RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 IGFBP3P17936 291 aaPredicted RBP3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 KLK2P20151 261 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 TUBG1P23258 451 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 ATP6V0CP27449 155 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 CTRLP40313 264 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 MDH2P40926 338 aaKnown RBP3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 GRK6P43250 576 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 REG1BP48304 166 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 ZNF133P52736 654 aaPredicted RBP3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 RHOBP62745 196 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 CSNK2A1P68400 391 aaPredicted RBP3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 MEF2BQ02080 365 aaPredicted RBP3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 FMODQ06828 376 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 FAM27E3Q08E93 113 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 FOXF1Q12946 379 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 RAB31Q13636 194 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 MMDQ15546 238 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 OR1Q1Q15612 314 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 ABCA11PQ4W5N1 156 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 PSMG4Q5JS54 123 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 ZNF776Q68DI1 518 aaPredicted RBP3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 STUMQ69YW2 141 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 FA2HQ7L5A8 372 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 MOB1BQ7L9L4 216 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 BAGE3Q86Y29 109 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 BAGE2Q86Y30 109 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 MUC15Q8N387 334 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 STPG4Q8N801 248 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 ADAD2Q8NCV1 583 aaKnown RBP3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 CSNK2A3Q8NEV1 391 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 OR11H1Q8NG94 326 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 OR2Y1Q8NGV0 311 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 OR11H2Q8NH07 326 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 PLPPR1Q8TBJ4 325 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 SCGB1C1Q8TD33 95 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 VN1R17PQ8TDU5 208 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 DOK4Q8TEW6 326 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 TMEM37Q8WXS4 190 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 SLC25A44Q96H78 314 aaPredicted RBP3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 SIGLEC12Q96PQ1 595 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 ATP5SQ99766 215 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 PRSS27Q9BQR3 290 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 C16orf70Q9BSU1 422 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 STRADBQ9C0K7 418 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 VCX2Q9H322 139 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 GLIPR2Q9H4G4 154 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 PATZ1Q9HBE1 687 aaKnown RBP3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 ST20Q9HBF5 79 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 TMEM38BQ9NVV0 291 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 FAM206AQ9NX38 181 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 KCNIP1Q9NZI2 227 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 LHX3Q9UBR4 397 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 MRM2Q9UI43 246 aaKnown RBP3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 RHBDD3Q9Y3P4 386 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 TIMM9Q9Y5J7 89 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 SPACA6W5XKT8 324 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 NUP210LQ5VU65 1888 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 ITPR1Q14643 2758 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 NUP214P35658 2090 aaPredicted RBP3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 TRAV9-2A0A087WT02 112 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 A0A0B4J2E0 115 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 A0A1B0GX12 115 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 GAGE10A6NGK3 116 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 H3BMH7 237 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 J3QKU1 62 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 PLPP1O14494 284 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 HYPMO75409 117 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 S1PR2O95136 353 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 CD160O95971 181 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 CLEC3BP05452 202 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 STAG3L2P0CL84 134 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 PNMTP11086 282 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 HIST1H1CP16403 213 aaKnown RBP3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 AADACP22760 399 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 F2RP25116 425 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 SSR2P43308 183 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 TFPI2P48307 235 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 ZNF136P52737 540 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 EFNB2P52799 333 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 SNRPD1P62314 119 aaKnown RBP3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 SUPT4H1P63272 117 aaKnown RBP3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 HBG1P69891 147 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 HBG2P69892 147 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 CCL7P80098 99 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 EWSR1Q01844 656 aaKnown RBP eCLIP3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 TMEM267Q0VDI3 215 aaPredicted RBP3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 TSTA3Q13630 321 aaPredicted RBP3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 ARFRP1Q13795 201 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 P2RY6Q15077 328 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 MLF2Q15773 248 aaPredicted RBP3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 ANKRD55Q3KP44 614 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 FAM69BQ5VUD6 431 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 CST9LP1Q5W188 147 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 WDR25Q64LD2 544 aaPredicted RBP3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 OR4C11Q6IEV9 310 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 PLXDC2Q6UX71 529 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 TMEM144Q7Z5S9 345 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 LRP11Q86VZ4 500 aa3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.82□□□□□ -1.8
PDLIM5-211ENST00000508531 DEFB125Q8N687 156 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms