RNA–Protein interactions for RNA: ENST00000510545.5

CLDND1-222, Transcript of claudin domain containing 1, human

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-222	ENST00000510545	LYNX1	P0DP58	116 aa		13.31	□□□□□ -0.28
CLDND1-222	ENST00000510545	CLINT1	Q14677	625 aa		13.31	□□□□□ -0.28
CLDND1-222	ENST00000510545	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.31	□□□□□ -0.28
CLDND1-222	ENST00000510545	ZNF439	Q8NDP4	499 aa		13.31	□□□□□ -0.28
CLDND1-222	ENST00000510545	IDI2-AS1	Q9NZ38	188 aa		13.31	□□□□□ -0.28
CLDND1-222	ENST00000510545	ACACB	O00763	2458 aa		13.31	□□□□□ -0.28
CLDND1-222	ENST00000510545	IAPP	P10997	89 aa		13.31	□□□□□ -0.28
CLDND1-222	ENST00000510545	TUSC1	Q2TAM9	212 aa		13.31	□□□□□ -0.28
CLDND1-222	ENST00000510545	MIDN	Q504T8	468 aa		13.31	□□□□□ -0.28
CLDND1-222	ENST00000510545	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.31	□□□□□ -0.28
CLDND1-222	ENST00000510545	hADV38S2	A0JD32	116 aa		13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	KRBOX1	C9JBD0	128 aa		13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	ITGB1BP1	O14713	200 aa		13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	SYNGR2	O43760	224 aa		13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	RPL31	P62899	125 aa	Known RBP	13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	TMEM217	Q8N7C4	229 aa		13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	TCTEX1D1	Q8N7M0	179 aa		13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	GINS3	Q9BRX5	216 aa		13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	SLC25A31	Q9H0C2	315 aa		13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	COA4	Q9NYJ1	87 aa		13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	ZNRD1	Q9P1U0	126 aa		13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	LPAR3	Q9UBY5	353 aa		13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	LINC00312	Q9Y6C7	94 aa		13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	CCL3L1	P16619	93 aa		13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	COL8A2	P25067	703 aa		13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	DYNLT3	P51808	116 aa		13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	EIF4E3	Q8N5X7	224 aa	Known RBP	13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	OR5C1	Q8NGR4	320 aa		13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	FAM216A	Q8WUB2	273 aa		13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	RBMXL1	Q96E39	390 aa	Known RBP	13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	RAB40C	Q96S21	281 aa		13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	ZNF251	Q9BRH9	671 aa		13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	SH3BGRL3	Q9H299	93 aa		13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	RAB9B	Q9NP90	201 aa		13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	RFNG	Q9Y644	331 aa		13.3	□□□□□ -0.28
CLDND1-222	ENST00000510545	SAA2-SAA4	A0A096LPE2	208 aa		13.29	□□□□□ -0.28
CLDND1-222	ENST00000510545	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.29	□□□□□ -0.28
CLDND1-222	ENST00000510545	TOR1A	O14656	332 aa		13.29	□□□□□ -0.28
CLDND1-222	ENST00000510545	TXNL1	O43396	289 aa		13.29	□□□□□ -0.28
CLDND1-222	ENST00000510545	FCGR3B	O75015	233 aa		13.29	□□□□□ -0.28
CLDND1-222	ENST00000510545	SAA2	P0DJI9	122 aa	Predicted RBP	13.29	□□□□□ -0.28
CLDND1-222	ENST00000510545	GNG10	P50151	68 aa		13.29	□□□□□ -0.28
CLDND1-222	ENST00000510545	SULT1A2	P50226	295 aa		13.29	□□□□□ -0.28
CLDND1-222	ENST00000510545	PXDC1	Q5TGL8	231 aa		13.29	□□□□□ -0.28
CLDND1-222	ENST00000510545	TMEM200B	Q69YZ2	307 aa		13.29	□□□□□ -0.28
CLDND1-222	ENST00000510545	EIF5AL1	Q6IS14	154 aa	Known RBP	13.29	□□□□□ -0.28
CLDND1-222	ENST00000510545	HSD17B11	Q8NBQ5	300 aa		13.29	□□□□□ -0.28
CLDND1-222	ENST00000510545	RPUSD1	Q9UJJ7	312 aa	Known RBP	13.29	□□□□□ -0.28
CLDND1-222	ENST00000510545	DVL1	O14640	695 aa		13.28	□□□□□ -0.28
CLDND1-222	ENST00000510545	ZG16	O60844	167 aa		13.28	□□□□□ -0.28
CLDND1-222	ENST00000510545	GNLY	P22749	145 aa		13.28	□□□□□ -0.28
CLDND1-222	ENST00000510545	RAB7A	P51149	207 aa		13.28	□□□□□ -0.28
CLDND1-222	ENST00000510545	TAGLN	Q01995	201 aa	Known RBP	13.28	□□□□□ -0.28
CLDND1-222	ENST00000510545	TMEM267	Q0VDI3	215 aa	Predicted RBP	13.28	□□□□□ -0.28
CLDND1-222	ENST00000510545	SMIM8	Q96KF7	97 aa		13.28	□□□□□ -0.28
CLDND1-222	ENST00000510545	TAS2R3	Q9NYW6	316 aa		13.28	□□□□□ -0.28
CLDND1-222	ENST00000510545	WSB1	Q9Y6I7	421 aa		13.28	□□□□□ -0.28
CLDND1-222	ENST00000510545	IGSF10	Q6WRI0	2623 aa		13.28	□□□□□ -0.28
CLDND1-222	ENST00000510545	NDUFB3	O43676	98 aa		13.28	□□□□□ -0.28
CLDND1-222	ENST00000510545	SPP1	P10451	314 aa		13.28	□□□□□ -0.28
CLDND1-222	ENST00000510545	MEF2C	Q06413	473 aa	Predicted RBP	13.28	□□□□□ -0.28
CLDND1-222	ENST00000510545	HFE	Q30201	348 aa		13.28	□□□□□ -0.28
CLDND1-222	ENST00000510545	LYG1	Q8N1E2	194 aa		13.28	□□□□□ -0.28
CLDND1-222	ENST00000510545	DDB2	Q92466	427 aa		13.28	□□□□□ -0.28
CLDND1-222	ENST00000510545	GAB2	Q9UQC2	676 aa		13.28	□□□□□ -0.28
CLDND1-222	ENST00000510545	TMEM8B	A6NDV4	472 aa		13.27	□□□□□ -0.28
CLDND1-222	ENST00000510545	MARCH11	A6NNE9	402 aa		13.27	□□□□□ -0.28
CLDND1-222	ENST00000510545	RAB29	O14966	203 aa		13.27	□□□□□ -0.28
CLDND1-222	ENST00000510545	MED6	O75586	246 aa		13.27	□□□□□ -0.28
CLDND1-222	ENST00000510545	UBE2K	P61086	200 aa		13.27	□□□□□ -0.28
CLDND1-222	ENST00000510545	RPL23A	P62750	156 aa	Known RBP	13.27	□□□□□ -0.28
CLDND1-222	ENST00000510545	TNFRSF9	Q07011	255 aa		13.27	□□□□□ -0.28
CLDND1-222	ENST00000510545	BAX	Q07812	192 aa		13.27	□□□□□ -0.28
CLDND1-222	ENST00000510545	H1FX	Q92522	213 aa	Known RBP	13.27	□□□□□ -0.28
CLDND1-222	ENST00000510545	R3HDM4	Q96D70	268 aa		13.27	□□□□□ -0.28
CLDND1-222	ENST00000510545	RBKS	Q9H477	322 aa		13.27	□□□□□ -0.28
CLDND1-222	ENST00000510545	KAAG1	Q9UBP8	84 aa		13.27	□□□□□ -0.28
CLDND1-222	ENST00000510545	HSPB7	Q9UBY9	170 aa		13.27	□□□□□ -0.28
CLDND1-222	ENST00000510545	SEC11B	P0C7V7	166 aa		13.27	□□□□□ -0.29
CLDND1-222	ENST00000510545	ARL16	Q0P5N6	197 aa		13.27	□□□□□ -0.29
CLDND1-222	ENST00000510545	BTN1A1	Q13410	526 aa		13.27	□□□□□ -0.29
CLDND1-222	ENST00000510545	LRRC10	Q5BKY1	277 aa		13.27	□□□□□ -0.29
CLDND1-222	ENST00000510545	H2BFWT	Q7Z2G1	175 aa		13.27	□□□□□ -0.29
CLDND1-222	ENST00000510545	HAPLN4	Q86UW8	402 aa		13.27	□□□□□ -0.29
CLDND1-222	ENST00000510545	STPG2	Q8N412	459 aa		13.27	□□□□□ -0.29
CLDND1-222	ENST00000510545	CD300LF	Q8TDQ1	290 aa		13.27	□□□□□ -0.29
CLDND1-222	ENST00000510545	MARC2	Q969Z3	335 aa		13.27	□□□□□ -0.29
CLDND1-222	ENST00000510545	MS4A7	Q9GZW8	240 aa	Predicted RBP	13.27	□□□□□ -0.29
CLDND1-222	ENST00000510545	PSENEN	Q9NZ42	101 aa		13.27	□□□□□ -0.29
CLDND1-222	ENST00000510545	FAM90A26	D6RGX4	464 aa		13.26	□□□□□ -0.29
CLDND1-222	ENST00000510545	ATG12	O94817	140 aa		13.26	□□□□□ -0.29
CLDND1-222	ENST00000510545	HPRT1	P00492	218 aa		13.26	□□□□□ -0.29
CLDND1-222	ENST00000510545	OR9G9	P0C7N8	305 aa		13.26	□□□□□ -0.29
CLDND1-222	ENST00000510545	SULT1A1	P50225	295 aa		13.26	□□□□□ -0.29
CLDND1-222	ENST00000510545	MRPS11	P82912	194 aa	Known RBP	13.26	□□□□□ -0.29
CLDND1-222	ENST00000510545	SLC25A48	Q6ZT89	311 aa	Known RBP	13.26	□□□□□ -0.29
CLDND1-222	ENST00000510545	VKORC1L1	Q8N0U8	176 aa		13.26	□□□□□ -0.29
CLDND1-222	ENST00000510545	ITLN2	Q8WWU7	325 aa	Predicted RBP	13.26	□□□□□ -0.29
CLDND1-222	ENST00000510545	SAT2	Q96F10	170 aa	Predicted RBP	13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms