RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 UMAD1C9J7I0 102 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 M0R036 132 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 DFFBO76075 338 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 ZFPL1O95159 310 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 IGLV3-1P01715 115 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 GYPAP02724 150 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 IFNA6P05013 189 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 ZNF735P0CB33 412 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 OR5H8P0DN80 308 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 NFYBP25208 207 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 SNCAP37840 140 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 POU3F4P49335 361 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 OR2B8PP59922 312 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 FGF12P61328 243 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 PNRC1Q12796 327 aaPredicted RBP6.61□□□□□ -1.35
SCN1A-207ENST00000507401 PLA2G7Q13093 441 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 PRDX4Q13162 271 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 PDCD1Q15116 288 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 RSU1Q15404 277 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 SLC9A3R2Q15599 337 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 UBE2V2Q15819 145 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 GPR157Q5UAW9 335 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 TMEM268Q5VZI3 342 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 C1orf122Q6ZSJ8 110 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 TMED4Q7Z7H5 227 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 WDR86Q86TI4 376 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 FAM71E2Q8N5Q1 922 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 LY6G5BQ8NDX9 201 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 OR5A2Q8NGI9 324 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 SGMS2Q8NHU3 365 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 LRRC29Q8WV35 223 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 FAM71F1Q96KD3 344 aaPredicted RBP6.61□□□□□ -1.35
SCN1A-207ENST00000507401 LYZL4Q96KX0 146 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 C2orf50Q96LR7 162 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 C1orf147Q96MC9 270 aaPredicted RBP6.61□□□□□ -1.35
SCN1A-207ENST00000507401 TECTBQ96PL2 329 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 OR8B4Q96RC9 309 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 GPR61Q9BZJ8 451 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 SLC5A7Q9GZV3 580 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 ARV1Q9H2C2 271 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 HRH4Q9H3N8 390 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 CNTD2Q9H8S5 307 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 RAB22AQ9UL26 194 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 KLHDC2Q9Y2U9 406 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 FBXO7Q9Y3I1 522 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 CENPVL3A0A0U1RRI6 287 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 ZNF816-ZNF321PA0A0X1KG74 233 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 A0A1B0GV90 55 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 DNAJC9-AS1A6NH13 148 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 ZNF850A8MQ14 1090 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 PPP5D1E7EU14 171 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.6□□□□□ -1.35
SCN1A-207ENST00000507401 NDUFB3O43676 98 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 TOX4O94842 621 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 MBP02144 154 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 MRPL3P09001 348 aaKnown RBP6.6□□□□□ -1.35
SCN1A-207ENST00000507401 MMP9P14780 707 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 EGR1P18146 543 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 JOSD1Q15040 202 aaPredicted RBP6.6□□□□□ -1.35
SCN1A-207ENST00000507401 GUK1Q16774 197 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 CEACAM21Q3KPI0 293 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 SOHLH1Q5JUK2 328 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 VAX1Q5SQQ9 334 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 AKR1C8PQ5T2L2 129 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 ZNF529Q6P280 563 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 Q6YL49 198 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 SLC35E3Q7Z769 313 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 ZDHHC23Q8IYP9 409 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 TMEM86BQ8N661 226 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 ZNF676Q8N7Q3 588 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 SCCPDHQ8NBX0 429 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 OR8B12Q8NGG6 310 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 OR13C5Q8NGS8 318 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 OR4K15Q8NH41 348 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 NPRL2Q8WTW4 380 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 PIGCQ92535 297 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 RCC1LQ96I51 464 aaKnown RBP6.6□□□□□ -1.35
SCN1A-207ENST00000507401 YPEL4Q96NS1 127 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 TBX15Q96SF7 602 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 PDCD1LG2Q9BQ51 273 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 PCGF1Q9BSM1 259 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 ZNF747Q9BV97 191 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 PBOV1Q9GZY1 135 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 FAM206AQ9NX38 181 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 DOK5Q9P104 306 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 RPUSD1Q9UJJ7 312 aaKnown RBP6.6□□□□□ -1.35
SCN1A-207ENST00000507401 OR52A1Q9UKL2 312 aa6.6□□□□□ -1.35
SCN1A-207ENST00000507401 IGHV3OR15-7A0A075B7D8 119 aa6.59□□□□□ -1.35
SCN1A-207ENST00000507401 IGHV3OR16-10A0A075B7F0 116 aa6.59□□□□□ -1.35
SCN1A-207ENST00000507401 TRAV40A0A0B4J280 105 aa6.59□□□□□ -1.35
SCN1A-207ENST00000507401 A0A1W2PPH5 198 aa6.59□□□□□ -1.35
SCN1A-207ENST00000507401 OR5B21A6NL26 309 aa6.59□□□□□ -1.35
SCN1A-207ENST00000507401 OR4C45A6NMZ5 311 aa6.59□□□□□ -1.35
SCN1A-207ENST00000507401 DHRS7CA6NNS2 312 aa6.59□□□□□ -1.35
SCN1A-207ENST00000507401 A8MWP6 167 aa6.59□□□□□ -1.35
SCN1A-207ENST00000507401 M0R143 59 aa6.59□□□□□ -1.35
SCN1A-207ENST00000507401 SIGLEC5O15389 551 aa6.59□□□□□ -1.35
SCN1A-207ENST00000507401 FCN3O75636 299 aa6.59□□□□□ -1.35
SCN1A-207ENST00000507401 CHRM2P08172 466 aa6.59□□□□□ -1.35
SCN1A-207ENST00000507401 SNRNP70P08621 437 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms