa1.11□□□□□ -2.23
SKP1-205ENST00000519054 NAGKQ9UJ70 344 aa1.11□□□□□ -2.23
SKP1-205ENST00000519054 MALRD1Q5VYJ5 2156 aa1.11□□□□□ -2.23
SKP1-205ENST00000519054 ROCK2O75116 1388 aaKnown RBP1.1□□□□□ -2.23
SKP1-205ENST00000519054 CENPXA8MT69 81 aa1.1□□□□□ -2.23
SKP1-205ENST00000519054 ETHE1O95571 254 aa1.1□□□□□ -2.23
SKP1-205ENST00000519054 APODP05090 189 aa1.1□□□□□ -2.23
SKP1-205ENST00000519054 ZNF22P17026 224 aaPredicted RBP1.1□□□□□ -2.23
SKP1-205ENST00000519054 RPL31P62899 125 aaKnown RBP1.1□□□□□ -2.23
SKP1-205ENST00000519054 SLC35B1P78383 322 aa1.1□□□□□ -2.23
SKP1-205ENST00000519054 ST3GAL4Q11206 333 aa1.1□□□□□ -2.23
SKP1-205ENST00000519054 PDGFRLQ15198 375 aa1.1□□□□□ -2.23
SKP1-205ENST00000519054 CST6Q15828 149 aa1.1□□□□□ -2.23
SKP1-205ENST00000519054 SSX1Q16384 188 aa1.1□□□□□ -2.23
SKP1-205ENST00000519054 BCL2A1Q16548 175 aa1.1□□□□□ -2.23
SKP1-205ENST00000519054 CLEC12BQ2HXU8 276 aa1.1□□□□□ -2.23
SKP1-205ENST00000519054 TTMPQ5BVD1 217 aa1.1□□□□□ -2.23
SKP1-205ENST00000519054 Q6ZS92 163 aa1.1□□□□□ -2.23
SKP1-205ENST00000519054 LYZL2Q7Z4W2 148 aa1.1□□□□□ -2.23
SKP1-205ENST00000519054 HS3ST5Q8IZT8 346 aa1.1□□□□□ -2.23
SKP1-205ENST00000519054 CCNYL1Q8N7R7 359 aa1.1□□□□□ -2.23
SKP1-205ENST00000519054 FAM184AQ8NB25 1140 aa1.1□□□□□ -2.23
SKP1-205ENST00000519054 ZNF738Q8NE65 137 aa1.1□□□□□ -2.23
SKP1-205ENST00000519054 OR51A7Q8NH64 312 aa1.1□□□□□ -2.23
SKP1-205ENST00000519054 LMX1AQ8TE12 382 aa1.1□□□□□ -2.23
SKP1-205ENST00000519054 B9D2Q9BPU9 175 aa1.1□□□□□ -2.23
SKP1-205ENST00000519054 MAP1LC3CQ9BXW4 147 aa1.1□□□□□ -2.23
SKP1-205ENST00000519054 LRRC19Q9H756 370 aa1.1□□□□□ -2.23
SKP1-205ENST00000519054 CHRAC1Q9NRG0 131 aa1.1□□□□□ -2.23
SKP1-205ENST00000519054 MPDZO75970 2070 aa1.1□□□□□ -2.23
SKP1-205ENST00000519054 ANK1P16157 1881 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 IGKV1D-37A0A075B6S9 117 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 A0A0J9YYE9 177 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 A6NED7 52 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 K7EN84 100 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 M0R1B8 84 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 TRBC1P01850 177 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 OR5AL1P0C617 328 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 CGB3P0DN86 165 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 CGB7P0DN87 165 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 CD9P21926 228 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 IMPA1P29218 277 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 SRP14P37108 136 aaKnown RBP1.09□□□□□ -2.23
SKP1-205ENST00000519054 PSMC5P62195 406 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 FOXF1Q12946 379 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 DYNC1I2Q13409 638 aaKnown RBP1.09□□□□□ -2.23
SKP1-205ENST00000519054 ATP6V1FQ16864 119 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 TMEM249Q2WGJ8 235 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 DEFB133Q30KQ1 61 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 NDUFAF6Q330K2 333 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 FAM27D1Q5T7N8 215 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 ZNF773Q6PK81 442 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 FAM19A1Q7Z5A9 133 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 LINC00596Q86U02 117 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 OR8K1Q8NGG5 319 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 RNASE11Q8TAA1 199 aaKnown RBP1.09□□□□□ -2.23
SKP1-205ENST00000519054 UBA3Q8TBC4 463 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 ZFAND1Q8TCF1 268 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 CENPNQ96H22 339 aaPredicted RBP1.09□□□□□ -2.23
SKP1-205ENST00000519054 METTL26Q96S19 204 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 CCL19Q99731 98 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 ANP32EQ9BTT0 268 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 C6orf50Q9HD87 102 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 FADS3Q9Y5Q0 445 aa1.09□□□□□ -2.23
SKP1-205ENST00000519054 NAV1Q8NEY1 1877 aa1.09□□□□□ -2.24
SKP1-205ENST00000519054 ABCB11O95342 1321 aa1.09□□□□□ -2.24
SKP1-205ENST00000519054 PTPRJQ12913 1337 aa1.09□□□□□ -2.24
SKP1-205ENST00000519054 MYH3P11055 1940 aa1.09□□□□□ -2.24
SKP1-205ENST00000519054 ZNF638Q14966 1978 aaKnown RBP1.08□□□□□ -2.24
SKP1-205ENST00000519054 PLXNA2O75051 1894 aa1.08□□□□□ -2.24
SKP1-205ENST00000519054 LOC389332A0A1B0GUA5 103 aa1.08□□□□□ -2.24
SKP1-205ENST00000519054 ANKRD20A5PA0PJZ0 165 aa1.08□□□□□ -2.24
SKP1-205ENST00000519054 RNF113AO15541 343 aaKnown RBP1.08□□□□□ -2.24
SKP1-205ENST00000519054 COX7A2P2O60397 106 aa1.08□□□□□ -2.24
SKP1-205ENST00000519054 ALOX12BO75342 701 aa1.08□□□□□ -2.24
SKP1-205ENST00000519054 VAPBO95292 243 aa1.08□□□□□ -2.24
SKP1-205ENST00000519054 MBP02144 154 aa1.08□□□□□ -2.24
SKP1-205ENST00000519054 KRTAP2-3P0C7H8 128 aa1.08□□□□□ -2.24
SKP1-205ENST00000519054 CTLA4P16410 223 aa1.08□□□□□ -2.24
SKP1-205ENST00000519054 HTR2BP41595 481 aa1.08□□□□□ -2.24
SKP1-205ENST00000519054 XIAPP98170 497 aa1.08□□□□□ -2.24
SKP1-205ENST00000519054 PSG4Q00888 419 aa1.08□□□□□ -2.24
SKP1-205ENST00000519054 IFFO1Q0D2I5 559 aa1.08□□□□□ -2.24
SKP1-205ENST00000519054 TOMM34Q15785 309 aaPredicted RBP1.08□□□□□ -2.24
SKP1-205ENST00000519054 TAL2Q16559 108 aa1.08□□□□□ -2.24
SKP1-205ENST00000519054 SLC25A25Q6KCM7 469 aa1.08□□□□□ -2.24
SKP1-205ENST00000519054 NOXRED1Q6NXP6 359 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms