RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 K7EPK0 472 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 M0R1W7 72 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ST8SIA3O43173 380 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ENSAO43768 121 aaKnown RBP6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 FCGR3BO75015 233 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 TSC22D2O75157 780 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 OR2F2O95006 317 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 S1PR2O95136 353 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 HPRT1P00492 218 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 KRASP01116 189 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 IGKV1-5P01602 117 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 MBPP02686 304 aaPredicted RBP6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 SLC25A6P12236 298 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 LYL1P12980 280 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 COL8A1P27658 744 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 SSTR2P30874 369 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 S100A11P31949 105 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 NKX2-1P43699 371 aaPredicted RBP6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 PRRX1P54821 245 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 BRWD1-AS2P59051 145 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 LINC00205P59089 165 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 OR2F1Q13607 317 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ZNF345Q14585 488 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 OPCMLQ14982 345 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ZNF787Q6DD87 383 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 FAM71F2Q6NXP2 309 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ACOT7LQ6ZUV0 252 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 TMUB2Q71RG4 321 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 FAM219AQ8IW50 185 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ABHD12Q8N2K0 398 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 FAM71E2Q8N5Q1 922 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 OR4D5Q8NGN0 318 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 OR4S2Q8NH73 311 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 OR1S1Q8NH92 325 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 CLDND2Q8NHS1 167 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 C10orf105Q8TEF2 133 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 DDB2Q92466 427 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 NRGNQ92686 78 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 TMEM186Q96B77 213 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 GPR146Q96CH1 333 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 PERPQ96FX8 193 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 RNF126Q9BV68 326 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 CLEC7AQ9BXN2 247 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 GON7Q9BXV9 100 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ARL6Q9H0F7 186 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 SLA2Q9H6Q3 261 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 PLEKHA2Q9HB19 425 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 OR5AC2Q9NZP5 309 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ZNRD1Q9P1U0 126 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 CACNG5Q9UF02 275 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 MMP24Q9Y5R2 645 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 USP9YO00507 2555 aaPredicted RBP6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 TENM4Q6N022 2769 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 TACC2O95359 2948 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ANKRD17O75179 2603 aaKnown RBP6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 IGHV2-26A0A0B4J1V2 119 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 A0A0G2JRQ6 117 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 RNF222A6NCQ9 220 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 KIAA1324LA8MWY0 1029 aaPredicted RBP6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 A8MXK9 166 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 E5RGE8 158 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 WRBO00258 174 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 FOXH1O75593 365 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 DEDDO75618 318 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 APOA2P02652 100 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 PAX1P15863 534 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 PVALBP20472 110 aaPredicted RBP6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 COX7A1P24310 79 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 G6PCP35575 357 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ZNF137PP52743 207 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 AP2S1P53680 142 aaPredicted RBP6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 DSCR9P59020 149 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ERVK-16P61578 105 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 LMO4P61968 165 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ARF6P62330 175 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 TAGLNQ01995 201 aaKnown RBP6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ID3Q02535 119 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 RTL8BQ17RB0 113 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 DHRS7BQ6IAN0 325 aaPredicted RBP6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 C1orf229Q6ZS94 237 aaPredicted RBP6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 H2BFWTQ7Z2G1 175 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 KCNRGQ8N5I3 272 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 KIR3DL3Q8N743 410 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ZNF383Q8NA42 475 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 BEND2Q8NDZ0 799 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 OR13D1Q8NGV5 346 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 R3HDM4Q96D70 268 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 GSX2Q9BZM3 304 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 SLC35D1Q9NTN3 355 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 RCL1Q9Y2P8 373 aaKnown RBP6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 NSG2Q9Y328 171 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 AMMECR1Q9Y4X0 333 aaPredicted RBP6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 POMT1Q9Y6A1 747 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 DOPEY2Q9Y3R5 2298 aa6.23□□□□□ -1.41
SCARNA20.1-201ENST00000516009 WNK2Q9Y3S1 2297 aa6.22□□□□□ -1.41
SCARNA20.1-201ENST00000516009 IGHV2-70DA0A0C4DH43 119 aa6.22□□□□□ -1.41
SCARNA20.1-201ENST00000516009 KANTRA0A1W2PQU2 76 aa6.22□□□□□ -1.41
SCARNA20.1-201ENST00000516009 MARCH11A6NNE9 402 aa6.22□□□□□ -1.41
SCARNA20.1-201ENST00000516009 VWC2LB2RUY7 222 aa6.22□□□□□ -1.41
SCARNA20.1-201ENST00000516009 FAM90A26D6RGX4 464 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms