RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 PRRX1P54821 245 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 ID3Q02535 119 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 OPCMLQ14982 345 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 NCR3LG1Q68D85 454 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 BTNL3Q6UXE8 466 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 ZNF767PQ75MW2 155 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 OR10X1Q8NGY0 326 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 MARVELD3Q96A59 401 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 PIMREGQ9BSJ6 248 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 PCGF1Q9BSM1 259 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 ARL6Q9H0F7 186 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 UNKLQ9H9P5 680 aaKnown RBP12.45□□□□□ -0.42
SCLT1-209ENST00000511426 BOLA1Q9Y3E2 137 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 AMMECR1Q9Y4X0 333 aaPredicted RBP12.45□□□□□ -0.42
SCLT1-209ENST00000511426 RNF222A6NCQ9 220 aa12.44□□□□□ -0.42
SCLT1-209ENST00000511426 TOR1AO14656 332 aa12.44□□□□□ -0.42
SCLT1-209ENST00000511426 TXNL1O43396 289 aa12.44□□□□□ -0.42
SCLT1-209ENST00000511426 LY86O95711 162 aa12.44□□□□□ -0.42
SCLT1-209ENST00000511426 IGKV1-5P01602 117 aa12.44□□□□□ -0.42
SCLT1-209ENST00000511426 P0C879 139 aa12.44□□□□□ -0.42
SCLT1-209ENST00000511426 P2RY1P47900 373 aa12.44□□□□□ -0.42
SCLT1-209ENST00000511426 RTL8BQ17RB0 113 aa12.44□□□□□ -0.42
SCLT1-209ENST00000511426 RPL39P5Q59GN2 51 aa12.44□□□□□ -0.42
SCLT1-209ENST00000511426 GPR157Q5UAW9 335 aa12.44□□□□□ -0.42
SCLT1-209ENST00000511426 TMUB2Q71RG4 321 aa12.44□□□□□ -0.42
SCLT1-209ENST00000511426 ABHD12Q8N2K0 398 aa12.44□□□□□ -0.42
SCLT1-209ENST00000511426 ZNF525Q8N782 197 aa12.44□□□□□ -0.42
SCLT1-209ENST00000511426 OR1S1Q8NH92 325 aa12.44□□□□□ -0.42
SCLT1-209ENST00000511426 LEAP2Q969E1 77 aa12.44□□□□□ -0.42
SCLT1-209ENST00000511426 GPR146Q96CH1 333 aa12.44□□□□□ -0.42
SCLT1-209ENST00000511426 GSX2Q9BZM3 304 aa12.44□□□□□ -0.42
SCLT1-209ENST00000511426 PAIP2BQ9ULR5 123 aaKnown RBP12.44□□□□□ -0.42
SCLT1-209ENST00000511426 ZNF462Q96JM2 2506 aa12.43□□□□□ -0.42
SCLT1-209ENST00000511426 KANTRA0A1W2PQU2 76 aa12.43□□□□□ -0.42
SCLT1-209ENST00000511426 C22orf46C9J442 243 aa12.43□□□□□ -0.42
SCLT1-209ENST00000511426 RAMP3O60896 148 aa12.43□□□□□ -0.42
SCLT1-209ENST00000511426 S1PR2O95136 353 aa12.43□□□□□ -0.42
SCLT1-209ENST00000511426 NQO2P16083 231 aa12.43□□□□□ -0.42
SCLT1-209ENST00000511426 SSTR2P30874 369 aa12.43□□□□□ -0.42
SCLT1-209ENST00000511426 BRWD1-AS2P59051 145 aa12.43□□□□□ -0.42
SCLT1-209ENST00000511426 ERVK-16P61578 105 aa12.43□□□□□ -0.42
SCLT1-209ENST00000511426 IFITM2Q01629 132 aa12.43□□□□□ -0.42
SCLT1-209ENST00000511426 POU2AF1Q16633 256 aa12.43□□□□□ -0.42
SCLT1-209ENST00000511426 CLEC2AQ6UVW9 174 aa12.43□□□□□ -0.42
SCLT1-209ENST00000511426 SLC51BQ86UW2 128 aa12.43□□□□□ -0.42
SCLT1-209ENST00000511426 OR13D1Q8NGV5 346 aa12.43□□□□□ -0.42
SCLT1-209ENST00000511426 FAM168AQ92567 244 aa12.43□□□□□ -0.42
SCLT1-209ENST00000511426 CLEC7AQ9BXN2 247 aa12.43□□□□□ -0.42
SCLT1-209ENST00000511426 BPESC1Q9GZL8 116 aa12.43□□□□□ -0.42
SCLT1-209ENST00000511426 POLR3KQ9Y2Y1 108 aaPredicted RBP12.43□□□□□ -0.42
SCLT1-209ENST00000511426 KPTNQ9Y664 436 aa12.43□□□□□ -0.42
SCLT1-209ENST00000511426 IGHV2-26A0A0B4J1V2 119 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 MARCH11A6NNE9 402 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 TAAR5O14804 337 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 FCGR3BO75015 233 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 FOXH1O75593 365 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 SCGB1D2O95969 90 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 IGLV1-47P01700 117 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 APOA2P02652 100 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 ZNF816Q0VGE8 651 aaPredicted RBP12.42□□□□□ -0.42
SCLT1-209ENST00000511426 H2BFWTQ7Z2G1 175 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 ST6GALNAC6Q969X2 333 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 RAB40CQ96S21 281 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 OR5AC2Q9NZP5 309 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 CACNG5Q9UF02 275 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 LSM5Q9Y4Y9 91 aaKnown RBP12.42□□□□□ -0.42
SCLT1-209ENST00000511426 WRBO00258 174 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 BCL2L11O43521 198 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 MED6O75586 246 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 HRASP01112 189 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 IGHV3-7P01780 117 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 PRTN3P24158 256 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 RAB13P51153 203 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 ATP5J2P56134 94 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 HLA-DRB5Q30154 266 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 AARDQ4LEZ3 155 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 ZNF295-AS1Q8N0V1 137 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 C10orf105Q8TEF2 133 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 R3HDM4Q96D70 268 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 HEXA-AS1Q9H8Q6 139 aa12.42□□□□□ -0.42
SCLT1-209ENST00000511426 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.42□□□□□ -0.42
SCLT1-209ENST00000511426 A0A0G2JRQ6 117 aa12.41□□□□□ -0.42
SCLT1-209ENST00000511426 A0A1W2PPE3 182 aa12.41□□□□□ -0.42
SCLT1-209ENST00000511426 KIAA1324LA8MWY0 1029 aaPredicted RBP12.41□□□□□ -0.42
SCLT1-209ENST00000511426 GPR137BO60478 399 aa12.41□□□□□ -0.42
SCLT1-209ENST00000511426 KRASP01116 189 aa12.41□□□□□ -0.42
SCLT1-209ENST00000511426 IFNA7P01567 189 aa12.41□□□□□ -0.42
SCLT1-209ENST00000511426 MC5RP33032 325 aa12.41□□□□□ -0.42
SCLT1-209ENST00000511426 TAS2R30P59541 319 aa12.41□□□□□ -0.42
SCLT1-209ENST00000511426 TEX261Q6UWH6 196 aa12.41□□□□□ -0.42
SCLT1-209ENST00000511426 PDPNQ86YL7 162 aa12.41□□□□□ -0.42
SCLT1-209ENST00000511426 OR11H6Q8NGC7 330 aa12.41□□□□□ -0.42
SCLT1-209ENST00000511426 OR5AN1Q8NGI8 311 aa12.41□□□□□ -0.42
SCLT1-209ENST00000511426 CLDND2Q8NHS1 167 aa12.41□□□□□ -0.42
SCLT1-209ENST00000511426 ARPC5LQ9BPX5 153 aa12.41□□□□□ -0.42
SCLT1-209ENST00000511426 RCL1Q9Y2P8 373 aaKnown RBP12.41□□□□□ -0.42
SCLT1-209ENST00000511426 U3KQ87 197 aa12.41□□□□□ -0.42
SCLT1-209ENST00000511426 UBR5O95071 2799 aaPredicted RBP12.4□□□□□ -0.42
SCLT1-209ENST00000511426 A1L4Q6 167 aa12.4□□□□□ -0.42
SCLT1-209ENST00000511426 VWC2LB2RUY7 222 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms