RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 FAM90A9PA6NNJ1 464 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 RNF212BA8MTL3 300 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 TXNL1O43396 289 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 GSTZ1O43708 216 aaPredicted RBP7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 TPPPO94811 219 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 RAB3DO95716 219 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 AMY2AP04746 511 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 CNTFRP26992 372 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 TAS2R19P59542 299 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 TSPAN5P62079 268 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 RPL30P62888 115 aaKnown RBP7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 HABP2Q14520 560 aaPredicted RBP7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 AANATQ16613 207 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 VAX1Q5SQQ9 334 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 FAM71F2Q6NXP2 309 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 STEAP1BQ6NZ63 245 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 C16orf87Q6PH81 154 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 C16orf54Q6UWD8 224 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 Q6ZS46 218 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 Q8N402 240 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 ZNF645Q8N7E2 425 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 TMEM229BQ8NBD8 167 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 BVESQ8NE79 360 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 OR4C16Q8NGL9 310 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 FAM216AQ8WUB2 273 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 MOB3AQ96BX8 217 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 RITA1Q96K30 269 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 SDHCQ99643 169 aaPredicted RBP7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 MDFIQ99750 246 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 THAP7Q9BT49 309 aaPredicted RBP7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 WDR12Q9GZL7 423 aaKnown RBP7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 SLC5A7Q9GZV3 580 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 AKIP1Q9NQ31 210 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 TAS2R8Q9NYW2 309 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 C1RLQ9NZP8 487 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 SIGLEC9Q9Y336 463 aa7.83□□□□□ -1.16
TOPBP1-209ENST00000513818 LINC00854A0A1B0GVQ3 168 aa7.82□□□□□ -1.16
TOPBP1-209ENST00000513818 ANKRD20A5PA0PJZ0 165 aa7.82□□□□□ -1.16
TOPBP1-209ENST00000513818 LINC00473A8K010 186 aa7.82□□□□□ -1.16
TOPBP1-209ENST00000513818 H0YJW9 148 aa7.82□□□□□ -1.16
TOPBP1-209ENST00000513818 H7C2Y5 167 aa7.82□□□□□ -1.16
TOPBP1-209ENST00000513818 CD74P04233 296 aa7.82□□□□□ -1.16
TOPBP1-209ENST00000513818 CSF1P09603 554 aa7.82□□□□□ -1.16
TOPBP1-209ENST00000513818 ZNF735P0CB33 412 aa7.82□□□□□ -1.16
TOPBP1-209ENST00000513818 PI3P19957 117 aa7.82□□□□□ -1.16
TOPBP1-209ENST00000513818 MDKP21741 143 aaPredicted RBP7.82□□□□□ -1.16
TOPBP1-209ENST00000513818 ETV6P41212 452 aa7.82□□□□□ -1.16
TOPBP1-209ENST00000513818 BAK1Q16611 211 aa7.82□□□□□ -1.16
TOPBP1-209ENST00000513818 SCGB2B2Q4G0G5 96 aa7.82□□□□□ -1.16
TOPBP1-209ENST00000513818 PHLDA2Q53GA4 152 aa7.82□□□□□ -1.16
TOPBP1-209ENST00000513818 ACTBL2Q562R1 376 aa7.82□□□□□ -1.16
TOPBP1-209ENST00000513818 ZNF818PQ6ZRF7 136 aa7.82□□□□□ -1.16
TOPBP1-209ENST00000513818 Q6ZSV7 163 aa7.82□□□□□ -1.16
TOPBP1-209ENST00000513818 OR6F1Q8NGZ6 308 aa7.82□□□□□ -1.16
TOPBP1-209ENST00000513818 GIMAP1Q8WWP7 306 aa7.82□□□□□ -1.16
TOPBP1-209ENST00000513818 SLC35D1Q9NTN3 355 aa7.82□□□□□ -1.16
TOPBP1-209ENST00000513818 RABL2AQ9UBK7 228 aaPredicted RBP7.82□□□□□ -1.16
TOPBP1-209ENST00000513818 RABL2BQ9UNT1 228 aa7.82□□□□□ -1.16
TOPBP1-209ENST00000513818 OR2F2O95006 317 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 MOSP00540 346 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 IGKV1-16P04430 117 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 IFNA6P05013 189 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 CRYBA1P05813 215 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 FAM106CPP0CH98 169 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 AKAIN1P0CW23 69 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 CD1BP29016 333 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 DUTP33316 252 aaKnown RBP7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 THBS3P49746 956 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 F2RL1P55085 397 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 RAG2P55895 527 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 BLCAPP62952 87 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 KLF9Q13886 244 aaPredicted RBP7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 MMDQ15546 238 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 ABCA11PQ4W5N1 156 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 C9orf152Q5JTZ5 239 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 AADACL3Q5VUY0 350 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 TRIQKQ629K1 86 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 KCTD9Q7L273 389 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 Q8N6K4 173 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 CLRN3Q8NCR9 226 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 OR2T10Q8NGZ9 312 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 OR51H1Q8NH63 302 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 TCTEX1D2Q8WW35 142 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 MRGPRFQ96AM1 343 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 RBM14Q96PK6 669 aaKnown RBP7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 PITPNC1Q9UKF7 332 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 MOB4Q9Y3A3 225 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 WASHC3Q9Y3C0 194 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 ANK2Q01484 3957 aa7.81□□□□□ -1.16
TOPBP1-209ENST00000513818 NCBP2LA6PVI3 153 aaKnown RBP7.8□□□□□ -1.16
TOPBP1-209ENST00000513818 FCGR3BO75015 233 aa7.8□□□□□ -1.16
TOPBP1-209ENST00000513818 APOA2P02652 100 aa7.8□□□□□ -1.16
TOPBP1-209ENST00000513818 AMY1AP04745 511 aa7.8□□□□□ -1.16
TOPBP1-209ENST00000513818 RLN1P04808 185 aa7.8□□□□□ -1.16
TOPBP1-209ENST00000513818 HKR1P10072 659 aa7.8□□□□□ -1.16
TOPBP1-209ENST00000513818 PGAM2P15259 253 aa7.8□□□□□ -1.16
TOPBP1-209ENST00000513818 GNRHRP30968 328 aa7.8□□□□□ -1.16
TOPBP1-209ENST00000513818 SSBP1Q04837 148 aaKnown RBP7.8□□□□□ -1.16
TOPBP1-209ENST00000513818 EIF4EBP1Q13541 118 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms