RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 SLC35D1Q9NTN3 355 aa8.87□□□□□ -0.99
HMGCS1-204ENST00000507293 RDH8Q9NYR8 311 aa8.87□□□□□ -0.99
HMGCS1-204ENST00000507293 STAB2Q8WWQ8 2551 aa8.87□□□□□ -0.99
HMGCS1-204ENST00000507293 TRDCB7Z8K6 153 aa8.86□□□□□ -0.99
HMGCS1-204ENST00000507293 CALRP27797 417 aaKnown RBP8.86□□□□□ -0.99
HMGCS1-204ENST00000507293 AQP4P55087 323 aa8.86□□□□□ -0.99
HMGCS1-204ENST00000507293 SSBP2P81877 361 aaPredicted RBP8.86□□□□□ -0.99
HMGCS1-204ENST00000507293 PLA2G7Q13093 441 aa8.86□□□□□ -0.99
HMGCS1-204ENST00000507293 TRAM1Q15629 374 aa8.86□□□□□ -0.99
HMGCS1-204ENST00000507293 POC5Q8NA72 575 aa8.86□□□□□ -0.99
HMGCS1-204ENST00000507293 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.86□□□□□ -0.99
HMGCS1-204ENST00000507293 OR5T1Q8NG75 326 aa8.86□□□□□ -0.99
HMGCS1-204ENST00000507293 OR56B1Q8NGI3 324 aa8.86□□□□□ -0.99
HMGCS1-204ENST00000507293 FAM3DQ96BQ1 224 aa8.86□□□□□ -0.99
HMGCS1-204ENST00000507293 RSRP1Q9BUV0 290 aa8.86□□□□□ -0.99
HMGCS1-204ENST00000507293 ELOVL1Q9BW60 279 aa8.86□□□□□ -0.99
HMGCS1-204ENST00000507293 VCX3BQ9H321 246 aa8.86□□□□□ -0.99
HMGCS1-204ENST00000507293 TPRKBQ9Y3C4 175 aa8.86□□□□□ -0.99
HMGCS1-204ENST00000507293 TMEM272A0A1B0GTI8 110 aa8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 C13orf42A0A1B0GVH6 325 aa8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 ANKRD34BA5PLL1 514 aa8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 H3BUA1 57 aa8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 LDLRAD4O15165 306 aa8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 FABP7O15540 132 aa8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 DENRO43583 198 aaKnown RBP8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 RGS10O43665 173 aa8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 CNIH1O95406 144 aa8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 IGLV2-23P01705 113 aa8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 CD3GP09693 182 aa8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 PSMA1P25786 263 aaKnown RBP8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 SERPINB10P48595 397 aa8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 FABP5Q01469 135 aa8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 DEFA5Q01523 94 aa8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 MLLT11Q13015 90 aaPredicted RBP8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 C2orf76Q3KRA6 126 aa8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 CASC10Q5T4H9 136 aa8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 HES5Q5TA89 166 aa8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 OR4A4PQ8NGN8 299 aa8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 CCDC90BQ9GZT6 254 aa8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 OR2D2Q9H210 308 aa8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 DUSP21Q9H596 190 aa8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 ZMAT4Q9H898 229 aa8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 NKX1-2Q9UD57 310 aaPredicted RBP8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 STUB1Q9UNE7 303 aa8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 V9GY05 133 aa8.85□□□□□ -0.99
HMGCS1-204ENST00000507293 BET1O15155 118 aa8.84□□□□□ -0.99
HMGCS1-204ENST00000507293 IGLV1-51P01701 117 aa8.84□□□□□ -0.99
HMGCS1-204ENST00000507293 CRYGBP07316 175 aa8.84□□□□□ -0.99
HMGCS1-204ENST00000507293 FCGR3AP08637 254 aa8.84□□□□□ -0.99
HMGCS1-204ENST00000507293 IGHV4-30-4P0DP06 118 aa8.84□□□□□ -0.99
HMGCS1-204ENST00000507293 ZP3P21754 424 aa8.84□□□□□ -0.99
HMGCS1-204ENST00000507293 MAP2K4P45985 399 aa8.84□□□□□ -0.99
HMGCS1-204ENST00000507293 MRPS15P82914 257 aaKnown RBP8.84□□□□□ -0.99
HMGCS1-204ENST00000507293 PJVKQ0ZLH3 352 aa8.84□□□□□ -0.99
HMGCS1-204ENST00000507293 MOGAT2Q3SYC2 334 aa8.84□□□□□ -0.99
HMGCS1-204ENST00000507293 IGSF11Q5DX21 431 aa8.84□□□□□ -0.99
HMGCS1-204ENST00000507293 ANKRD13BQ86YJ7 626 aa8.84□□□□□ -0.99
HMGCS1-204ENST00000507293 RAB3CQ96E17 227 aa8.84□□□□□ -0.99
HMGCS1-204ENST00000507293 C5orf30Q96GV9 206 aa8.84□□□□□ -0.99
HMGCS1-204ENST00000507293 HARBI1Q96MB7 349 aa8.84□□□□□ -0.99
HMGCS1-204ENST00000507293 CABLES2Q9BTV7 478 aa8.84□□□□□ -0.99
HMGCS1-204ENST00000507293 RANGRFQ9HD47 186 aaPredicted RBP8.84□□□□□ -0.99
HMGCS1-204ENST00000507293 SDHAF2Q9NX18 166 aa8.84□□□□□ -0.99
HMGCS1-204ENST00000507293 KCNK7Q9Y2U2 307 aa8.84□□□□□ -0.99
HMGCS1-204ENST00000507293 A0A0G2JLM5 398 aa8.83□□□□□ -1
HMGCS1-204ENST00000507293 GSTT2P0CG29 244 aa8.83□□□□□ -1
HMGCS1-204ENST00000507293 GSTT2BP0CG30 244 aa8.83□□□□□ -1
HMGCS1-204ENST00000507293 LGALS7P47929 136 aa8.83□□□□□ -1
HMGCS1-204ENST00000507293 CBX3Q13185 183 aa8.83□□□□□ -1
HMGCS1-204ENST00000507293 Q8N1Y9 231 aa8.83□□□□□ -1
HMGCS1-204ENST00000507293 BVESQ8NE79 360 aa8.83□□□□□ -1
HMGCS1-204ENST00000507293 OR10J5Q8NHC4 309 aa8.83□□□□□ -1
HMGCS1-204ENST00000507293 NRG4Q8WWG1 115 aa8.83□□□□□ -1
HMGCS1-204ENST00000507293 MAFIPQ8WZ33 124 aa8.83□□□□□ -1
HMGCS1-204ENST00000507293 MGLLQ99685 303 aa8.83□□□□□ -1
HMGCS1-204ENST00000507293 TM2D3Q9BRN9 247 aa8.83□□□□□ -1
HMGCS1-204ENST00000507293 RAB22AQ9UL26 194 aa8.83□□□□□ -1
HMGCS1-204ENST00000507293 A0A075B6Q4 140 aa8.82□□□□□ -1
HMGCS1-204ENST00000507293 TRBV6-7A0A0A0MS04 114 aa8.82□□□□□ -1
HMGCS1-204ENST00000507293 MFNGO00587 321 aa8.82□□□□□ -1
HMGCS1-204ENST00000507293 SHOXO15266 292 aa8.82□□□□□ -1
HMGCS1-204ENST00000507293 LYL1P12980 280 aa8.82□□□□□ -1
HMGCS1-204ENST00000507293 GNB3P16520 340 aa8.82□□□□□ -1
HMGCS1-204ENST00000507293 CRHBPP24387 322 aa8.82□□□□□ -1
HMGCS1-204ENST00000507293 RANBP1P43487 201 aa8.82□□□□□ -1
HMGCS1-204ENST00000507293 SYNJ2BPP57105 145 aa8.82□□□□□ -1
HMGCS1-204ENST00000507293 OR10A3P58181 314 aa8.82□□□□□ -1
HMGCS1-204ENST00000507293 KLF5Q13887 457 aaPredicted RBP8.82□□□□□ -1
HMGCS1-204ENST00000507293 RTL8BQ17RB0 113 aa8.82□□□□□ -1
HMGCS1-204ENST00000507293 MRGPRG-AS1Q2M3A8 158 aa8.82□□□□□ -1
HMGCS1-204ENST00000507293 TMEM177Q53S58 311 aa8.82□□□□□ -1
HMGCS1-204ENST00000507293 PRSS48Q7RTY5 328 aa8.82□□□□□ -1
HMGCS1-204ENST00000507293 SGPP2Q8IWX5 399 aa8.82□□□□□ -1
HMGCS1-204ENST00000507293 OR9G4Q8NGQ1 327 aa8.82□□□□□ -1
HMGCS1-204ENST00000507293 OR10R2Q8NGX6 335 aa8.82□□□□□ -1
HMGCS1-204ENST00000507293 CITED4Q96RK1 184 aa8.82□□□□□ -1
HMGCS1-204ENST00000507293 PHB2Q99623 299 aa8.82□□□□□ -1
HMGCS1-204ENST00000507293 TINAGL1Q9GZM7 467 aaPredicted RBP8.82□□□□□ -1
HMGCS1-204ENST00000507293 PALMDQ9NP74 551 aa8.82□□□□□ -1
HMGCS1-204ENST00000507293 ACOT13Q9NPJ3 140 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 251.3 ms