RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 FLYWCH2Q96CP2 140 aaKnown RBP7.3□□□□□ -1.24
NUP54-207ENST00000508583 TSNAXQ99598 290 aaKnown RBP7.3□□□□□ -1.24
NUP54-207ENST00000508583 GON7Q9BXV9 100 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 PARP12Q9H0J9 701 aaKnown RBP7.3□□□□□ -1.24
NUP54-207ENST00000508583 MIXL1Q9H2W2 232 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 LIN7CQ9NUP9 197 aaKnown RBP7.3□□□□□ -1.24
NUP54-207ENST00000508583 SDHAF2Q9NX18 166 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 MTFP1Q9UDX5 166 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 TENM1Q9UKZ4 2725 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 DPPA5A6NC42 116 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 NBR2O15453 112 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 CREBL2O60519 120 aaPredicted RBP7.29□□□□□ -1.24
NUP54-207ENST00000508583 SPDEFO95238 335 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 PMP2P02689 132 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 CSF1P09603 554 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 AADACP22760 399 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 HLA-DMAP28067 261 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 TNFSF8P32971 234 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 ECI1P42126 302 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 KIR2DS2P43631 304 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 LGALS7P47929 136 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 AP3S2P59780 193 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 CATR1Q13166 79 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 MEF2DQ14814 521 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 PLGLAQ15195 96 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 RNASE10Q5GAN6 216 aaKnown RBP7.29□□□□□ -1.24
NUP54-207ENST00000508583 VAX1Q5SQQ9 334 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 DHRS11Q6UWP2 260 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 FAM131AQ6UXB0 335 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 ZNF66Q6ZN08 573 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 KCTD9Q7L273 389 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 FOXRED2Q8IWF2 684 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 CMTM1Q8IZ96 169 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 ARRDC1Q8N5I2 433 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 Q8N6K4 173 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 POC5Q8NA72 575 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 SECTM1Q8WVN6 248 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 ABHD1Q96SE0 405 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 AIFM2Q9BRQ8 373 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 ZNF747Q9BV97 191 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 SLC5A7Q9GZV3 580 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 ZNF702PQ9H963 129 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 BATF3Q9NR55 127 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 SLC35D1Q9NTN3 355 aa7.29□□□□□ -1.24
NUP54-207ENST00000508583 RBMX2Q9Y388 322 aaKnown RBP7.29□□□□□ -1.24
NUP54-207ENST00000508583 GSTZ1O43708 216 aaPredicted RBP7.28□□□□□ -1.24
NUP54-207ENST00000508583 FCER2P06734 321 aa7.28□□□□□ -1.24
NUP54-207ENST00000508583 DUTP33316 252 aaKnown RBP7.28□□□□□ -1.24
NUP54-207ENST00000508583 FAUP35544 74 aaKnown RBP7.28□□□□□ -1.24
NUP54-207ENST00000508583 RFX2P48378 723 aa7.28□□□□□ -1.24
NUP54-207ENST00000508583 PROK1P58294 105 aa7.28□□□□□ -1.24
NUP54-207ENST00000508583 FXYD4P59646 89 aa7.28□□□□□ -1.24
NUP54-207ENST00000508583 RPS16P62249 146 aaKnown RBP7.28□□□□□ -1.24
NUP54-207ENST00000508583 BLCAPP62952 87 aa7.28□□□□□ -1.24
NUP54-207ENST00000508583 C9orf152Q5JTZ5 239 aa7.28□□□□□ -1.24
NUP54-207ENST00000508583 SLC35E3Q7Z769 313 aa7.28□□□□□ -1.24
NUP54-207ENST00000508583 TMEM229BQ8NBD8 167 aa7.28□□□□□ -1.24
NUP54-207ENST00000508583 DRAXINQ8NBI3 349 aaPredicted RBP7.28□□□□□ -1.24
NUP54-207ENST00000508583 NPBQ8NG41 125 aa7.28□□□□□ -1.24
NUP54-207ENST00000508583 OR52I2Q8NH67 350 aa7.28□□□□□ -1.24
NUP54-207ENST00000508583 OR4S2Q8NH73 311 aa7.28□□□□□ -1.24
NUP54-207ENST00000508583 CD300LFQ8TDQ1 290 aa7.28□□□□□ -1.24
NUP54-207ENST00000508583 WFDC12Q8WWY7 111 aa7.28□□□□□ -1.24
NUP54-207ENST00000508583 DEDD2Q8WXF8 326 aa7.28□□□□□ -1.24
NUP54-207ENST00000508583 MOB3AQ96BX8 217 aa7.28□□□□□ -1.24
NUP54-207ENST00000508583 ZNF2Q9BSG1 426 aaPredicted RBP7.28□□□□□ -1.24
NUP54-207ENST00000508583 IGKV1D-13A0A0B4J2D9 117 aa7.27□□□□□ -1.25
NUP54-207ENST00000508583 AP4M1O00189 453 aa7.27□□□□□ -1.25
NUP54-207ENST00000508583 SHOXO15266 292 aa7.27□□□□□ -1.25
NUP54-207ENST00000508583 NDUFA3O95167 84 aa7.27□□□□□ -1.25
NUP54-207ENST00000508583 RAB3DO95716 219 aa7.27□□□□□ -1.25
NUP54-207ENST00000508583 IGKV1-13P0DP09 117 aa7.27□□□□□ -1.25
NUP54-207ENST00000508583 SLC35B1P78383 322 aa7.27□□□□□ -1.25
NUP54-207ENST00000508583 VMA21Q3ZAQ7 101 aa7.27□□□□□ -1.25
NUP54-207ENST00000508583 PYDC2Q56P42 97 aa7.27□□□□□ -1.25
NUP54-207ENST00000508583 RNASE12Q5GAN4 147 aaKnown RBP7.27□□□□□ -1.25
NUP54-207ENST00000508583 STEAP1BQ6NZ63 245 aa7.27□□□□□ -1.25
NUP54-207ENST00000508583 GLDNQ6ZMI3 551 aaPredicted RBP7.27□□□□□ -1.25
NUP54-207ENST00000508583 LYSMD2Q8IV50 215 aa7.27□□□□□ -1.25
NUP54-207ENST00000508583 SLC38A6Q8IZM9 456 aa7.27□□□□□ -1.25
NUP54-207ENST00000508583 FAM71E2Q8N5Q1 922 aa7.27□□□□□ -1.25
NUP54-207ENST00000508583 Q8N9W7 124 aa7.27□□□□□ -1.25
NUP54-207ENST00000508583 ZNF383Q8NA42 475 aa7.27□□□□□ -1.25
NUP54-207ENST00000508583 BVESQ8NE79 360 aa7.27□□□□□ -1.25
NUP54-207ENST00000508583 VSTM2AQ8TAG5 236 aa7.27□□□□□ -1.25
NUP54-207ENST00000508583 OSR1Q8TAX0 266 aaPredicted RBP7.27□□□□□ -1.25
NUP54-207ENST00000508583 CHPT1Q8WUD6 406 aa7.27□□□□□ -1.25
NUP54-207ENST00000508583 TCTEX1D2Q8WW35 142 aa7.27□□□□□ -1.25
NUP54-207ENST00000508583 HARBI1Q96MB7 349 aa7.27□□□□□ -1.25
NUP54-207ENST00000508583 KLK11Q9UBX7 282 aa7.27□□□□□ -1.25
NUP54-207ENST00000508583 DISC1C4P0D8 188 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 J3QRK9 145 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 GPR31O00270 319 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 RRHO14718 337 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 RBFOX2O43251 390 aaKnown RBP eCLIP7.26□□□□□ -1.25
NUP54-207ENST00000508583 HRASP01112 189 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 IGHG2P01859 326 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 HLA-DRB1P01911 266 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 CD74P04233 296 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 CD3DP04234 171 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms