RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 OR8H1Q8NGG4 311 aa16.15■□□□□ 0.18
USP53-203ENST00000507597 OR4D10Q8NGI6 311 aa16.15■□□□□ 0.18
USP53-203ENST00000507597 TSC22D3Q99576 134 aa16.15■□□□□ 0.18
USP53-203ENST00000507597 SDHCQ99643 169 aaPredicted RBP16.15■□□□□ 0.18
USP53-203ENST00000507597 RNF5Q99942 180 aa16.15■□□□□ 0.18
USP53-203ENST00000507597 C14orf166Q9Y224 244 aaKnown RBP16.15■□□□□ 0.18
USP53-203ENST00000507597 WASHC3Q9Y3C0 194 aa16.15■□□□□ 0.18
USP53-203ENST00000507597 FN1P02751 2386 aaKnown RBP16.14■□□□□ 0.17
USP53-203ENST00000507597 M0QZK8 103 aa16.14■□□□□ 0.17
USP53-203ENST00000507597 SNRNP70P08621 437 aaKnown RBP16.14■□□□□ 0.17
USP53-203ENST00000507597 TMEM11P17152 192 aa16.14■□□□□ 0.17
USP53-203ENST00000507597 DUTP33316 252 aaKnown RBP16.14■□□□□ 0.17
USP53-203ENST00000507597 IDO2Q6ZQW0 420 aa16.14■□□□□ 0.17
USP53-203ENST00000507597 KCTD9Q7L273 389 aa16.14■□□□□ 0.17
USP53-203ENST00000507597 TCTEX1D1Q8N7M0 179 aa16.14■□□□□ 0.17
USP53-203ENST00000507597 CCDC71LQ8N9Z2 235 aa16.14■□□□□ 0.17
USP53-203ENST00000507597 OR5AN1Q8NGI8 311 aa16.14■□□□□ 0.17
USP53-203ENST00000507597 OR51S1Q8NGJ8 323 aa16.14■□□□□ 0.17
USP53-203ENST00000507597 CD300LFQ8TDQ1 290 aa16.14■□□□□ 0.17
USP53-203ENST00000507597 CFHR4Q92496 578 aa16.14■□□□□ 0.17
USP53-203ENST00000507597 SLC25A21Q9BQT8 299 aaPredicted RBP16.14■□□□□ 0.17
USP53-203ENST00000507597 AIFM2Q9BRQ8 373 aa16.14■□□□□ 0.17
USP53-203ENST00000507597 RSRP1Q9BUV0 290 aa16.14■□□□□ 0.17
USP53-203ENST00000507597 SLC35D1Q9NTN3 355 aa16.14■□□□□ 0.17
USP53-203ENST00000507597 MTORP42345 2549 aa16.14■□□□□ 0.17
USP53-203ENST00000507597 IGKV1D-33P01593 117 aa16.13■□□□□ 0.17
USP53-203ENST00000507597 IGKV1-33P01594 117 aa16.13■□□□□ 0.17
USP53-203ENST00000507597 RNASE1P07998 156 aaKnown RBP16.13■□□□□ 0.17
USP53-203ENST00000507597 ZNF735P0CB33 412 aa16.13■□□□□ 0.17
USP53-203ENST00000507597 PAX6P26367 422 aa16.13■□□□□ 0.17
USP53-203ENST00000507597 GNRHRP30968 328 aa16.13■□□□□ 0.17
USP53-203ENST00000507597 UBA52P62987 128 aaKnown RBP16.13■□□□□ 0.17
USP53-203ENST00000507597 EBI3Q14213 229 aa16.13■□□□□ 0.17
USP53-203ENST00000507597 AADACL3Q5VUY0 350 aa16.13■□□□□ 0.17
USP53-203ENST00000507597 DHRS7BQ6IAN0 325 aaPredicted RBP16.13■□□□□ 0.17
USP53-203ENST00000507597 ZDHHC22Q8N966 263 aa16.13■□□□□ 0.17
USP53-203ENST00000507597 TCTEX1D2Q8WW35 142 aa16.13■□□□□ 0.17
USP53-203ENST00000507597 FXYD6Q9H0Q3 95 aa16.13■□□□□ 0.17
USP53-203ENST00000507597 TNFRSF19Q9NS68 423 aa16.13■□□□□ 0.17
USP53-203ENST00000507597 IGHV3-72A0A0B4J1Y9 119 aa16.12■□□□□ 0.17
USP53-203ENST00000507597 H0YJW9 148 aa16.12■□□□□ 0.17
USP53-203ENST00000507597 VENTXO95231 258 aa16.12■□□□□ 0.17
USP53-203ENST00000507597 LY6EQ16553 131 aa16.12■□□□□ 0.17
USP53-203ENST00000507597 FAAP20Q6NZ36 180 aa16.12■□□□□ 0.17
USP53-203ENST00000507597 MZT2BQ6NZ67 158 aa16.12■□□□□ 0.17
USP53-203ENST00000507597 ZNF818PQ6ZRF7 136 aa16.12■□□□□ 0.17
USP53-203ENST00000507597 DRAXINQ8NBI3 349 aaPredicted RBP16.12■□□□□ 0.17
USP53-203ENST00000507597 OR4C13Q8NGP0 309 aa16.12■□□□□ 0.17
USP53-203ENST00000507597 PIFOQ8TCI5 191 aa16.12■□□□□ 0.17
USP53-203ENST00000507597 FLYWCH2Q96CP2 140 aaKnown RBP16.12■□□□□ 0.17
USP53-203ENST00000507597 RBM14Q96PK6 669 aaKnown RBP16.12■□□□□ 0.17
USP53-203ENST00000507597 COPZ2Q9P299 210 aa16.12■□□□□ 0.17
USP53-203ENST00000507597 A6NDX4 124 aa16.11■□□□□ 0.17
USP53-203ENST00000507597 PROP1O75360 226 aa16.11■□□□□ 0.17
USP53-203ENST00000507597 UPK1BO75841 260 aa16.11■□□□□ 0.17
USP53-203ENST00000507597 OR2F2O95006 317 aa16.11■□□□□ 0.17
USP53-203ENST00000507597 CTSDP07339 412 aaPredicted RBP16.11■□□□□ 0.17
USP53-203ENST00000507597 DEFA1P59665 94 aa16.11■□□□□ 0.17
USP53-203ENST00000507597 DEFA3P59666 94 aa16.11■□□□□ 0.17
USP53-203ENST00000507597 EAF1Q96JC9 268 aaPredicted RBP16.11■□□□□ 0.17
USP53-203ENST00000507597 TSNAXQ99598 290 aaKnown RBP16.11■□□□□ 0.17
USP53-203ENST00000507597 CHIAQ9BZP6 476 aa16.11■□□□□ 0.17
USP53-203ENST00000507597 LIN7CQ9NUP9 197 aaKnown RBP16.11■□□□□ 0.17
USP53-203ENST00000507597 KIAA1456Q9P272 454 aa16.11■□□□□ 0.17
USP53-203ENST00000507597 LINC00854A0A1B0GVQ3 168 aa16.1■□□□□ 0.17
USP53-203ENST00000507597 B3GALNT1O75752 331 aa16.1■□□□□ 0.17
USP53-203ENST00000507597 LGALS7P47929 136 aa16.1■□□□□ 0.17
USP53-203ENST00000507597 RND3P61587 244 aa16.1■□□□□ 0.17
USP53-203ENST00000507597 RPS16P62249 146 aaKnown RBP16.1■□□□□ 0.17
USP53-203ENST00000507597 RBMS2Q15434 407 aaKnown RBP16.1■□□□□ 0.17
USP53-203ENST00000507597 ZNF383Q8NA42 475 aa16.1■□□□□ 0.17
USP53-203ENST00000507597 OR4S2Q8NH73 311 aa16.1■□□□□ 0.17
USP53-203ENST00000507597 MARCH1Q8TCQ1 289 aa16.1■□□□□ 0.17
USP53-203ENST00000507597 SLC25A33Q9BSK2 321 aa16.1■□□□□ 0.17
USP53-203ENST00000507597 NPFFR1Q9GZQ6 430 aa16.1■□□□□ 0.17
USP53-203ENST00000507597 ESM1Q9NQ30 184 aa16.1■□□□□ 0.17
USP53-203ENST00000507597 MOB4Q9Y3A3 225 aa16.1■□□□□ 0.17
USP53-203ENST00000507597 LYRM1O43325 122 aa16.09■□□□□ 0.17
USP53-203ENST00000507597 TNFSF12O43508 249 aa16.09■□□□□ 0.17
USP53-203ENST00000507597 GPR137BO60478 399 aa16.09■□□□□ 0.17
USP53-203ENST00000507597 PGLYRP1O75594 196 aaPredicted RBP16.09■□□□□ 0.17
USP53-203ENST00000507597 IGLV2-14P01704 120 aa16.09■□□□□ 0.17
USP53-203ENST00000507597 CD24P25063 80 aa16.09■□□□□ 0.17
USP53-203ENST00000507597 HNF4GQ14541 408 aa16.09■□□□□ 0.17
USP53-203ENST00000507597 PHLDA2Q53GA4 152 aa16.09■□□□□ 0.17
USP53-203ENST00000507597 GLDNQ6ZMI3 551 aaPredicted RBP16.09■□□□□ 0.17
USP53-203ENST00000507597 OR13C8Q8NGS7 320 aa16.09■□□□□ 0.17
USP53-203ENST00000507597 OSR1Q8TAX0 266 aaPredicted RBP16.09■□□□□ 0.17
USP53-203ENST00000507597 DUX5Q96PT3 197 aa16.09■□□□□ 0.17
USP53-203ENST00000507597 FAM212BQ9NTI7 297 aaPredicted RBP16.09■□□□□ 0.17
USP53-203ENST00000507597 KCNIP3Q9Y2W7 256 aa16.09■□□□□ 0.17
USP53-203ENST00000507597 SVEP1Q4LDE5 3571 aa16.09■□□□□ 0.17
USP53-203ENST00000507597 ANK3Q12955 4377 aaKnown RBP16.08■□□□□ 0.17
USP53-203ENST00000507597 PIGBOS1A0A0B4J2F0 54 aa16.08■□□□□ 0.16
USP53-203ENST00000507597 NCBP2LA6PVI3 153 aaKnown RBP16.08■□□□□ 0.16
USP53-203ENST00000507597 RBFOX2O43251 390 aaKnown RBP eCLIP16.08■□□□□ 0.16
USP53-203ENST00000507597 FGF16O43320 207 aa16.08■□□□□ 0.16
USP53-203ENST00000507597 FCGR3BO75015 233 aa16.08■□□□□ 0.16
USP53-203ENST00000507597 PIGPP57054 158 aa16.08■□□□□ 0.16
USP53-203ENST00000507597 SLC2A9Q9NRM0 540 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms