RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 IGKV1D-8A0A087WSZ0 117 aa15.6■□□□□ 0.09
SFXN1-209ENST00000508290 TRAV41A0A0B4J266 112 aa15.6■□□□□ 0.09
SFXN1-209ENST00000508290 XRCC3O43542 346 aa15.6■□□□□ 0.09
SFXN1-209ENST00000508290 CNTFRP26992 372 aa15.6■□□□□ 0.09
SFXN1-209ENST00000508290 PSMB8P28062 276 aa15.6■□□□□ 0.09
SFXN1-209ENST00000508290 MYCNOSP40205 109 aa15.6■□□□□ 0.09
SFXN1-209ENST00000508290 LUMP51884 338 aaPredicted RBP15.6■□□□□ 0.09
SFXN1-209ENST00000508290 RPS16P62249 146 aaKnown RBP15.6■□□□□ 0.09
SFXN1-209ENST00000508290 BEAN1Q3B7T3 259 aa15.6■□□□□ 0.09
SFXN1-209ENST00000508290 ZNF645Q8N7E2 425 aa15.6■□□□□ 0.09
SFXN1-209ENST00000508290 KLHL30-AS1Q8NEE0 82 aa15.6■□□□□ 0.09
SFXN1-209ENST00000508290 CMTM3Q96MX0 182 aa15.6■□□□□ 0.09
SFXN1-209ENST00000508290 FUNDC2Q9BWH2 189 aa15.6■□□□□ 0.09
SFXN1-209ENST00000508290 AUNIPQ9H7T9 357 aa15.6■□□□□ 0.09
SFXN1-209ENST00000508290 ATP6V0E1O15342 81 aa15.59■□□□□ 0.09
SFXN1-209ENST00000508290 SSX5O60225 188 aa15.59■□□□□ 0.09
SFXN1-209ENST00000508290 IGKV1-16P04430 117 aa15.59■□□□□ 0.09
SFXN1-209ENST00000508290 PPIFP30405 207 aaKnown RBP15.59■□□□□ 0.09
SFXN1-209ENST00000508290 ARPC4P59998 168 aa15.59■□□□□ 0.09
SFXN1-209ENST00000508290 PSG5Q15238 335 aa15.59■□□□□ 0.09
SFXN1-209ENST00000508290 PDLIM3Q53GG5 364 aaPredicted RBP15.59■□□□□ 0.09
SFXN1-209ENST00000508290 TMEM65Q6PI78 240 aa15.59■□□□□ 0.09
SFXN1-209ENST00000508290 ZNF562Q6V9R5 426 aa15.59■□□□□ 0.09
SFXN1-209ENST00000508290 HOGA1Q86XE5 327 aa15.59■□□□□ 0.09
SFXN1-209ENST00000508290 BEST4Q8NFU0 473 aa15.59■□□□□ 0.09
SFXN1-209ENST00000508290 ACOT12Q8WYK0 555 aa15.59■□□□□ 0.09
SFXN1-209ENST00000508290 FBXL15Q9H469 300 aa15.59■□□□□ 0.09
SFXN1-209ENST00000508290 METTL1Q9UBP6 276 aaKnown RBP15.59■□□□□ 0.09
SFXN1-209ENST00000508290 G3V4G9 280 aa15.58■□□□□ 0.08
SFXN1-209ENST00000508290 HLA-DQB1P01920 261 aa15.58■□□□□ 0.08
SFXN1-209ENST00000508290 LSM3P62310 102 aaKnown RBP15.58■□□□□ 0.08
SFXN1-209ENST00000508290 CX3CL1P78423 397 aa15.58■□□□□ 0.08
SFXN1-209ENST00000508290 MSMO1Q15800 293 aa15.58■□□□□ 0.08
SFXN1-209ENST00000508290 TMEM177Q53S58 311 aa15.58■□□□□ 0.08
SFXN1-209ENST00000508290 PYHIN1Q6K0P9 492 aa15.58■□□□□ 0.08
SFXN1-209ENST00000508290 MCRIP2Q9BUT9 160 aaKnown RBP15.58■□□□□ 0.08
SFXN1-209ENST00000508290 WIPF1O43516 503 aa15.57■□□□□ 0.08
SFXN1-209ENST00000508290 IGLV1-40P01703 118 aa15.57■□□□□ 0.08
SFXN1-209ENST00000508290 RPLP1P05386 114 aaKnown RBP15.57■□□□□ 0.08
SFXN1-209ENST00000508290 DUTP33316 252 aaKnown RBP15.57■□□□□ 0.08
SFXN1-209ENST00000508290 SAMD12Q8N8I0 201 aa15.57■□□□□ 0.08
SFXN1-209ENST00000508290 LINC00482Q8N8I6 264 aa15.57■□□□□ 0.08
SFXN1-209ENST00000508290 MINDY2Q8NBR6 621 aa15.57■□□□□ 0.08
SFXN1-209ENST00000508290 MYOZ3Q8TDC0 251 aa15.57■□□□□ 0.08
SFXN1-209ENST00000508290 UBE2E2Q96LR5 201 aa15.57■□□□□ 0.08
SFXN1-209ENST00000508290 NECAP2Q9NVZ3 263 aa15.57■□□□□ 0.08
SFXN1-209ENST00000508290 PRELID3BQ9Y3B1 194 aa15.57■□□□□ 0.08
SFXN1-209ENST00000508290 TUSC2O75896 110 aa15.56■□□□□ 0.08
SFXN1-209ENST00000508290 CD40LGP29965 261 aa15.56■□□□□ 0.08
SFXN1-209ENST00000508290 AKIRIN2Q53H80 203 aa15.56■□□□□ 0.08
SFXN1-209ENST00000508290 TMEM69Q5SWH9 247 aa15.56■□□□□ 0.08
SFXN1-209ENST00000508290 C8orf86Q6ZUL3 223 aa15.56■□□□□ 0.08
SFXN1-209ENST00000508290 PPP1R27Q86WC6 154 aa15.56■□□□□ 0.08
SFXN1-209ENST00000508290 ANKRD13BQ86YJ7 626 aa15.56■□□□□ 0.08
SFXN1-209ENST00000508290 C1QL4Q86Z23 238 aa15.56■□□□□ 0.08
SFXN1-209ENST00000508290 OR5M8Q8NGP6 311 aa15.56■□□□□ 0.08
SFXN1-209ENST00000508290 OSR1Q8TAX0 266 aaPredicted RBP15.56■□□□□ 0.08
SFXN1-209ENST00000508290 C4orf3Q8WVX3 66 aa15.56■□□□□ 0.08
SFXN1-209ENST00000508290 DDB2Q92466 427 aa15.56■□□□□ 0.08
SFXN1-209ENST00000508290 HARBI1Q96MB7 349 aa15.56■□□□□ 0.08
SFXN1-209ENST00000508290 HSD17B10Q99714 261 aaKnown RBP15.56■□□□□ 0.08
SFXN1-209ENST00000508290 MRPS26Q9BYN8 205 aaKnown RBP15.56■□□□□ 0.08
SFXN1-209ENST00000508290 FOXA2Q9Y261 457 aaPredicted RBP15.56■□□□□ 0.08
SFXN1-209ENST00000508290 MRPS7Q9Y2R9 242 aaKnown RBP15.56■□□□□ 0.08
SFXN1-209ENST00000508290 SHOXO15266 292 aa15.55■□□□□ 0.08
SFXN1-209ENST00000508290 CREBL2O60519 120 aaPredicted RBP15.55■□□□□ 0.08
SFXN1-209ENST00000508290 GABARAPO95166 117 aa15.55■□□□□ 0.08
SFXN1-209ENST00000508290 APOA1P02647 267 aa15.55■□□□□ 0.08
SFXN1-209ENST00000508290 NFYAP23511 347 aaPredicted RBP15.55■□□□□ 0.08
SFXN1-209ENST00000508290 TGFBR1P36897 503 aa15.55■□□□□ 0.08
SFXN1-209ENST00000508290 NCS1P62166 190 aa15.55■□□□□ 0.08
SFXN1-209ENST00000508290 ETV3LQ6ZN32 361 aa15.55■□□□□ 0.08
SFXN1-209ENST00000508290 MRPL41Q8IXM3 137 aaKnown RBP15.55■□□□□ 0.08
SFXN1-209ENST00000508290 ABHD5Q8WTS1 349 aa15.55■□□□□ 0.08
SFXN1-209ENST00000508290 AP3S1Q92572 193 aa15.55■□□□□ 0.08
SFXN1-209ENST00000508290 BORCS5Q969J3 196 aa15.55■□□□□ 0.08
SFXN1-209ENST00000508290 RBMXL1Q96E39 390 aaKnown RBP15.55■□□□□ 0.08
SFXN1-209ENST00000508290 TMEM68Q96MH6 324 aa15.55■□□□□ 0.08
SFXN1-209ENST00000508290 P2RX4Q99571 388 aa15.55■□□□□ 0.08
SFXN1-209ENST00000508290 ZMAT5Q9UDW3 170 aaKnown RBP15.55■□□□□ 0.08
SFXN1-209ENST00000508290 WSB1Q9Y6I7 421 aa15.55■□□□□ 0.08
SFXN1-209ENST00000508290 CMYA5Q8N3K9 4069 aa15.55■□□□□ 0.08
SFXN1-209ENST00000508290 SMIM31A0A1B0GVY4 71 aa15.54■□□□□ 0.08
SFXN1-209ENST00000508290 G3V318 75 aa15.54■□□□□ 0.08
SFXN1-209ENST00000508290 SLC25A17O43808 307 aa15.54■□□□□ 0.08
SFXN1-209ENST00000508290 CA2P00918 260 aa15.54■□□□□ 0.08
SFXN1-209ENST00000508290 SMIM18P0DKX4 95 aa15.54■□□□□ 0.08
SFXN1-209ENST00000508290 RORCP51449 518 aa15.54■□□□□ 0.08
SFXN1-209ENST00000508290 VMA21Q3ZAQ7 101 aa15.54■□□□□ 0.08
SFXN1-209ENST00000508290 OXLD1Q5BKU9 147 aa15.54■□□□□ 0.08
SFXN1-209ENST00000508290 C19orf54Q5BKX5 351 aa15.54■□□□□ 0.08
SFXN1-209ENST00000508290 OVCH2Q7RTZ1 564 aa15.54■□□□□ 0.08
SFXN1-209ENST00000508290 BVESQ8NE79 360 aa15.54■□□□□ 0.08
SFXN1-209ENST00000508290 ARPC1AQ92747 370 aa15.54■□□□□ 0.08
SFXN1-209ENST00000508290 DPF1Q92782 380 aa15.54■□□□□ 0.08
SFXN1-209ENST00000508290 IFT46Q9NQC8 304 aa15.54■□□□□ 0.08
SFXN1-209ENST00000508290 VSIG4Q9Y279 399 aa15.54■□□□□ 0.08
SFXN1-209ENST00000508290 RBMX2Q9Y388 322 aaKnown RBP15.54■□□□□ 0.08
SFXN1-209ENST00000508290 NUBP2Q9Y5Y2 271 aa15.54■□□□□ 0.08
SFXN1-209ENST00000508290 CCL24O00175 119 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms