RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 CD300EQ496F6 205 aaPredicted RBP12.09□□□□□ -0.47
CXCL1-202ENST00000509101 ZNF880Q6PDB4 577 aa12.09□□□□□ -0.47
CXCL1-202ENST00000509101 MOB1BQ7L9L4 216 aa12.09□□□□□ -0.47
CXCL1-202ENST00000509101 PDPNQ86YL7 162 aa12.09□□□□□ -0.47
CXCL1-202ENST00000509101 ZNF383Q8NA42 475 aa12.09□□□□□ -0.47
CXCL1-202ENST00000509101 EDARADDQ8WWZ3 215 aa12.09□□□□□ -0.47
CXCL1-202ENST00000509101 UQCC2Q9BRT2 126 aa12.09□□□□□ -0.47
CXCL1-202ENST00000509101 C11orf54Q9H0W9 315 aaPredicted RBP12.09□□□□□ -0.47
CXCL1-202ENST00000509101 KCNK15Q9H427 330 aa12.09□□□□□ -0.47
CXCL1-202ENST00000509101 COA4Q9NYJ1 87 aa12.09□□□□□ -0.47
CXCL1-202ENST00000509101 PEMTQ9UBM1 199 aa12.09□□□□□ -0.47
CXCL1-202ENST00000509101 DIMT1Q9UNQ2 313 aaKnown RBP12.09□□□□□ -0.47
CXCL1-202ENST00000509101 EXOSC1Q9Y3B2 195 aaKnown RBP12.09□□□□□ -0.47
CXCL1-202ENST00000509101 KMT2AQ03164 3969 aa12.09□□□□□ -0.47
CXCL1-202ENST00000509101 PROP1O75360 226 aa12.08□□□□□ -0.48
CXCL1-202ENST00000509101 APELAP0DMC3 54 aa12.08□□□□□ -0.48
CXCL1-202ENST00000509101 LGALS7P47929 136 aa12.08□□□□□ -0.48
CXCL1-202ENST00000509101 MECP2P51608 486 aaKnown RBP12.08□□□□□ -0.48
CXCL1-202ENST00000509101 HLA-DRB3P79483 266 aa12.08□□□□□ -0.48
CXCL1-202ENST00000509101 LAX1Q8IWV1 398 aa12.08□□□□□ -0.48
CXCL1-202ENST00000509101 TMEM80Q96HE8 168 aa12.08□□□□□ -0.48
CXCL1-202ENST00000509101 NICN1Q9BSH3 213 aa12.08□□□□□ -0.48
CXCL1-202ENST00000509101 TMEM59Q9BXS4 323 aa12.08□□□□□ -0.48
CXCL1-202ENST00000509101 SLC2A8Q9NY64 477 aa12.08□□□□□ -0.48
CXCL1-202ENST00000509101 GHRLQ9UBU3 117 aa12.08□□□□□ -0.48
CXCL1-202ENST00000509101 A0A0B4J203 849 aa12.07□□□□□ -0.48
CXCL1-202ENST00000509101 IRGMA1A4Y4 181 aa12.07□□□□□ -0.48
CXCL1-202ENST00000509101 RBMXL2O75526 392 aaKnown RBP12.07□□□□□ -0.48
CXCL1-202ENST00000509101 HTR2CP28335 458 aa12.07□□□□□ -0.48
CXCL1-202ENST00000509101 CEACAM6P40199 344 aa12.07□□□□□ -0.48
CXCL1-202ENST00000509101 RPS27AP62979 156 aaKnown RBP12.07□□□□□ -0.48
CXCL1-202ENST00000509101 ST3GAL4Q11206 333 aa12.07□□□□□ -0.48
CXCL1-202ENST00000509101 BPIFB6Q8NFQ5 453 aa12.07□□□□□ -0.48
CXCL1-202ENST00000509101 DYNLRB2Q8TF09 96 aa12.07□□□□□ -0.48
CXCL1-202ENST00000509101 HDHD3Q9BSH5 251 aaPredicted RBP12.07□□□□□ -0.48
CXCL1-202ENST00000509101 VCXQ9H320 206 aa12.07□□□□□ -0.48
CXCL1-202ENST00000509101 SLC35D1Q9NTN3 355 aa12.07□□□□□ -0.48
CXCL1-202ENST00000509101 ZNF221Q9UK13 617 aa12.07□□□□□ -0.48
CXCL1-202ENST00000509101 DNAH10Q8IVF4 4471 aa12.06□□□□□ -0.48
CXCL1-202ENST00000509101 ZNF785A8K8V0 405 aa12.06□□□□□ -0.48
CXCL1-202ENST00000509101 OR11H12B2RN74 326 aa12.06□□□□□ -0.48
CXCL1-202ENST00000509101 M0R1X1 148 aa12.06□□□□□ -0.48
CXCL1-202ENST00000509101 BMPR1BO00238 502 aa12.06□□□□□ -0.48
CXCL1-202ENST00000509101 IGLV2-23P01705 113 aa12.06□□□□□ -0.48
CXCL1-202ENST00000509101 UBBP0CG47 229 aa12.06□□□□□ -0.48
CXCL1-202ENST00000509101 ZBTB25P24278 435 aa12.06□□□□□ -0.48
CXCL1-202ENST00000509101 PMS2P11Q13670 270 aa12.06□□□□□ -0.48
CXCL1-202ENST00000509101 GUCA2BQ16661 112 aa12.06□□□□□ -0.48
CXCL1-202ENST00000509101 AHSA2Q719I0 299 aa12.06□□□□□ -0.48
CXCL1-202ENST00000509101 ZNF485Q8NCK3 441 aa12.06□□□□□ -0.48
CXCL1-202ENST00000509101 SNAPC3Q92966 411 aa12.06□□□□□ -0.48
CXCL1-202ENST00000509101 USMG5Q96IX5 58 aa12.06□□□□□ -0.48
CXCL1-202ENST00000509101 TMEM68Q96MH6 324 aa12.06□□□□□ -0.48
CXCL1-202ENST00000509101 PHB2Q99623 299 aa12.06□□□□□ -0.48
CXCL1-202ENST00000509101 PLCXD1Q9NUJ7 323 aa12.06□□□□□ -0.48
CXCL1-202ENST00000509101 PSORS1C1Q9UIG5 152 aa12.06□□□□□ -0.48
CXCL1-202ENST00000509101 AIREO43918 545 aa12.05□□□□□ -0.48
CXCL1-202ENST00000509101 UNC119Q13432 240 aa12.05□□□□□ -0.48
CXCL1-202ENST00000509101 MED21Q13503 144 aa12.05□□□□□ -0.48
CXCL1-202ENST00000509101 EXOSC2Q13868 293 aaKnown RBP12.05□□□□□ -0.48
CXCL1-202ENST00000509101 HARBI1Q96MB7 349 aa12.05□□□□□ -0.48
CXCL1-202ENST00000509101 ST6GALNAC5Q9BVH7 336 aa12.05□□□□□ -0.48
CXCL1-202ENST00000509101 PLEKHJ1Q9NW61 149 aa12.05□□□□□ -0.48
CXCL1-202ENST00000509101 FKBP14Q9NWM8 211 aa12.05□□□□□ -0.48
CXCL1-202ENST00000509101 AK3Q9UIJ7 227 aa12.05□□□□□ -0.48
CXCL1-202ENST00000509101 A0A0A6YYD4 124 aa12.04□□□□□ -0.48
CXCL1-202ENST00000509101 TRBV6-6A0A0A6YYG2 114 aa12.04□□□□□ -0.48
CXCL1-202ENST00000509101 CXorf65A6NEN9 183 aa12.04□□□□□ -0.48
CXCL1-202ENST00000509101 EFCAB10A6NFE3 127 aa12.04□□□□□ -0.48
CXCL1-202ENST00000509101 CRYGBP07316 175 aa12.04□□□□□ -0.48
CXCL1-202ENST00000509101 SCTP09683 121 aa12.04□□□□□ -0.48
CXCL1-202ENST00000509101 EDN2P20800 178 aa12.04□□□□□ -0.48
CXCL1-202ENST00000509101 TAS2R43P59537 309 aa12.04□□□□□ -0.48
CXCL1-202ENST00000509101 ADAD2Q8NCV1 583 aaKnown RBP12.04□□□□□ -0.48
CXCL1-202ENST00000509101 DDB2Q92466 427 aa12.04□□□□□ -0.48
CXCL1-202ENST00000509101 PTX4Q96A99 478 aa12.04□□□□□ -0.48
CXCL1-202ENST00000509101 TM2D1Q9BX74 207 aa12.04□□□□□ -0.48
CXCL1-202ENST00000509101 ATP6V1G2O95670 118 aa12.03□□□□□ -0.48
CXCL1-202ENST00000509101 PRH1P02810 166 aa12.03□□□□□ -0.48
CXCL1-202ENST00000509101 CELP19835 753 aa12.03□□□□□ -0.48
CXCL1-202ENST00000509101 MAPK3P27361 379 aaPredicted RBP12.03□□□□□ -0.48
CXCL1-202ENST00000509101 RHOGP84095 191 aa12.03□□□□□ -0.48
CXCL1-202ENST00000509101 INSL4Q14641 139 aa12.03□□□□□ -0.48
CXCL1-202ENST00000509101 KCNG3Q8TAE7 436 aa12.03□□□□□ -0.48
CXCL1-202ENST00000509101 WDR89Q96FK6 387 aaPredicted RBP12.03□□□□□ -0.48
CXCL1-202ENST00000509101 AKIP1Q9NQ31 210 aa12.03□□□□□ -0.48
CXCL1-202ENST00000509101 ZNF230Q9UIE0 474 aaPredicted RBP12.03□□□□□ -0.48
CXCL1-202ENST00000509101 SELENOKQ9Y6D0 94 aa12.03□□□□□ -0.48
CXCL1-202ENST00000509101 HECTD4Q9Y4D8 3996 aa12.02□□□□□ -0.48
CXCL1-202ENST00000509101 IGKV1-6A0A0C4DH72 117 aa12.02□□□□□ -0.49
CXCL1-202ENST00000509101 MSGN1A6NI15 193 aa12.02□□□□□ -0.49
CXCL1-202ENST00000509101 MPPED1O15442 326 aa12.02□□□□□ -0.49
CXCL1-202ENST00000509101 OR9G9P0C7N8 305 aa12.02□□□□□ -0.49
CXCL1-202ENST00000509101 TNXAQ16473 311 aa12.02□□□□□ -0.49
CXCL1-202ENST00000509101 DEFB114Q30KQ6 69 aa12.02□□□□□ -0.49
CXCL1-202ENST00000509101 RBM48Q5RL73 367 aaKnown RBP12.02□□□□□ -0.49
CXCL1-202ENST00000509101 IZUMO2Q6UXV1 221 aa12.02□□□□□ -0.49
CXCL1-202ENST00000509101 THRSPQ92748 146 aa12.02□□□□□ -0.49
CXCL1-202ENST00000509101 RIMS4Q9H426 269 aaPredicted RBP12.02□□□□□ -0.49
CXCL1-202ENST00000509101 ZC4H2Q9NQZ6 224 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms