RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 FCGR3AP08637 254 aa5□□□□□ -1.61
USP38-203ENST00000511739 ASAH2BP0C7U1 165 aa5□□□□□ -1.61
USP38-203ENST00000511739 SURF2Q15527 256 aaPredicted RBP5□□□□□ -1.61
USP38-203ENST00000511739 CSRP2Q16527 193 aa5□□□□□ -1.61
USP38-203ENST00000511739 UQCC3Q6UW78 93 aa5□□□□□ -1.61
USP38-203ENST00000511739 STHQ8IWL8 128 aa5□□□□□ -1.61
USP38-203ENST00000511739 NEU4Q8WWR8 484 aaPredicted RBP5□□□□□ -1.61
USP38-203ENST00000511739 ANGPTL4Q9BY76 406 aa5□□□□□ -1.61
USP38-203ENST00000511739 KLK15Q9H2R5 256 aa5□□□□□ -1.61
USP38-203ENST00000511739 MAP1LC3AQ9H492 121 aa5□□□□□ -1.61
USP38-203ENST00000511739 TCRBV16S1A1N1A0A5B0 115 aa5□□□□□ -1.61
USP38-203ENST00000511739 FBLL1A6NHQ2 334 aaKnown RBP5□□□□□ -1.61
USP38-203ENST00000511739 PLPP2O43688 288 aa5□□□□□ -1.61
USP38-203ENST00000511739 MPC2O95563 127 aa5□□□□□ -1.61
USP38-203ENST00000511739 CD1AP06126 327 aa5□□□□□ -1.61
USP38-203ENST00000511739 RND2P52198 227 aa5□□□□□ -1.61
USP38-203ENST00000511739 C10orf128Q5T292 105 aa5□□□□□ -1.61
USP38-203ENST00000511739 DTX2Q86UW9 622 aa5□□□□□ -1.61
USP38-203ENST00000511739 RGP1Q92546 391 aaPredicted RBP5□□□□□ -1.61
USP38-203ENST00000511739 ZNF385AQ96PM9 386 aaKnown RBP5□□□□□ -1.61
USP38-203ENST00000511739 PCM1Q15154 2024 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 GHRHP01286 108 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 HOXB1P14653 301 aaPredicted RBP4.99□□□□□ -1.61
USP38-203ENST00000511739 VDAC2P45880 294 aaPredicted RBP4.99□□□□□ -1.61
USP38-203ENST00000511739 MFAP2P55001 183 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 OR5AU1Q8NGC0 362 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 FAM131CQ96AQ9 280 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 ADAT3Q96EY9 351 aaPredicted RBP4.99□□□□□ -1.61
USP38-203ENST00000511739 TRPM6Q9BX84 2022 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 A0A0J9YW62 118 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 SLC25A20O43772 301 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 PTP4A3O75365 173 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 MOSPD3O75425 235 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 UPK3AO75631 287 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 RECKO95980 971 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 CA2P00918 260 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 FAM24BQ8N5W8 94 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 RAB24Q969Q5 203 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 COL25A1Q9BXS0 654 aaPredicted RBP4.99□□□□□ -1.61
USP38-203ENST00000511739 RBM38Q9H0Z9 239 aaKnown RBP4.99□□□□□ -1.61
USP38-203ENST00000511739 CALYQ9NYX4 217 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 DOPEY2Q9Y3R5 2298 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 CEACAM1P13688 526 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 CD69Q07108 199 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 C12orf73Q69YU5 71 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 ATG4DQ86TL0 474 aaPredicted RBP4.99□□□□□ -1.61
USP38-203ENST00000511739 C2orf88Q9BSF0 95 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 ZNF430Q9H8G1 570 aaPredicted RBP4.99□□□□□ -1.61
USP38-203ENST00000511739 SVILO95425 2214 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 NUP214P35658 2090 aaPredicted RBP4.99□□□□□ -1.61
USP38-203ENST00000511739 IGHV3OR16-13A0A075B7E8 117 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 IGHV1-45A0A0A0MS14 117 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 IGHV3-74A0A0B4J1X5 117 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 TCRBV4S1A1TA0A5B7 111 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 GALP22466 123 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 C3orf56Q8N813 242 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 OR13A1Q8NGR1 328 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 MARVELD3Q96A59 401 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 SFRP2Q96HF1 295 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 SSBP3Q9BWW4 388 aaPredicted RBP4.99□□□□□ -1.61
USP38-203ENST00000511739 SLC6A13Q9NSD5 602 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 RCC2Q9P258 522 aaKnown RBP4.99□□□□□ -1.61
USP38-203ENST00000511739 TRAV8-7A0A075B6U6 113 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 CTXND1A0A1B0GTU2 59 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 ZNF688P0C7X2 276 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 ZIC1Q15915 447 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 MESTQ5EB52 335 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 ZNF880Q6PDB4 577 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 ZNF826PQ6ZT77 177 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 ERASQ7Z444 233 aa4.99□□□□□ -1.61
USP38-203ENST00000511739 SPAG17Q6Q759 2223 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 IGHV4-34P06331 123 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 FGF5P12034 268 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 EGR1P18146 543 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 LTBRP36941 435 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 FAM74A3Q4VXF1 159 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 COL5A1-AS1Q5SY13 56 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 ATP1A1-AS1Q5TC04 95 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 DPPA3Q6W0C5 159 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 ZNF680Q8NEM1 530 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 MS4A3Q96HJ5 214 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 RHOVQ96L33 236 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 HIST1H4GQ99525 98 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 PRSS22Q9GZN4 317 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 AKIRIN1Q9H9L7 192 aaPredicted RBP4.98□□□□□ -1.61
USP38-203ENST00000511739 EXOGQ9Y2C4 368 aaKnown RBP4.98□□□□□ -1.61
USP38-203ENST00000511739 PXMP4Q9Y6I8 212 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 CEACAM21Q3KPI0 293 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 KIR3DL3Q8N743 410 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 DNASE2BQ8WZ79 361 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 TMEM204Q9BSN7 226 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 TMEM70Q9BUB7 260 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 CHST5Q9GZS9 411 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 BEX4Q9NWD9 120 aaPredicted RBP4.98□□□□□ -1.61
USP38-203ENST00000511739 NKX2-6A6NCS4 301 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 PROB1E7EW31 1015 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 MGAT2Q10469 447 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 TMEM186Q96B77 213 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 MRM2Q9UI43 246 aaKnown RBP4.98□□□□□ -1.61
USP38-203ENST00000511739 PRR32B1ATL7 298 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms