RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 MC5RP33032 325 aa14.39□□□□□ -0.11
NPHP4-210ENST00000506941 DUTP33316 252 aaKnown RBP14.39□□□□□ -0.11
NPHP4-210ENST00000506941 RCVRNP35243 200 aa14.39□□□□□ -0.11
NPHP4-210ENST00000506941 HRH1P35367 487 aa14.39□□□□□ -0.11
NPHP4-210ENST00000506941 TAS2R46P59540 309 aa14.39□□□□□ -0.11
NPHP4-210ENST00000506941 DGCR2P98153 550 aa14.39□□□□□ -0.11
NPHP4-210ENST00000506941 DYRK1AQ13627 763 aa14.39□□□□□ -0.11
NPHP4-210ENST00000506941 OR5H2Q8NGV7 314 aa14.39□□□□□ -0.11
NPHP4-210ENST00000506941 GIMAP1Q8WWP7 306 aa14.39□□□□□ -0.11
NPHP4-210ENST00000506941 DDB2Q92466 427 aa14.39□□□□□ -0.11
NPHP4-210ENST00000506941 LIN7CQ9NUP9 197 aaKnown RBP14.39□□□□□ -0.11
NPHP4-210ENST00000506941 KLK11Q9UBX7 282 aa14.39□□□□□ -0.11
NPHP4-210ENST00000506941 LINC01548A6NM66 108 aa14.38□□□□□ -0.11
NPHP4-210ENST00000506941 NBR2O15453 112 aa14.38□□□□□ -0.11
NPHP4-210ENST00000506941 NDUFA3O95167 84 aa14.38□□□□□ -0.11
NPHP4-210ENST00000506941 IGHG2P01859 326 aa14.38□□□□□ -0.11
NPHP4-210ENST00000506941 APOA2P02652 100 aa14.38□□□□□ -0.11
NPHP4-210ENST00000506941 TNFSF8P32971 234 aa14.38□□□□□ -0.11
NPHP4-210ENST00000506941 THBS3P49746 956 aa14.38□□□□□ -0.11
NPHP4-210ENST00000506941 EIF4EBP1Q13541 118 aaPredicted RBP14.38□□□□□ -0.11
NPHP4-210ENST00000506941 NPBQ8NG41 125 aa14.38□□□□□ -0.11
NPHP4-210ENST00000506941 SECTM1Q8WVN6 248 aa14.38□□□□□ -0.11
NPHP4-210ENST00000506941 HSPB9Q9BQS6 159 aa14.38□□□□□ -0.11
NPHP4-210ENST00000506941 SLC35D1Q9NTN3 355 aa14.38□□□□□ -0.11
NPHP4-210ENST00000506941 RBMX2Q9Y388 322 aaKnown RBP14.38□□□□□ -0.11
NPHP4-210ENST00000506941 TNCP24821 2201 aa14.37□□□□□ -0.11
NPHP4-210ENST00000506941 FXYD4P59646 89 aa14.37□□□□□ -0.11
NPHP4-210ENST00000506941 DHRS11Q6UWP2 260 aa14.37□□□□□ -0.11
NPHP4-210ENST00000506941 PDPNQ86YL7 162 aa14.37□□□□□ -0.11
NPHP4-210ENST00000506941 GPHA2Q96T91 129 aa14.37□□□□□ -0.11
NPHP4-210ENST00000506941 RASL11BQ9BPW5 248 aa14.37□□□□□ -0.11
NPHP4-210ENST00000506941 CCL28Q9NRJ3 127 aa14.37□□□□□ -0.11
NPHP4-210ENST00000506941 MTFP1Q9UDX5 166 aa14.37□□□□□ -0.11
NPHP4-210ENST00000506941 ZNF107Q9UII5 783 aaPredicted RBP14.37□□□□□ -0.11
NPHP4-210ENST00000506941 GABARAPH6UMI1 98 aa14.36□□□□□ -0.11
NPHP4-210ENST00000506941 PEX14O75381 377 aa14.36□□□□□ -0.11
NPHP4-210ENST00000506941 RBBP9O75884 186 aa14.36□□□□□ -0.11
NPHP4-210ENST00000506941 SLC22A5O76082 557 aa14.36□□□□□ -0.11
NPHP4-210ENST00000506941 RPL30P62888 115 aaKnown RBP14.36□□□□□ -0.11
NPHP4-210ENST00000506941 IL18Q14116 193 aa14.36□□□□□ -0.11
NPHP4-210ENST00000506941 C5orf64Q2M2E5 130 aa14.36□□□□□ -0.11
NPHP4-210ENST00000506941 C10orf99Q6UWK7 81 aa14.36□□□□□ -0.11
NPHP4-210ENST00000506941 SLC35E3Q7Z769 313 aa14.36□□□□□ -0.11
NPHP4-210ENST00000506941 TMEM17Q86X19 198 aa14.36□□□□□ -0.11
NPHP4-210ENST00000506941 C11orf44Q8N8P7 122 aa14.36□□□□□ -0.11
NPHP4-210ENST00000506941 BVESQ8NE79 360 aa14.36□□□□□ -0.11
NPHP4-210ENST00000506941 C15orf40Q8WUR7 153 aa14.36□□□□□ -0.11
NPHP4-210ENST00000506941 FCAMRQ8WWV6 532 aa14.36□□□□□ -0.11
NPHP4-210ENST00000506941 ADTRPQ96IZ2 230 aa14.36□□□□□ -0.11
NPHP4-210ENST00000506941 NOL4LQ96MY1 436 aaPredicted RBP14.36□□□□□ -0.11
NPHP4-210ENST00000506941 SOSTQ9BQB4 213 aa14.36□□□□□ -0.11
NPHP4-210ENST00000506941 ZNF2Q9BSG1 426 aaPredicted RBP14.36□□□□□ -0.11
NPHP4-210ENST00000506941 SLC5A7Q9GZV3 580 aa14.36□□□□□ -0.11
NPHP4-210ENST00000506941 MMP27Q9H306 513 aa14.36□□□□□ -0.11
NPHP4-210ENST00000506941 WNK1Q9H4A3 2382 aa14.36□□□□□ -0.11
NPHP4-210ENST00000506941 M0QYG6 137 aa14.35□□□□□ -0.11
NPHP4-210ENST00000506941 HERV-K104P61576 105 aa14.35□□□□□ -0.11
NPHP4-210ENST00000506941 PYHIN1Q6K0P9 492 aa14.35□□□□□ -0.11
NPHP4-210ENST00000506941 SMIM4Q8WVI0 70 aa14.35□□□□□ -0.11
NPHP4-210ENST00000506941 MOB3AQ96BX8 217 aa14.35□□□□□ -0.11
NPHP4-210ENST00000506941 DGCR14Q96DF8 476 aaKnown RBP14.35□□□□□ -0.11
NPHP4-210ENST00000506941 RNF5Q99942 180 aa14.35□□□□□ -0.11
NPHP4-210ENST00000506941 FXYD6Q9H0Q3 95 aa14.35□□□□□ -0.11
NPHP4-210ENST00000506941 FBXL15Q9H469 300 aa14.35□□□□□ -0.11
NPHP4-210ENST00000506941 LINC00527Q9UJ94 153 aa14.35□□□□□ -0.11
NPHP4-210ENST00000506941 A3GALT2U3KPV4 340 aa14.35□□□□□ -0.11
NPHP4-210ENST00000506941 RRHO14718 337 aa14.34□□□□□ -0.11
NPHP4-210ENST00000506941 CTDSPLO15194 276 aa14.34□□□□□ -0.11
NPHP4-210ENST00000506941 IGLV2-23P01705 113 aa14.34□□□□□ -0.11
NPHP4-210ENST00000506941 HLA-DRB1P01911 266 aa14.34□□□□□ -0.11
NPHP4-210ENST00000506941 CD28P10747 220 aa14.34□□□□□ -0.11
NPHP4-210ENST00000506941 RPS16P62249 146 aaKnown RBP14.34□□□□□ -0.11
NPHP4-210ENST00000506941 TAGLNQ01995 201 aaKnown RBP14.34□□□□□ -0.11
NPHP4-210ENST00000506941 PSG5Q15238 335 aa14.34□□□□□ -0.11
NPHP4-210ENST00000506941 MSMO1Q15800 293 aa14.34□□□□□ -0.11
NPHP4-210ENST00000506941 ZNF818PQ6ZRF7 136 aa14.34□□□□□ -0.11
NPHP4-210ENST00000506941 KCTD9Q7L273 389 aa14.34□□□□□ -0.11
NPHP4-210ENST00000506941 FLYWCH2Q96CP2 140 aaKnown RBP14.34□□□□□ -0.11
NPHP4-210ENST00000506941 TPSG1Q9NRR2 321 aa14.34□□□□□ -0.11
NPHP4-210ENST00000506941 TAS2R8Q9NYW2 309 aa14.34□□□□□ -0.11
NPHP4-210ENST00000506941 NDUFA13Q9P0J0 144 aa14.34□□□□□ -0.11
NPHP4-210ENST00000506941 KIAA1456Q9P272 454 aa14.34□□□□□ -0.11
NPHP4-210ENST00000506941 TNFSF12O43508 249 aa14.33□□□□□ -0.12
NPHP4-210ENST00000506941 CD3DP04234 171 aa14.33□□□□□ -0.12
NPHP4-210ENST00000506941 BRWD1-AS2P59051 145 aa14.33□□□□□ -0.12
NPHP4-210ENST00000506941 MRPS10P82664 201 aaKnown RBP14.33□□□□□ -0.12
NPHP4-210ENST00000506941 RTL8BQ17RB0 113 aa14.33□□□□□ -0.12
NPHP4-210ENST00000506941 TMEM177Q53S58 311 aa14.33□□□□□ -0.12
NPHP4-210ENST00000506941 OR2B11Q5JQS5 317 aa14.33□□□□□ -0.12
NPHP4-210ENST00000506941 VAX1Q5SQQ9 334 aa14.33□□□□□ -0.12
NPHP4-210ENST00000506941 OR5AU1Q8NGC0 362 aa14.33□□□□□ -0.12
NPHP4-210ENST00000506941 TSNAXQ99598 290 aaKnown RBP14.33□□□□□ -0.12
NPHP4-210ENST00000506941 HSD17B10Q99714 261 aaKnown RBP14.33□□□□□ -0.12
NPHP4-210ENST00000506941 TINAGL1Q9GZM7 467 aaPredicted RBP14.33□□□□□ -0.12
NPHP4-210ENST00000506941 RABL2AQ9UBK7 228 aaPredicted RBP14.33□□□□□ -0.12
NPHP4-210ENST00000506941 RABL2BQ9UNT1 228 aa14.33□□□□□ -0.12
NPHP4-210ENST00000506941 IGHV7-81A0A0B4J1V7 117 aa14.32□□□□□ -0.12
NPHP4-210ENST00000506941 FABP12A6NFH5 140 aa14.32□□□□□ -0.12
NPHP4-210ENST00000506941 SRRM4A7MD48 611 aaKnown RBP14.32□□□□□ -0.12
NPHP4-210ENST00000506941 FCN1O00602 326 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms