RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 SRSF7Q16629 238 aaKnown RBP eCLIP8.11□□□□□ -1.11
HMGXB3-205ENST00000514469 DEFB121Q5J5C9 76 aa8.11□□□□□ -1.11
HMGXB3-205ENST00000514469 PYHIN1Q6K0P9 492 aa8.11□□□□□ -1.11
HMGXB3-205ENST00000514469 ZNF562Q6V9R5 426 aa8.11□□□□□ -1.11
HMGXB3-205ENST00000514469 Q6ZS49 121 aa8.11□□□□□ -1.11
HMGXB3-205ENST00000514469 OR1N2Q8NGR9 330 aa8.11□□□□□ -1.11
HMGXB3-205ENST00000514469 OR10J5Q8NHC4 309 aa8.11□□□□□ -1.11
HMGXB3-205ENST00000514469 MAFIPQ8WZ33 124 aa8.11□□□□□ -1.11
HMGXB3-205ENST00000514469 FCGR1BQ92637 280 aa8.11□□□□□ -1.11
HMGXB3-205ENST00000514469 OR5B12Q96R08 314 aa8.11□□□□□ -1.11
HMGXB3-205ENST00000514469 TSNAXQ99598 290 aaKnown RBP8.11□□□□□ -1.11
HMGXB3-205ENST00000514469 B9D2Q9BPU9 175 aa8.11□□□□□ -1.11
HMGXB3-205ENST00000514469 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.11□□□□□ -1.11
HMGXB3-205ENST00000514469 TPSG1Q9NRR2 321 aa8.11□□□□□ -1.11
HMGXB3-205ENST00000514469 TXNL4BQ9NX01 149 aaKnown RBP8.11□□□□□ -1.11
HMGXB3-205ENST00000514469 SDHAF2Q9NX18 166 aa8.11□□□□□ -1.11
HMGXB3-205ENST00000514469 ZNF230Q9UIE0 474 aaPredicted RBP8.11□□□□□ -1.11
HMGXB3-205ENST00000514469 SCOCQ9UIL1 159 aa8.11□□□□□ -1.11
HMGXB3-205ENST00000514469 A3GALT2U3KPV4 340 aa8.11□□□□□ -1.11
HMGXB3-205ENST00000514469 A0A075B6Q4 140 aa8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 SMIM30A4D0T7 59 aa8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 METTL21EPA6NDL7 271 aa8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 NOTOA8MTQ0 251 aa8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 IGLV2-23P01705 113 aa8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 LGALS1P09382 135 aaKnown RBP8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 OR8U9P0C7N5 309 aa8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 PSMB9P28065 219 aa8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 SSBP2P81877 361 aaPredicted RBP8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 CD69Q07108 199 aa8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 TMEM267Q0VDI3 215 aaPredicted RBP8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 AKIRIN2Q53H80 203 aa8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 C11orf87Q6NUJ2 197 aa8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 PPP1R27Q86WC6 154 aa8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 ABHD5Q8WTS1 349 aa8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 CASTOR1Q8WTX7 329 aa8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 ARPC1AQ92747 370 aa8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 FLYWCH2Q96CP2 140 aaKnown RBP8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 CLCC1Q96S66 551 aa8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 FAM103A1Q9BTL3 118 aaKnown RBP8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 YTHDF1Q9BYJ9 559 aaKnown RBP8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 ALX4Q9H161 411 aaPredicted RBP8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 Q9H521 79 aa8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 SLC35D1Q9NTN3 355 aa8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 STUB1Q9UNE7 303 aa8.1□□□□□ -1.11
HMGXB3-205ENST00000514469 IGKV1D-8A0A087WSZ0 117 aa8.09□□□□□ -1.11
HMGXB3-205ENST00000514469 LINC01619G3V211 115 aa8.09□□□□□ -1.11
HMGXB3-205ENST00000514469 ARPC1BO15143 372 aaKnown RBP8.09□□□□□ -1.11
HMGXB3-205ENST00000514469 SLC25A17O43808 307 aa8.09□□□□□ -1.11
HMGXB3-205ENST00000514469 DTYMKP23919 212 aa8.09□□□□□ -1.11
HMGXB3-205ENST00000514469 INSL3P51460 131 aa8.09□□□□□ -1.11
HMGXB3-205ENST00000514469 RPS16P62249 146 aaKnown RBP8.09□□□□□ -1.11
HMGXB3-205ENST00000514469 ARFRP1Q13795 201 aa8.09□□□□□ -1.11
HMGXB3-205ENST00000514469 ARL6IP1Q15041 203 aa8.09□□□□□ -1.11
HMGXB3-205ENST00000514469 ZNF260Q3ZCT1 412 aa8.09□□□□□ -1.11
HMGXB3-205ENST00000514469 ACTBL2Q562R1 376 aa8.09□□□□□ -1.11
HMGXB3-205ENST00000514469 VAX1Q5SQQ9 334 aa8.09□□□□□ -1.11
HMGXB3-205ENST00000514469 ZNF773Q6PK81 442 aa8.09□□□□□ -1.11
HMGXB3-205ENST00000514469 UNQ5815/PRO19632Q6UWF5 114 aa8.09□□□□□ -1.11
HMGXB3-205ENST00000514469 TPRA1Q86W33 373 aa8.09□□□□□ -1.11
HMGXB3-205ENST00000514469 H1FOOQ8IZA3 346 aaPredicted RBP8.09□□□□□ -1.11
HMGXB3-205ENST00000514469 LFNGQ8NES3 379 aa8.09□□□□□ -1.11
HMGXB3-205ENST00000514469 PRR25Q96S07 402 aa8.09□□□□□ -1.11
HMGXB3-205ENST00000514469 GINS4Q9BRT9 223 aa8.09□□□□□ -1.11
HMGXB3-205ENST00000514469 CENPOQ9BU64 300 aa8.09□□□□□ -1.11
HMGXB3-205ENST00000514469 ATG5Q9H1Y0 275 aa8.09□□□□□ -1.11
HMGXB3-205ENST00000514469 ELF5Q9UKW6 265 aaPredicted RBP8.09□□□□□ -1.11
HMGXB3-205ENST00000514469 LSM4Q9Y4Z0 139 aaKnown RBP8.09□□□□□ -1.11
HMGXB3-205ENST00000514469 KMT2CQ8NEZ4 4911 aaKnown RBP8.08□□□□□ -1.12
HMGXB3-205ENST00000514469 IGHV4OR15-8A0A075B7B6 117 aa8.08□□□□□ -1.12
HMGXB3-205ENST00000514469 A0A087WW49 117 aa8.08□□□□□ -1.12
HMGXB3-205ENST00000514469 CRYGBP07316 175 aa8.08□□□□□ -1.12
HMGXB3-205ENST00000514469 TALDO1P37837 337 aa8.08□□□□□ -1.12
HMGXB3-205ENST00000514469 ECI1P42126 302 aa8.08□□□□□ -1.12
HMGXB3-205ENST00000514469 LGALS7P47929 136 aa8.08□□□□□ -1.12
HMGXB3-205ENST00000514469 TAGLNQ01995 201 aaKnown RBP8.08□□□□□ -1.12
HMGXB3-205ENST00000514469 FXYD3Q14802 87 aa8.08□□□□□ -1.12
HMGXB3-205ENST00000514469 TMEM177Q53S58 311 aa8.08□□□□□ -1.12
HMGXB3-205ENST00000514469 SFXN4Q6P4A7 337 aa8.08□□□□□ -1.12
HMGXB3-205ENST00000514469 GRPEL2Q8TAA5 225 aa8.08□□□□□ -1.12
HMGXB3-205ENST00000514469 DDB2Q92466 427 aa8.08□□□□□ -1.12
HMGXB3-205ENST00000514469 DCUN1D4Q92564 292 aa8.08□□□□□ -1.12
HMGXB3-205ENST00000514469 DLX4Q92988 240 aaPredicted RBP8.08□□□□□ -1.12
HMGXB3-205ENST00000514469 HARBI1Q96MB7 349 aa8.08□□□□□ -1.12
HMGXB3-205ENST00000514469 SLA2Q9H6Q3 261 aa8.08□□□□□ -1.12
HMGXB3-205ENST00000514469 ZNF256Q9Y2P7 627 aaPredicted RBP8.08□□□□□ -1.12
HMGXB3-205ENST00000514469 LINC00473A8K010 186 aa8.07□□□□□ -1.12
HMGXB3-205ENST00000514469 H3BUA1 57 aa8.07□□□□□ -1.12
HMGXB3-205ENST00000514469 OVOL1O14753 267 aa8.07□□□□□ -1.12
HMGXB3-205ENST00000514469 SCGNO76038 276 aa8.07□□□□□ -1.12
HMGXB3-205ENST00000514469 RRASP10301 218 aa8.07□□□□□ -1.12
HMGXB3-205ENST00000514469 DUTP33316 252 aaKnown RBP8.07□□□□□ -1.12
HMGXB3-205ENST00000514469 SLURP1P55000 103 aa8.07□□□□□ -1.12
HMGXB3-205ENST00000514469 TPPP2P59282 170 aa8.07□□□□□ -1.12
HMGXB3-205ENST00000514469 PJVKQ0ZLH3 352 aa8.07□□□□□ -1.12
HMGXB3-205ENST00000514469 CBX3Q13185 183 aa8.07□□□□□ -1.12
HMGXB3-205ENST00000514469 RTL8BQ17RB0 113 aa8.07□□□□□ -1.12
HMGXB3-205ENST00000514469 MRGPRG-AS1Q2M3A8 158 aa8.07□□□□□ -1.12
HMGXB3-205ENST00000514469 CDNFQ49AH0 187 aa8.07□□□□□ -1.12
HMGXB3-205ENST00000514469 HACD4Q5VWC8 232 aa8.07□□□□□ -1.12
HMGXB3-205ENST00000514469 ZNF429Q86V71 674 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms