RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 ZNF728P0DKX0 622 aa1.56□□□□□ -2.16
SQLE-202ENST00000518604 SERPINB10P48595 397 aa1.56□□□□□ -2.16
SQLE-202ENST00000518604 HPCAP84074 193 aa1.56□□□□□ -2.16
SQLE-202ENST00000518604 HOXC5Q00444 222 aa1.56□□□□□ -2.16
SQLE-202ENST00000518604 MGAT3Q09327 533 aa1.56□□□□□ -2.16
SQLE-202ENST00000518604 HSP90B2PQ58FF3 399 aa1.56□□□□□ -2.16
SQLE-202ENST00000518604 DRAM2Q6UX65 266 aa1.56□□□□□ -2.16
SQLE-202ENST00000518604 Q6ZS52 159 aa1.56□□□□□ -2.16
SQLE-202ENST00000518604 FAM19A5Q7Z5A7 132 aaPredicted RBP1.56□□□□□ -2.16
SQLE-202ENST00000518604 LHFPL1Q86WI0 220 aa1.56□□□□□ -2.16
SQLE-202ENST00000518604 OR4X2Q8NGF9 303 aa1.56□□□□□ -2.16
SQLE-202ENST00000518604 CLDND2Q8NHS1 167 aa1.56□□□□□ -2.16
SQLE-202ENST00000518604 SLC37A2Q8TED4 501 aa1.56□□□□□ -2.16
SQLE-202ENST00000518604 FGF13Q92913 245 aa1.56□□□□□ -2.16
SQLE-202ENST00000518604 SLC35G5Q96KT7 338 aa1.56□□□□□ -2.16
SQLE-202ENST00000518604 PACRGQ96M98 296 aaPredicted RBP1.56□□□□□ -2.16
SQLE-202ENST00000518604 DHRS9Q9BPW9 319 aa1.56□□□□□ -2.16
SQLE-202ENST00000518604 SLC2A9Q9NRM0 540 aa1.56□□□□□ -2.16
SQLE-202ENST00000518604 HDGFL3Q9Y3E1 203 aa1.56□□□□□ -2.16
SQLE-202ENST00000518604 PCYT1BQ9Y5K3 369 aaPredicted RBP1.56□□□□□ -2.16
SQLE-202ENST00000518604 OTOGLQ3ZCN5 2332 aa1.56□□□□□ -2.16
SQLE-202ENST00000518604 TRPM6Q9BX84 2022 aa1.56□□□□□ -2.16
SQLE-202ENST00000518604 M0R381 172 aa1.55□□□□□ -2.16
SQLE-202ENST00000518604 NPYP01303 97 aa1.55□□□□□ -2.16
SQLE-202ENST00000518604 RBM11P57052 281 aaKnown RBP1.55□□□□□ -2.16
SQLE-202ENST00000518604 TAS2R30P59541 319 aa1.55□□□□□ -2.16
SQLE-202ENST00000518604 RELAQ04206 551 aa1.55□□□□□ -2.16
SQLE-202ENST00000518604 TPRXLQ17RH7 258 aa1.55□□□□□ -2.16
SQLE-202ENST00000518604 TMEM31Q5JXX7 168 aa1.55□□□□□ -2.16
SQLE-202ENST00000518604 PLEKHG7Q6ZR37 379 aa1.55□□□□□ -2.16
SQLE-202ENST00000518604 Q6ZTI0 123 aa1.55□□□□□ -2.16
SQLE-202ENST00000518604 BAP18Q8IXM2 172 aa1.55□□□□□ -2.16
SQLE-202ENST00000518604 LRRC34Q8IZ02 419 aa1.55□□□□□ -2.16
SQLE-202ENST00000518604 ASB13Q8WXK3 278 aa1.55□□□□□ -2.16
SQLE-202ENST00000518604 TIPINQ9BVW5 301 aa1.55□□□□□ -2.16
SQLE-202ENST00000518604 TMEM222Q9H0R3 208 aa1.55□□□□□ -2.16
SQLE-202ENST00000518604 TRGV5A0A0B4J1U4 118 aa1.54□□□□□ -2.16
SQLE-202ENST00000518604 C5orf49A4QMS7 147 aa1.54□□□□□ -2.16
SQLE-202ENST00000518604 FABP12A6NFH5 140 aa1.54□□□□□ -2.16
SQLE-202ENST00000518604 CLDN12P56749 244 aa1.54□□□□□ -2.16
SQLE-202ENST00000518604 TMEM33P57088 247 aa1.54□□□□□ -2.16
SQLE-202ENST00000518604 RPS24P62847 133 aaKnown RBP1.54□□□□□ -2.16
SQLE-202ENST00000518604 GNA13Q14344 377 aa1.54□□□□□ -2.16
SQLE-202ENST00000518604 UAP1Q16222 522 aaPredicted RBP1.54□□□□□ -2.16
SQLE-202ENST00000518604 N4BP2L1Q5TBK1 243 aaPredicted RBP1.54□□□□□ -2.16
SQLE-202ENST00000518604 FUNDC1Q8IVP5 155 aa1.54□□□□□ -2.16
SQLE-202ENST00000518604 C1orf174Q8IYL3 243 aa1.54□□□□□ -2.16
SQLE-202ENST00000518604 RIBC1Q8N443 379 aaPredicted RBP1.54□□□□□ -2.16
SQLE-202ENST00000518604 OR5J2Q8NH18 312 aa1.54□□□□□ -2.16
SQLE-202ENST00000518604 SMCR5Q8TEV8 140 aa1.54□□□□□ -2.16
SQLE-202ENST00000518604 SMIM19Q96E16 107 aa1.54□□□□□ -2.16
SQLE-202ENST00000518604 ZNF514Q96K75 400 aaPredicted RBP1.54□□□□□ -2.16
SQLE-202ENST00000518604 C7orf50Q9BRJ6 194 aaKnown RBP1.54□□□□□ -2.16
SQLE-202ENST00000518604 LLPHQ9BRT6 129 aaKnown RBP1.54□□□□□ -2.16
SQLE-202ENST00000518604 NSRP1Q9H0G5 558 aaKnown RBP1.54□□□□□ -2.16
SQLE-202ENST00000518604 MS4A6AQ9H2W1 248 aa1.54□□□□□ -2.16
SQLE-202ENST00000518604 HES4Q9HCC6 221 aa1.54□□□□□ -2.16
SQLE-202ENST00000518604 DENND4BO75064 1496 aaPredicted RBP1.54□□□□□ -2.16
SQLE-202ENST00000518604 CHD2O14647 1828 aaKnown RBP1.54□□□□□ -2.16
SQLE-202ENST00000518604 A0A1W2PQD3 144 aa1.53□□□□□ -2.16
SQLE-202ENST00000518604 OR6C6A6NF89 314 aa1.53□□□□□ -2.16
SQLE-202ENST00000518604 J3QQQ9 107 aa1.53□□□□□ -2.16
SQLE-202ENST00000518604 ATP8B1O43520 1251 aa1.53□□□□□ -2.16
SQLE-202ENST00000518604 ADAP1O75689 374 aa1.53□□□□□ -2.16
SQLE-202ENST00000518604 IL6P05231 212 aa1.53□□□□□ -2.16
SQLE-202ENST00000518604 CXCL2P19875 107 aa1.53□□□□□ -2.16
SQLE-202ENST00000518604 CXCL3P19876 107 aa1.53□□□□□ -2.16
SQLE-202ENST00000518604 RPL27AP46776 148 aaKnown RBP1.53□□□□□ -2.16
SQLE-202ENST00000518604 RPL26P61254 145 aaKnown RBP1.53□□□□□ -2.16
SQLE-202ENST00000518604 GNA12Q03113 381 aa1.53□□□□□ -2.16
SQLE-202ENST00000518604 RPS4Y2Q8TD47 263 aa1.53□□□□□ -2.16
SQLE-202ENST00000518604 ZNF532Q9HCE3 1301 aa1.53□□□□□ -2.16
SQLE-202ENST00000518604 RPL26L1Q9UNX3 145 aaKnown RBP1.53□□□□□ -2.16
SQLE-202ENST00000518604 GRIN2BQ13224 1484 aa1.52□□□□□ -2.17
SQLE-202ENST00000518604 TRAV41A0A0B4J266 112 aa1.52□□□□□ -2.17
SQLE-202ENST00000518604 TINCRA0A1B0GVN0 87 aa1.52□□□□□ -2.17
SQLE-202ENST00000518604 BHLHE40O14503 412 aa1.52□□□□□ -2.17
SQLE-202ENST00000518604 BIRC5O15392 142 aa1.52□□□□□ -2.17
SQLE-202ENST00000518604 YEATS4O95619 227 aa1.52□□□□□ -2.17
SQLE-202ENST00000518604 GPX1P07203 203 aa1.52□□□□□ -2.17
SQLE-202ENST00000518604 DDTP30046 118 aa1.52□□□□□ -2.17
SQLE-202ENST00000518604 PEBP1P30086 187 aaKnown RBP1.52□□□□□ -2.17
SQLE-202ENST00000518604 IFNGR2P38484 337 aa1.52□□□□□ -2.17
SQLE-202ENST00000518604 GABRA2P47869 451 aa1.52□□□□□ -2.17
SQLE-202ENST00000518604 RPL14P50914 215 aaKnown RBP1.52□□□□□ -2.17
SQLE-202ENST00000518604 RAP1GDS1P52306 607 aa1.52□□□□□ -2.17
SQLE-202ENST00000518604 TBPL1P62380 186 aa1.52□□□□□ -2.17
SQLE-202ENST00000518604 FKBP1AP62942 108 aaKnown RBP1.52□□□□□ -2.17
SQLE-202ENST00000518604 HLA-DRB3P79483 266 aa1.52□□□□□ -2.17
SQLE-202ENST00000518604 ERHP84090 104 aaKnown RBP1.52□□□□□ -2.17
SQLE-202ENST00000518604 PLPPR5Q32ZL2 321 aa1.52□□□□□ -2.17
SQLE-202ENST00000518604 LGALS9BQ3B8N2 356 aa1.52□□□□□ -2.17
SQLE-202ENST00000518604 PDPK2PQ6A1A2 396 aa1.52□□□□□ -2.17
SQLE-202ENST00000518604 SLC35E3Q7Z769 313 aa1.52□□□□□ -2.17
SQLE-202ENST00000518604 FAM9CQ8IZT9 166 aa1.52□□□□□ -2.17
SQLE-202ENST00000518604 Q8N402 240 aa1.52□□□□□ -2.17
SQLE-202ENST00000518604 DAND5Q8N907 189 aa1.52□□□□□ -2.17
SQLE-202ENST00000518604 TIMM21Q9BVV7 248 aa1.52□□□□□ -2.17
SQLE-202ENST00000518604 IMP3Q9NV31 184 aaKnown RBP1.52□□□□□ -2.17
SQLE-202ENST00000518604 EURLQ9NYK6 297 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms