RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 XRCC4Q13426 336 aa0.6□□□□□ -2.31
CDC42SE2-210ENST00000506929 NNATQ16517 81 aa0.6□□□□□ -2.31
CDC42SE2-210ENST00000506929 SLC36A2Q495M3 483 aa0.6□□□□□ -2.31
CDC42SE2-210ENST00000506929 HSP90B2PQ58FF3 399 aa0.6□□□□□ -2.31
CDC42SE2-210ENST00000506929 PABPC1L2AQ5JQF8 200 aa0.6□□□□□ -2.31
CDC42SE2-210ENST00000506929 OR51H1Q8NH63 302 aa0.6□□□□□ -2.31
CDC42SE2-210ENST00000506929 LHFPL5Q8TAF8 219 aa0.6□□□□□ -2.31
CDC42SE2-210ENST00000506929 SMCR5Q8TEV8 140 aa0.6□□□□□ -2.31
CDC42SE2-210ENST00000506929 SFRP2Q96HF1 295 aa0.6□□□□□ -2.31
CDC42SE2-210ENST00000506929 NMNAT3Q96T66 252 aa0.6□□□□□ -2.31
CDC42SE2-210ENST00000506929 TMEM94Q12767 1356 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 MUC5ACP98088 5654 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 LOC100506127A0A0U1RQW1 187 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 F5H5K5 113 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 SMLR1H3BR10 107 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 GSTZ1O43708 216 aaPredicted RBP0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 UGT2B11O75310 529 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 PSMG1O95456 288 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 FADS2O95864 444 aaKnown RBP0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 HBZP02008 142 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 IVLP07476 585 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 AGTR1P30556 359 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 CA7P43166 264 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 AQP4P55087 323 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 RELAQ04206 551 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 SMAGPQ0VAQ4 97 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 C4orf26Q17RF5 130 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 Q3ZCU0 254 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 SAPCD1Q5SSQ6 148 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 OR10K2Q6IF99 312 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 LCN8Q6JVE9 175 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 COPS6Q7L5N1 327 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 BAP18Q8IXM2 172 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 BOD1L2Q8IYS8 172 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 LRRC34Q8IZ02 419 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 RIBC1Q8N443 379 aaPredicted RBP0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 CCDC12Q8WUD4 166 aaPredicted RBP0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 CCDC124Q96CT7 223 aaKnown RBP0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 CYTH2Q99418 400 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 TMEM208Q9BTX3 173 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 UGT2B28Q9BY64 529 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 ASCL3Q9NQ33 180 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 BABAM2Q9NXR7 383 aa0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 POLR3HQ9Y535 204 aaPredicted RBP0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 RBM7Q9Y580 266 aaKnown RBP0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 V9GYY5 206 aaPredicted RBP0.59□□□□□ -2.31
CDC42SE2-210ENST00000506929 USP24Q9UPU5 2620 aa0.59□□□□□ -2.32
CDC42SE2-210ENST00000506929 TTC28Q96AY4 2481 aa0.59□□□□□ -2.32
CDC42SE2-210ENST00000506929 NPATQ14207 1427 aa0.58□□□□□ -2.32
CDC42SE2-210ENST00000506929 SYNGR1O43759 233 aa0.58□□□□□ -2.32
CDC42SE2-210ENST00000506929 ATP5G1P05496 136 aa0.58□□□□□ -2.32
CDC42SE2-210ENST00000506929 CXCL2P19875 107 aa0.58□□□□□ -2.32
CDC42SE2-210ENST00000506929 GLO1Q04760 184 aa0.58□□□□□ -2.32
CDC42SE2-210ENST00000506929 UNQ6190/PRO20217Q6UXQ8 127 aa0.58□□□□□ -2.32
CDC42SE2-210ENST00000506929 SCGB1D4Q6XE38 83 aa0.58□□□□□ -2.32
CDC42SE2-210ENST00000506929 FP248Q71RG6 208 aaPredicted RBP0.58□□□□□ -2.32
CDC42SE2-210ENST00000506929 NKX6-2Q9C056 277 aaPredicted RBP0.58□□□□□ -2.32
CDC42SE2-210ENST00000506929 MS4A12Q9NXJ0 267 aa0.58□□□□□ -2.32
CDC42SE2-210ENST00000506929 KLK5Q9Y337 293 aaPredicted RBP0.58□□□□□ -2.32
CDC42SE2-210ENST00000506929 DIDO1Q9BTC0 2240 aaKnown RBP0.58□□□□□ -2.32
CDC42SE2-210ENST00000506929 KIAA1109Q2LD37 5005 aa0.58□□□□□ -2.32
CDC42SE2-210ENST00000506929 POLEQ07864 2286 aa0.58□□□□□ -2.32
CDC42SE2-210ENST00000506929 IGKV3D-7A0A0C4DH55 119 aa0.57□□□□□ -2.32
CDC42SE2-210ENST00000506929 IGKV3OR2-268A0A0C4DH90 116 aa0.57□□□□□ -2.32
CDC42SE2-210ENST00000506929 METTL15A6NJ78 407 aa0.57□□□□□ -2.32
CDC42SE2-210ENST00000506929 TXNDC9O14530 226 aa0.57□□□□□ -2.32
CDC42SE2-210ENST00000506929 CIAO1O76071 339 aa0.57□□□□□ -2.32
CDC42SE2-210ENST00000506929 CRPP02741 224 aa0.57□□□□□ -2.32
CDC42SE2-210ENST00000506929 PRB4P10163 310 aaPredicted RBP0.57□□□□□ -2.32
CDC42SE2-210ENST00000506929 CXCL3P19876 107 aa0.57□□□□□ -2.32
CDC42SE2-210ENST00000506929 PVALBP20472 110 aaPredicted RBP0.57□□□□□ -2.32
CDC42SE2-210ENST00000506929 CD24P25063 80 aa0.57□□□□□ -2.32
CDC42SE2-210ENST00000506929 RBM11P57052 281 aaKnown RBP0.57□□□□□ -2.32
CDC42SE2-210ENST00000506929 MOGQ16653 247 aa0.57□□□□□ -2.32
CDC42SE2-210ENST00000506929 RBM48Q5RL73 367 aaKnown RBP0.57□□□□□ -2.32
CDC42SE2-210ENST00000506929 NATD1Q8N6N6 113 aa0.57□□□□□ -2.32
CDC42SE2-210ENST00000506929 OR2D3Q8NGH3 330 aa0.57□□□□□ -2.32
CDC42SE2-210ENST00000506929 OR1L8Q8NGR8 309 aa0.57□□□□□ -2.32
CDC42SE2-210ENST00000506929 PPCDCQ96CD2 204 aa0.57□□□□□ -2.32
CDC42SE2-210ENST00000506929 OR7D2Q96RA2 312 aa0.57□□□□□ -2.32
CDC42SE2-210ENST00000506929 CYSTM1Q9H1C7 97 aa0.57□□□□□ -2.32
CDC42SE2-210ENST00000506929 TAAR3PQ9P1P4 343 aa0.57□□□□□ -2.32
CDC42SE2-210ENST00000506929 SOX21Q9Y651 276 aaPredicted RBP0.57□□□□□ -2.32
CDC42SE2-210ENST00000506929 GREB1Q4ZG55 1949 aa0.57□□□□□ -2.32
CDC42SE2-210ENST00000506929 MDN1Q9NU22 5596 aa0.57□□□□□ -2.32
CDC42SE2-210ENST00000506929 MICAL3Q7RTP6 2002 aa0.56□□□□□ -2.32
CDC42SE2-210ENST00000506929 IGHV3-64A0A075B6Q5 118 aa0.56□□□□□ -2.32
CDC42SE2-210ENST00000506929 LINC00854A0A1B0GVQ3 168 aa0.56□□□□□ -2.32
CDC42SE2-210ENST00000506929 APOA1P02647 267 aa0.56□□□□□ -2.32
CDC42SE2-210ENST00000506929 IFNGR2P38484 337 aa0.56□□□□□ -2.32
CDC42SE2-210ENST00000506929 GABRA2P47869 451 aa0.56□□□□□ -2.32
CDC42SE2-210ENST00000506929 DAD1P61803 113 aa0.56□□□□□ -2.32
CDC42SE2-210ENST00000506929 HPCAP84074 193 aa0.56□□□□□ -2.32
CDC42SE2-210ENST00000506929 HOXC5Q00444 222 aa0.56□□□□□ -2.32
CDC42SE2-210ENST00000506929 CDK5R1Q15078 307 aa0.56□□□□□ -2.32
CDC42SE2-210ENST00000506929 SURF2Q15527 256 aaPredicted RBP0.56□□□□□ -2.32
CDC42SE2-210ENST00000506929 ZNHIT3Q15649 155 aaPredicted RBP0.56□□□□□ -2.32
CDC42SE2-210ENST00000506929 FBXO48Q5FWF7 155 aa0.56□□□□□ -2.32
CDC42SE2-210ENST00000506929 KTN1-AS1Q86SY8 53 aa0.56□□□□□ -2.32
CDC42SE2-210ENST00000506929 ZNF75CPQ92670 426 aaPredicted RBP0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms