RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 EMX1Q04741 257 aaPredicted RBP2.25□□□□□ -2.05
SKP1-204ENST00000517691 TPBGQ13641 420 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 MEF2DQ14814 521 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 ATXN7L3Q14CW9 347 aaPredicted RBP2.25□□□□□ -2.05
SKP1-204ENST00000517691 RSU1Q15404 277 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 KISS1Q15726 138 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 SMIM21Q3B7S5 101 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 ZNF404Q494X3 552 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 Q499Y3 187 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 ACSM3Q53FZ2 586 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 YIF1BQ5BJH7 314 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 Q6ZPA2 131 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 UTS2BQ765I0 119 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 CEACAM19Q7Z692 300 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 GLCCI1Q86VQ1 547 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 CALHM1Q8IU99 346 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 JAGN1Q8N5M9 183 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 MS4A15Q8N5U1 240 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 ZNF485Q8NCK3 441 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 OR4F17Q8NGA8 305 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 OR10Z1Q8NGY1 313 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 OR4F5Q8NH21 305 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 LGALS14Q8TCE9 139 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 H1FXQ92522 213 aaKnown RBP2.25□□□□□ -2.05
SKP1-204ENST00000517691 RGP1Q92546 391 aaPredicted RBP2.25□□□□□ -2.05
SKP1-204ENST00000517691 CREB3L1Q96BA8 519 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 CEP19Q96LK0 163 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 OR4F4Q96R69 305 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 S100A13Q99584 98 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 MGLLQ99685 303 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 TLNRD1Q9H1K6 362 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 PATZ1Q9HBE1 687 aaKnown RBP2.25□□□□□ -2.05
SKP1-204ENST00000517691 TMEM138Q9NPI0 162 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 ZC4H2Q9NQZ6 224 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 RASL12Q9NYN1 266 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 PLCE1Q9P212 2302 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 OR5V1Q9UGF6 321 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 ZNF221Q9UK13 617 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 KCNS2Q9ULS6 477 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 RAI1Q7Z5J4 1906 aaPredicted RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 NIPBLQ6KC79 2804 aaeCLIP2.24□□□□□ -2.05
SKP1-204ENST00000517691 IGKV1-27A0A075B6S5 117 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 A0A0G2JMP0 313 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 TRBV5-5A0A0J9YX44 114 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 A0A0X1KG70 313 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 A0A1B0GW55 424 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 RFPL4AA6NLU0 287 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 OR2AT4A6NND4 320 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 SRRM5B3KS81 715 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 RFPL4AL1F8VTS6 287 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 DVL1O14640 695 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 NDUFB3O43676 98 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 ANGPTL7O43827 346 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 CDRT1O95170 752 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 ALDOBP05062 364 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 NHLRC4P0CG21 123 aaPredicted RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 DUX4L2P0CJ85 424 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 DUX4L3P0CJ86 424 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 DUX4L4P0CJ87 422 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 DUX4L5P0CJ88 424 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 DUX4L6P0CJ89 424 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 DUX4L7P0CJ90 424 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 PET100P0DJ07 73 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 PGA5P0DJD9 388 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 PSG2P11465 335 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 MGMTP16455 207 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 BCL3P20749 454 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 AADACP22760 399 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 GABRR1P24046 479 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 MAS1LP35410 378 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 ZNF93P35789 620 aaPredicted RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 SRP14P37108 136 aaKnown RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 GABARAPL2P60520 117 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 RPS25P62851 125 aaKnown RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 RBM39Q14498 530 aaKnown RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 INSL4Q14641 139 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 OPCMLQ14982 345 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 NEDD8Q15843 81 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 CTF1Q16619 201 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 SLC22A6Q4U2R8 563 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 HSD17B12Q53GQ0 312 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 LRRC10Q5BKY1 277 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 FFAR4Q5NUL3 377 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 FAM120AOSQ5T036 256 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 DDI2Q5TDH0 399 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 TEX36Q5VZQ5 186 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 STUMQ69YW2 141 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 ZNF773Q6PK81 442 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 DUX4L9Q6RFH8 374 aaPredicted RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 BTNL3Q6UXE8 466 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 ACP7Q6ZNF0 438 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 SLC36A1Q7Z2H8 476 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 Q8IYB0 196 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 CMTM1Q8IZ96 169 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 FAM216BQ8N7L0 139 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 PNLDC1Q8NA58 520 aaKnown RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 NECAP1Q8NC96 275 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 ZNRF1Q8ND25 227 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 DMBX1Q8NFW5 382 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 OR4M2Q8NGB6 313 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms