RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 SPHK2Q9NRA0 654 aa4.93□□□□□ -1.62
TRAPPC11-209ENST00000512476 FAM49BQ9NUQ9 324 aa4.93□□□□□ -1.62
TRAPPC11-209ENST00000512476 SMIM26A0A096LP01 95 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 TRAV8-2A0A0B4J237 113 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 A0A0J9YY10 115 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 A0A1B0GX78 115 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 LEUTXA8MZ59 168 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 C12orf77C9JDV5 145 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 AGTR1P30556 359 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 POLR2HP52434 150 aaKnown RBP4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 IFITM3Q01628 133 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 PSG7Q13046 419 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 MLF2Q15773 248 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 KLF17Q5JT82 389 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 CLLU1OSQ5K130 101 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 LINC00242Q5T6M2 205 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 PRNTQ86SH4 94 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 MMGT1Q8N4V1 131 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 WBP1Q96G27 269 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 HSD17B10Q99714 261 aaKnown RBP4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 KCTD14Q9BQ13 255 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 C1QTNF4Q9BXJ3 329 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 GTSF1LQ9H1H1 148 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 SPANXA1Q9NS26 97 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 TANC1Q9C0D5 1861 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 ZNF503-AS2A6NEH8 195 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 SIGLEC16A6NMB1 481 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 H0Y9J4 135 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 SRSF10O75494 262 aaKnown RBP4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 OR2A4O95047 310 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 CXorf1O96002 111 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 LGALS1P09382 135 aaKnown RBP4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 HTR4Q13639 388 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 ZNF181Q2M3W8 571 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 SCGB2B2Q4G0G5 96 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 AWAT2Q6E213 333 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 FBXW12Q6X9E4 464 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 SGPP2Q8IWX5 399 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 LINC00337Q8N6G1 96 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 SAMD12Q8N8I0 201 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 LY6G5BQ8NDX9 201 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 RXFP4Q8TDU9 374 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 AURKBQ96GD4 344 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 MCEEQ96PE7 176 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 OR2M2Q96R28 347 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 OR2A7Q96R45 310 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 SRMSQ9H3Y6 488 aa4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 KLF13Q9Y2Y9 288 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC11-209ENST00000512476 A0A1B0GX51 115 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 M0R2Z0 102 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 LMX1BO60663 402 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 ZNF354AO60765 605 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 ZFAND5O76080 213 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 INAFM2P0DMQ5 153 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 RPS23P62266 143 aaKnown RBP4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 TNFAIP6P98066 277 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 PMVKQ15126 192 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 FAM222AQ5U5X8 452 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 UNQ9165/PRO28630Q6UXU0 137 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 OOSP2Q86WS3 158 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 PDZD9Q8IXQ8 264 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 NABP1Q96AH0 204 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 LRRC61Q9BV99 259 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 OR2H1Q9GZK4 316 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 HES4Q9HCC6 221 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 SCN3BQ9NY72 215 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 RSL24D1Q9UHA3 163 aaKnown RBP4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 TSC2P49815 1807 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 IGHV3-20A0A0C4DH32 117 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 TEX48A0A1B0GUV7 120 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 A6NDN8 102 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 I3L4J1 428 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 K7ENP7 123 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 NDUFS5O43920 106 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 IFNA17P01571 189 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 HSPA9P38646 679 aaKnown RBP4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 CCL23P55773 120 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 RPS25P62851 125 aaKnown RBP4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 TMEM267Q0VDI3 215 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 FZD2Q14332 565 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 LCN12Q6JVE5 192 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 CLEC20AQ6ZU45 233 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 OR4E2Q8NGC2 313 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 OR10G6Q8NH81 332 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 ADAT1Q9BUB4 502 aaKnown RBP4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 C20orf85Q9H1P6 137 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 MRPL16Q9NX20 251 aaKnown RBP4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 TBX21Q9UL17 535 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 CENPFP49454 3210 aa4.91□□□□□ -1.62
TRAPPC11-209ENST00000512476 TMED7-TICAM2A0A0A6YYA0 188 aa4.9□□□□□ -1.62
TRAPPC11-209ENST00000512476 MRASO14807 208 aa4.9□□□□□ -1.62
TRAPPC11-209ENST00000512476 LAMP1P11279 417 aa4.9□□□□□ -1.62
TRAPPC11-209ENST00000512476 HIST1H1BP16401 226 aaKnown RBP4.9□□□□□ -1.62
TRAPPC11-209ENST00000512476 RPS28P62857 69 aaKnown RBP4.9□□□□□ -1.62
TRAPPC11-209ENST00000512476 HLA-DRB3P79483 266 aa4.9□□□□□ -1.62
TRAPPC11-209ENST00000512476 IL15RAQ13261 267 aa4.9□□□□□ -1.62
TRAPPC11-209ENST00000512476 KIAA0040Q15053 153 aa4.9□□□□□ -1.62
TRAPPC11-209ENST00000512476 IAH1Q2TAA2 248 aaPredicted RBP4.9□□□□□ -1.62
TRAPPC11-209ENST00000512476 SP6Q3SY56 376 aa4.9□□□□□ -1.62
TRAPPC11-209ENST00000512476 ZFP69Q49AA0 526 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms