RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 WSB1Q9Y6I7 421 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 DSCAML1Q8TD84 2053 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 PVALEFA0A1B0GWK0 134 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 FAM168BA1KXE4 195 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 IZUMO1RA6ND01 250 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 TVP23AA6NH52 213 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 BTNL10A8MVZ5 291 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 HACD1B0YJ81 288 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 H7C0C1 242 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 PSIP1O75475 530 aaKnown RBP2.11□□□□□ -2.07
CPNE3-204ENST00000517862 MMP23AO75900 390 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 FSTL3O95633 263 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 C6orf47O95873 294 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 PTTG1O95997 202 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 GNAO1P09471 354 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 PGA4P0DJD7 388 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 PGA3P0DJD8 388 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 CD37P11049 281 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 NQO2P16083 231 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 ZBTB25P24278 435 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 IVDP26440 423 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 HTR2CP28335 458 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 CEACAM3P40198 252 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 STX17P56962 302 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 UBE2KP61086 200 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 CACNG7P62955 275 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 KIAA0040Q15053 153 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 PSG5Q15238 335 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 TNXAQ16473 311 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 C18orf21Q32NC0 220 aaPredicted RBP2.11□□□□□ -2.07
CPNE3-204ENST00000517862 GCSAMLQ5JQS6 135 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 UTF1Q5T230 341 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 ZNF691Q5VV52 312 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 HCP5Q6MZN7 132 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 DNAJC24Q6P3W2 148 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 AGTRAPQ6RW13 159 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 AAED1Q7RTV5 226 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 Q8N402 240 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 C20orf203Q8NBC4 194 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 LY6G5BQ8NDX9 201 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 CCDC54Q8NEL0 328 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 OR2L5Q8NG80 312 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 OR2Z1Q8NG97 314 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 OR10AD1Q8NGE0 317 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 TMEM230Q96A57 120 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 CIDECQ96AQ7 238 aaPredicted RBP2.11□□□□□ -2.07
CPNE3-204ENST00000517862 ZHX1-C8orf76Q96EF9 292 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 C16orf74Q96GX8 76 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 LINC01600Q96MT4 127 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 EBPLQ9BY08 206 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 ZNF355PQ9NSJ1 428 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 MTFP1Q9UDX5 166 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 ENPP5Q9UJA9 477 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 HYOU1Q9Y4L1 999 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 AMMECR1Q9Y4X0 333 aaPredicted RBP2.11□□□□□ -2.07
CPNE3-204ENST00000517862 GMEB1Q9Y692 573 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 V9GYY9 64 aa2.11□□□□□ -2.07
CPNE3-204ENST00000517862 MUC17Q685J3 4493 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 ERI2A8K979 691 aaKnown RBP2.1□□□□□ -2.07
CPNE3-204ENST00000517862 I3L521 148 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 CETN3O15182 167 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 SMC2O95347 1197 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 RAB36O95755 333 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 GCGP01275 180 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 IGLV2-8P01709 118 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 SERPINE1P05121 402 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 FABP3P05413 133 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 DNAH10OSP0CZ25 163 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 IGHV3-43DP0DP04 118 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 MPV17P39210 176 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 MT1HP80294 61 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 STX3Q13277 289 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 UNC119Q13432 240 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 C5orf64Q2M2E5 130 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 RFX4Q33E94 735 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 ATP6AP1LQ52LC2 224 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 TRMT12Q53H54 448 aaKnown RBP2.1□□□□□ -2.07
CPNE3-204ENST00000517862 TMEM255AQ5JRV8 349 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 UBE2UQ5VVX9 321 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 PTRHD1Q6GMV3 140 aaKnown RBP2.1□□□□□ -2.07
CPNE3-204ENST00000517862 FAM45BPQ6NSW5 357 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 ERICH5Q6P6B1 374 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 ARL9Q6T311 187 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 FAM9CQ8IZT9 166 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 SYS1Q8N2H4 156 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 STPG2Q8N412 459 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 ZNF485Q8NCK3 441 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 OR51G1Q8NGK1 321 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 OR10J6PQ8NGY7 276 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 OR2G3Q8NGZ4 309 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 ZNRF2Q8NHG8 242 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 FAM45AQ8TCE6 357 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 NRBF2Q96F24 287 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 CENPNQ96H22 339 aaPredicted RBP2.1□□□□□ -2.07
CPNE3-204ENST00000517862 TMEM101Q96IK0 257 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 MCEEQ96PE7 176 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 OR2V2Q96R30 315 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 SH3GL3Q99963 347 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 LLPHQ9BRT6 129 aaKnown RBP2.1□□□□□ -2.07
CPNE3-204ENST00000517862 C1orf198Q9H425 327 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms