RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 CXCL10P02778 98 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 FAM157BP0CG42 384 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.28□□□□□ -1.24
HTT-208ENST00000510626 CXCL16Q9H2A7 254 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 SPNS3Q6ZMD2 512 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 SSMEM1Q8WWF3 244 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 AGMATQ9BSE5 352 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 PLSCR2Q9NRY7 297 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 SIT1Q9Y3P8 196 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 NDUFB4O95168 129 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 LRTM2Q8N967 370 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 LGALS3P17931 250 aaKnown RBP7.28□□□□□ -1.24
HTT-208ENST00000510626 CACNG8Q8WXS5 425 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 TMEM140Q9NV12 185 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 ATP23Q9Y6H3 246 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 A0A1B0GTH9 108 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 ASAH2BP0C7U1 165 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 PRRT4C9JH25 899 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 SIGLEC14Q08ET2 396 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 HES3Q5TGS1 186 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 ZFAND6Q6FIF0 208 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 TMEM108Q6UXF1 575 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 CTAG1AP78358 180 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 GPBAR1Q8TDU6 330 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 CBLN4Q9NTU7 201 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 DNASE2O00115 360 aaPredicted RBP7.28□□□□□ -1.24
HTT-208ENST00000510626 HINT1P49773 126 aaPredicted RBP7.28□□□□□ -1.24
HTT-208ENST00000510626 MRPS18BQ9Y676 258 aaKnown RBP7.28□□□□□ -1.24
HTT-208ENST00000510626 LY96Q9Y6Y9 160 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 MPZL1O95297 269 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 MC5RP33032 325 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 NCKAP5O14513 1909 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 COX5BP10606 129 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 OR8I2Q8N0Y5 310 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 ZNF831Q5JPB2 1677 aa7.27□□□□□ -1.24
HTT-208ENST00000510626 SLC23A3Q6PIS1 610 aa7.27□□□□□ -1.24
HTT-208ENST00000510626 RTN4RL1Q86UN2 441 aaPredicted RBP7.27□□□□□ -1.24
HTT-208ENST00000510626 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.27□□□□□ -1.24
HTT-208ENST00000510626 PCOLCE2Q9UKZ9 415 aa7.27□□□□□ -1.24
HTT-208ENST00000510626 DNAL4O96015 105 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 GAB4Q2WGN9 574 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 RNFT1Q5M7Z0 435 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 INO80CQ6PI98 192 aaPredicted RBP7.27□□□□□ -1.25
HTT-208ENST00000510626 DXOO77932 396 aaKnown RBP7.27□□□□□ -1.25
HTT-208ENST00000510626 SONP18583 2426 aaKnown RBP7.27□□□□□ -1.25
HTT-208ENST00000510626 P2RY4P51582 365 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 TIMM23BQ5SRD1 257 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 DNAJC4Q9NNZ3 241 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 NMUP48645 174 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 MMD2Q8IY49 270 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 LOC107984156A0A0G2JMH3 177 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 CXCL13O43927 109 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 TRGC1P0CF51 173 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 PPP1CCP36873 323 aaKnown RBP7.27□□□□□ -1.25
HTT-208ENST00000510626 ARL17AQ8IVW1 177 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 CSN3P07498 182 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 FTH1P19P0C7X4 201 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 KIR2DL4Q99706 377 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 CFPP27918 469 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 ZXDAP98168 799 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 HIST1H1AQ02539 215 aaPredicted RBP7.27□□□□□ -1.25
HTT-208ENST00000510626 OR10D3Q8NH80 312 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 PXMP4Q9Y6I8 212 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 F8VVB4 439 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 F8VWA3 439 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 SOCS1O15524 211 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 TMEM249Q2WGJ8 235 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 TPSD1Q9BZJ3 242 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 UBALD2Q8IYN6 164 aa7.27□□□□□ -1.25
HTT-208ENST00000510626 SPINK4O60575 86 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 TMEM106BQ9NUM4 274 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 GNG7O60262 68 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 CA6P23280 308 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 CYSLTR1Q9Y271 337 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 ZNF788Q6ZQV5 615 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 FADS6Q8N9I5 356 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 CEACAM18A8MTB9 384 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 UQCRFS1P47985 274 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 C2orf68Q2NKX9 166 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 PARLQ9H300 379 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 J3QR06 171 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 SS18L1O75177 396 aaPredicted RBP7.26□□□□□ -1.25
HTT-208ENST00000510626 FGF5P12034 268 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 TSPO2Q5TGU0 170 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 SPANXN1Q5VSR9 72 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 RGP1Q92546 391 aaPredicted RBP7.26□□□□□ -1.25
HTT-208ENST00000510626 PTPRDP23468 1912 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 MGAT2Q10469 447 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 FAM131CQ96AQ9 280 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 FBLN5Q9UBX5 448 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 TRBV23-1A0A0A0MS06 115 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 GNG10P50151 68 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 TMEM170AQ8WVE7 144 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 FMC1Q96HJ9 113 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 ABHD14AQ9BUJ0 271 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 TRAV9-2A0A087WT02 112 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 TSPOP30536 169 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 MUC15Q8N387 334 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 LRRC75AQ8NAA5 344 aa7.26□□□□□ -1.25
HTT-208ENST00000510626 HARBI1Q96MB7 349 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms