RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 SIGLECL1Q8N7X8 197 aa16.88■□□□□ 0.29
LSM6-207ENST00000515311 ZNF383Q8NA42 475 aa16.88■□□□□ 0.29
LSM6-207ENST00000515311 DDB2Q92466 427 aa16.88■□□□□ 0.29
LSM6-207ENST00000515311 SSX3Q99909 188 aa16.88■□□□□ 0.29
LSM6-207ENST00000515311 DPAGT1Q9H3H5 408 aa16.88■□□□□ 0.29
LSM6-207ENST00000515311 C5orf66Q9H5L9 145 aa16.88■□□□□ 0.29
LSM6-207ENST00000515311 COPZ2Q9P299 210 aa16.88■□□□□ 0.29
LSM6-207ENST00000515311 VSIG4Q9Y279 399 aa16.88■□□□□ 0.29
LSM6-207ENST00000515311 FAM240BA0A1B0GVZ2 78 aa16.87■□□□□ 0.29
LSM6-207ENST00000515311 FAM90A9PA6NNJ1 464 aa16.87■□□□□ 0.29
LSM6-207ENST00000515311 H0YJW9 148 aa16.87■□□□□ 0.29
LSM6-207ENST00000515311 PGLYRP1O75594 196 aaPredicted RBP16.87■□□□□ 0.29
LSM6-207ENST00000515311 PI3P19957 117 aa16.87■□□□□ 0.29
LSM6-207ENST00000515311 PIGPP57054 158 aa16.87■□□□□ 0.29
LSM6-207ENST00000515311 CATR1Q13166 79 aa16.87■□□□□ 0.29
LSM6-207ENST00000515311 RBMS3Q6XE24 437 aaKnown RBP16.87■□□□□ 0.29
LSM6-207ENST00000515311 CCDC71LQ8N9Z2 235 aa16.87■□□□□ 0.29
LSM6-207ENST00000515311 POC5Q8NA72 575 aa16.87■□□□□ 0.29
LSM6-207ENST00000515311 SSMEM1Q8WWF3 244 aa16.87■□□□□ 0.29
LSM6-207ENST00000515311 RTBDNQ9BSG5 229 aaPredicted RBP16.87■□□□□ 0.29
LSM6-207ENST00000515311 LINC00473A8K010 186 aa16.86■□□□□ 0.29
LSM6-207ENST00000515311 TNFSF12O43508 249 aa16.86■□□□□ 0.29
LSM6-207ENST00000515311 APOA2P02652 100 aa16.86■□□□□ 0.29
LSM6-207ENST00000515311 RLN1P04808 185 aa16.86■□□□□ 0.29
LSM6-207ENST00000515311 IER3P46695 156 aa16.86■□□□□ 0.29
LSM6-207ENST00000515311 RAB13P51153 203 aa16.86■□□□□ 0.29
LSM6-207ENST00000515311 RPL30P62888 115 aaKnown RBP16.86■□□□□ 0.29
LSM6-207ENST00000515311 THNSL2Q86YJ6 484 aa16.86■□□□□ 0.29
LSM6-207ENST00000515311 OR5R1Q8NH85 324 aa16.86■□□□□ 0.29
LSM6-207ENST00000515311 PIFOQ8TCI5 191 aa16.86■□□□□ 0.29
LSM6-207ENST00000515311 GPHA2Q96T91 129 aa16.86■□□□□ 0.29
LSM6-207ENST00000515311 PRELID3BQ9Y3B1 194 aa16.86■□□□□ 0.29
LSM6-207ENST00000515311 WASHC3Q9Y3C0 194 aa16.86■□□□□ 0.29
LSM6-207ENST00000515311 VENTXO95231 258 aa16.85■□□□□ 0.29
LSM6-207ENST00000515311 FAM106CPP0CH98 169 aa16.85■□□□□ 0.29
LSM6-207ENST00000515311 RRASP10301 218 aa16.85■□□□□ 0.29
LSM6-207ENST00000515311 LINC00205P59089 165 aa16.85■□□□□ 0.29
LSM6-207ENST00000515311 EBI3Q14213 229 aa16.85■□□□□ 0.29
LSM6-207ENST00000515311 RTL8BQ17RB0 113 aa16.85■□□□□ 0.29
LSM6-207ENST00000515311 GLDNQ6ZMI3 551 aaPredicted RBP16.85■□□□□ 0.29
LSM6-207ENST00000515311 PDPNQ86YL7 162 aa16.85■□□□□ 0.29
LSM6-207ENST00000515311 TMEM86BQ8N661 226 aa16.85■□□□□ 0.29
LSM6-207ENST00000515311 ENKURQ8TC29 256 aa16.85■□□□□ 0.29
LSM6-207ENST00000515311 ZNF418Q8TF45 676 aaPredicted RBP16.85■□□□□ 0.29
LSM6-207ENST00000515311 TCTEX1D2Q8WW35 142 aa16.85■□□□□ 0.29
LSM6-207ENST00000515311 OCEL1Q9H607 264 aa16.85■□□□□ 0.29
LSM6-207ENST00000515311 LIN7CQ9NUP9 197 aaKnown RBP16.85■□□□□ 0.29
LSM6-207ENST00000515311 POMT1Q9Y6A1 747 aa16.85■□□□□ 0.29
LSM6-207ENST00000515311 NIPBLQ6KC79 2804 aaeCLIP16.84■□□□□ 0.29
LSM6-207ENST00000515311 IGHV3-72A0A0B4J1Y9 119 aa16.84■□□□□ 0.29
LSM6-207ENST00000515311 H3BUX3 64 aa16.84■□□□□ 0.29
LSM6-207ENST00000515311 MPPED1O15442 326 aa16.84■□□□□ 0.29
LSM6-207ENST00000515311 IGHV4-59P01825 116 aa16.84■□□□□ 0.29
LSM6-207ENST00000515311 TCRBP04435 133 aa16.84■□□□□ 0.29
LSM6-207ENST00000515311 SNRNP70P08621 437 aaKnown RBP16.84■□□□□ 0.29
LSM6-207ENST00000515311 F2RP25116 425 aa16.84■□□□□ 0.29
LSM6-207ENST00000515311 KIR2DS2P43631 304 aa16.84■□□□□ 0.29
LSM6-207ENST00000515311 DHRS7BQ6IAN0 325 aaPredicted RBP16.84■□□□□ 0.29
LSM6-207ENST00000515311 NRARPQ7Z6K4 114 aa16.84■□□□□ 0.29
LSM6-207ENST00000515311 TBC1D26Q86UD7 250 aa16.84■□□□□ 0.29
LSM6-207ENST00000515311 TCTEX1D1Q8N7M0 179 aa16.84■□□□□ 0.29
LSM6-207ENST00000515311 OR51H1Q8NH63 302 aa16.84■□□□□ 0.29
LSM6-207ENST00000515311 CAPSLQ8WWF8 208 aa16.84■□□□□ 0.29
LSM6-207ENST00000515311 SLC35D1Q9NTN3 355 aa16.84■□□□□ 0.29
LSM6-207ENST00000515311 BTBD17A6NE02 478 aa16.83■□□□□ 0.28
LSM6-207ENST00000515311 H7C2Y5 167 aa16.83■□□□□ 0.28
LSM6-207ENST00000515311 RBFOX2O43251 390 aaKnown RBP eCLIP16.83■□□□□ 0.28
LSM6-207ENST00000515311 HOXA3O43365 443 aaPredicted RBP16.83■□□□□ 0.28
LSM6-207ENST00000515311 PTTG1O95997 202 aa16.83■□□□□ 0.28
LSM6-207ENST00000515311 IGKV1D-33P01593 117 aa16.83■□□□□ 0.28
LSM6-207ENST00000515311 IGKV1-33P01594 117 aa16.83■□□□□ 0.28
LSM6-207ENST00000515311 CBX3Q13185 183 aa16.83■□□□□ 0.28
LSM6-207ENST00000515311 CENPSQ8N2Z9 138 aa16.83■□□□□ 0.28
LSM6-207ENST00000515311 DUSP18Q8NEJ0 188 aa16.83■□□□□ 0.28
LSM6-207ENST00000515311 OR2T10Q8NGZ9 312 aa16.83■□□□□ 0.28
LSM6-207ENST00000515311 CD300LFQ8TDQ1 290 aa16.83■□□□□ 0.28
LSM6-207ENST00000515311 C20orf85Q9H1P6 137 aa16.83■□□□□ 0.28
LSM6-207ENST00000515311 FAM212BQ9NTI7 297 aaPredicted RBP16.83■□□□□ 0.28
LSM6-207ENST00000515311 PITPNC1Q9UKF7 332 aa16.83■□□□□ 0.28
LSM6-207ENST00000515311 CRYM-AS1A6NIL9 109 aa16.82■□□□□ 0.28
LSM6-207ENST00000515311 B3GALNT1O75752 331 aa16.82■□□□□ 0.28
LSM6-207ENST00000515311 MOSP00540 346 aa16.82■□□□□ 0.28
LSM6-207ENST00000515311 CD24P25063 80 aa16.82■□□□□ 0.28
LSM6-207ENST00000515311 TAS2R31P59538 309 aa16.82■□□□□ 0.28
LSM6-207ENST00000515311 UBE2MP61081 183 aaKnown RBP16.82■□□□□ 0.28
LSM6-207ENST00000515311 TMED4Q7Z7H5 227 aa16.82■□□□□ 0.28
LSM6-207ENST00000515311 ADAD2Q8NCV1 583 aaKnown RBP16.82■□□□□ 0.28
LSM6-207ENST00000515311 OR4S2Q8NH73 311 aa16.82■□□□□ 0.28
LSM6-207ENST00000515311 TMEM230Q96A57 120 aa16.82■□□□□ 0.28
LSM6-207ENST00000515311 NUDT15Q9NV35 164 aa16.82■□□□□ 0.28
LSM6-207ENST00000515311 TCF19Q9Y242 345 aa16.82■□□□□ 0.28
LSM6-207ENST00000515311 NUBP2Q9Y5Y2 271 aa16.82■□□□□ 0.28
LSM6-207ENST00000515311 A0A0A6YYJ9 748 aa16.81■□□□□ 0.28
LSM6-207ENST00000515311 H0Y980 276 aa16.81■□□□□ 0.28
LSM6-207ENST00000515311 CLDN34H7C241 214 aa16.81■□□□□ 0.28
LSM6-207ENST00000515311 FCGR3BO75015 233 aa16.81■□□□□ 0.28
LSM6-207ENST00000515311 IGKV1-16P04430 117 aa16.81■□□□□ 0.28
LSM6-207ENST00000515311 BRWD1-AS2P59051 145 aa16.81■□□□□ 0.28
LSM6-207ENST00000515311 HILS1P60008 231 aa16.81■□□□□ 0.28
LSM6-207ENST00000515311 HES1Q14469 280 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms