RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ZNF562Q6V9R5 426 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 ZNF497Q6ZNH5 498 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 LINC00596Q86U02 117 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 CLVS1Q8IUQ0 354 aaPredicted RBP8.73□□□□□ -1.01
RNF4-216ENST00000511859 OR10V1Q8NGI7 309 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 OR10K1Q8NGX5 313 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 TNFAIP8L1Q8WVP5 186 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 FBXL15Q9H469 300 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 PEMTQ9UBM1 199 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 ING4Q9UNL4 249 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 FCN1O00602 326 aa8.72□□□□□ -1.01
RNF4-216ENST00000511859 OR2A4O95047 310 aa8.72□□□□□ -1.01
RNF4-216ENST00000511859 HTR3BO95264 441 aa8.72□□□□□ -1.01
RNF4-216ENST00000511859 FGF9P31371 208 aaPredicted RBP8.72□□□□□ -1.01
RNF4-216ENST00000511859 VBP1P61758 197 aa8.72□□□□□ -1.01
RNF4-216ENST00000511859 ASCL4Q6XD76 172 aa8.72□□□□□ -1.01
RNF4-216ENST00000511859 WFDC3Q8IUB2 231 aa8.72□□□□□ -1.01
RNF4-216ENST00000511859 PHYHIPQ92561 330 aa8.72□□□□□ -1.01
RNF4-216ENST00000511859 MRPL20Q9BYC9 149 aaKnown RBP8.72□□□□□ -1.01
RNF4-216ENST00000511859 KCNK15Q9H427 330 aa8.72□□□□□ -1.01
RNF4-216ENST00000511859 OR2S2Q9NQN1 319 aa8.72□□□□□ -1.01
RNF4-216ENST00000511859 ZNF355PQ9NSJ1 428 aa8.72□□□□□ -1.01
RNF4-216ENST00000511859 PLA2G2EQ9NZK7 142 aa8.72□□□□□ -1.01
RNF4-216ENST00000511859 PEF1Q9UBV8 284 aaKnown RBP8.72□□□□□ -1.01
RNF4-216ENST00000511859 TRAPPC2LQ9UL33 140 aa8.72□□□□□ -1.01
RNF4-216ENST00000511859 FAT2Q9NYQ8 4349 aa8.71□□□□□ -1.02
RNF4-216ENST00000511859 ABCA13Q86UQ4 5058 aa8.71□□□□□ -1.02
RNF4-216ENST00000511859 A0A0J9YWU9 116 aa8.71□□□□□ -1.02
RNF4-216ENST00000511859 HBZP02008 142 aa8.71□□□□□ -1.02
RNF4-216ENST00000511859 RAB3BP20337 219 aa8.71□□□□□ -1.02
RNF4-216ENST00000511859 GALP22466 123 aa8.71□□□□□ -1.02
RNF4-216ENST00000511859 AADACP22760 399 aa8.71□□□□□ -1.02
RNF4-216ENST00000511859 SDC2P34741 201 aa8.71□□□□□ -1.02
RNF4-216ENST00000511859 CLDN12P56749 244 aa8.71□□□□□ -1.02
RNF4-216ENST00000511859 NCS1P62166 190 aa8.71□□□□□ -1.02
RNF4-216ENST00000511859 P2RY14Q15391 338 aa8.71□□□□□ -1.02
RNF4-216ENST00000511859 TIMM50Q3ZCQ8 353 aa8.71□□□□□ -1.02
RNF4-216ENST00000511859 CD300EQ496F6 205 aaPredicted RBP8.71□□□□□ -1.02
RNF4-216ENST00000511859 ATAD3CQ5T2N8 411 aa8.71□□□□□ -1.02
RNF4-216ENST00000511859 C6orf183Q5T699 404 aa8.71□□□□□ -1.02
RNF4-216ENST00000511859 HES5Q5TA89 166 aa8.71□□□□□ -1.02
RNF4-216ENST00000511859 GLT8D1Q68CQ7 371 aa8.71□□□□□ -1.02
RNF4-216ENST00000511859 TRAT1Q6PIZ9 186 aa8.71□□□□□ -1.02
RNF4-216ENST00000511859 NR2C2APQ86WQ0 139 aa8.71□□□□□ -1.02
RNF4-216ENST00000511859 ODF3L1Q8IXM7 274 aa8.71□□□□□ -1.02
RNF4-216ENST00000511859 NEK7Q8TDX7 302 aa8.71□□□□□ -1.02
RNF4-216ENST00000511859 FAM103A1Q9BTL3 118 aaKnown RBP8.71□□□□□ -1.02
RNF4-216ENST00000511859 ABHD14AQ9BUJ0 271 aa8.71□□□□□ -1.02
RNF4-216ENST00000511859 PLGRKTQ9HBL7 147 aa8.71□□□□□ -1.02
RNF4-216ENST00000511859 ZNF581Q9P0T4 197 aa8.71□□□□□ -1.02
RNF4-216ENST00000511859 TRAV1-2A0A0B4J238 106 aa8.7□□□□□ -1.02
RNF4-216ENST00000511859 CCDC160A6NGH7 325 aa8.7□□□□□ -1.02
RNF4-216ENST00000511859 GEMIN2O14893 280 aaKnown RBP8.7□□□□□ -1.02
RNF4-216ENST00000511859 SERPINA2P20848 420 aa8.7□□□□□ -1.02
RNF4-216ENST00000511859 RBM11P57052 281 aaKnown RBP8.7□□□□□ -1.02
RNF4-216ENST00000511859 RPEL1Q2QD12 228 aa8.7□□□□□ -1.02
RNF4-216ENST00000511859 MPV17LQ2QL34 196 aa8.7□□□□□ -1.02
RNF4-216ENST00000511859 AWAT2Q6E213 333 aa8.7□□□□□ -1.02
RNF4-216ENST00000511859 ZNF343Q6P1L6 599 aa8.7□□□□□ -1.02
RNF4-216ENST00000511859 GLIPR1L1Q6UWM5 242 aa8.7□□□□□ -1.02
RNF4-216ENST00000511859 ZNF833PQ6ZTB9 187 aa8.7□□□□□ -1.02
RNF4-216ENST00000511859 PRR18Q8N4B5 295 aa8.7□□□□□ -1.02
RNF4-216ENST00000511859 NKAIN3Q8N8D7 197 aa8.7□□□□□ -1.02
RNF4-216ENST00000511859 POC5Q8NA72 575 aa8.7□□□□□ -1.02
RNF4-216ENST00000511859 MRPS24Q96EL2 167 aaKnown RBP8.7□□□□□ -1.02
RNF4-216ENST00000511859 S100A13Q99584 98 aa8.7□□□□□ -1.02
RNF4-216ENST00000511859 RNF5Q99942 180 aa8.7□□□□□ -1.02
RNF4-216ENST00000511859 METTL9Q9H1A3 318 aa8.7□□□□□ -1.02
RNF4-216ENST00000511859 IL36GQ9NZH8 169 aa8.7□□□□□ -1.02
RNF4-216ENST00000511859 RCC2Q9P258 522 aaKnown RBP8.7□□□□□ -1.02
RNF4-216ENST00000511859 V9GY05 133 aa8.7□□□□□ -1.02
RNF4-216ENST00000511859 DNAH2Q9P225 4427 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 A0A0B4J203 849 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 A0A1W2PP11 408 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 PDCD5O14737 125 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 RBBP9O75884 186 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 GSTP1P09211 210 aaKnown RBP8.69□□□□□ -1.02
RNF4-216ENST00000511859 MC5RP33032 325 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 BMI1P35226 326 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 SERPINB10P48595 397 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 EWSR1Q01844 656 aaKnown RBP eCLIP8.69□□□□□ -1.026e-6■□□□□ 9.2
RNF4-216ENST00000511859 CTF1Q16619 201 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 SLC22A6Q4U2R8 563 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 LY6G6FQ5SQ64 297 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 OR10K2Q6IF99 312 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 LINC00336Q6ZUF6 198 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 LYG2Q86SG7 212 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 OR1L1Q8NH94 360 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 SNAPC3Q92966 411 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 FAM46BQ96A09 425 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 USMG5Q96IX5 58 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 TMEM68Q96MH6 324 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 GGTLC1Q9BX51 225 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 WFDC10AQ9H1F0 79 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 BANF2Q9H503 90 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 SPACA1Q9HBV2 294 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 GAB2Q9UQC2 676 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 TP53TG1Q9Y2A0 90 aa8.69□□□□□ -1.02
RNF4-216ENST00000511859 LOC102724200A0A096LPH7 203 aaPredicted RBP8.68□□□□□ -1.02
RNF4-216ENST00000511859 OR5H14A6NHG9 310 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms