RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 OR1A1Q9P1Q5 309 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 KIAA1456Q9P272 454 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 V9GYH0 126 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 IGHV3OR16-10A0A075B7F0 116 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 IGKV1D-8A0A087WSZ0 117 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 H0YJW9 148 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 GPR31O00270 319 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 RAB3DO95716 219 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 HRASP01112 189 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 IGHV4-59P01825 116 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 OR8U9P0C7N5 309 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 TMEM11P17152 192 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 SLC6A1P30531 599 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 DUTP33316 252 aaKnown RBP6.78□□□□□ -1.32
PDGFC-205ENST00000506880 RFX2P48378 723 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 UBE2MP61081 183 aaKnown RBP6.78□□□□□ -1.32
PDGFC-205ENST00000506880 POU2AF1Q16633 256 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 TMEM177Q53S58 311 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 FOXB2Q5VYV0 432 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 THOC7Q6I9Y2 204 aaKnown RBP6.78□□□□□ -1.32
PDGFC-205ENST00000506880 MOB3BQ86TA1 216 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 PDZD9Q8IXQ8 264 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 TOMM5Q8N4H5 51 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 DRAM1Q8N682 238 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 GVQW1Q8N7I0 195 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 CCDC71LQ8N9Z2 235 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 TEX45Q8NA69 505 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 OR8U1Q8NH10 309 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 OR4S2Q8NH73 311 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 OR4A5Q8NH83 315 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 OR2T6Q8NHC8 308 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 DDB2Q92466 427 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 FLYWCH2Q96CP2 140 aaKnown RBP6.78□□□□□ -1.32
PDGFC-205ENST00000506880 SLC25A33Q9BSK2 321 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 THAP7Q9BT49 309 aaPredicted RBP6.78□□□□□ -1.32
PDGFC-205ENST00000506880 SDHAF2Q9NX18 166 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 COMMD9Q9P000 198 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 COPZ2Q9P299 210 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 KLK11Q9UBX7 282 aa6.78□□□□□ -1.32
PDGFC-205ENST00000506880 ELF5Q9UKW6 265 aaPredicted RBP6.78□□□□□ -1.32
PDGFC-205ENST00000506880 CLPSL1A2RUU4 121 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 FAM181BA6NEQ2 426 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 SLC31A2O15432 143 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 HLA-DRB1P01911 266 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 SNRNP70P08621 437 aaKnown RBP6.77□□□□□ -1.33
PDGFC-205ENST00000506880 CT45A6P0DMU7 189 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 CT45A5P0DMU8 189 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 CT45A7P0DMV0 189 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 MAS1LP35410 378 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 INPP1P49441 399 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 CRIP2P52943 208 aaPredicted RBP6.77□□□□□ -1.33
PDGFC-205ENST00000506880 PPP5CP53041 499 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 DGCR2P98153 550 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 EIF4EBP1Q13541 118 aaPredicted RBP6.77□□□□□ -1.33
PDGFC-205ENST00000506880 ZNF79Q15937 498 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 PYDC2Q56P42 97 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 FAM209BQ5JX69 171 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 TRIQKQ629K1 86 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 FAM71E2Q8N5Q1 922 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 OR56B4Q8NH76 319 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 CHPT1Q8WUD6 406 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 C22orf15Q8WYQ4 148 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 LEAP2Q969E1 77 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 TRIM63Q969Q1 353 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 EAF1Q96JC9 268 aaPredicted RBP6.77□□□□□ -1.33
PDGFC-205ENST00000506880 SRSF8Q9BRL6 282 aaKnown RBP6.77□□□□□ -1.33
PDGFC-205ENST00000506880 ZNF2Q9BSG1 426 aaPredicted RBP6.77□□□□□ -1.33
PDGFC-205ENST00000506880 RSRP1Q9BUV0 290 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 SRRQ9GZT4 340 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 SLC5A7Q9GZV3 580 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 PLEKHA2Q9HB19 425 aa6.77□□□□□ -1.33
PDGFC-205ENST00000506880 STAB1Q9NY15 2570 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 A0A1W2PRD5 423 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 A0A1W2PRF3 423 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 A0A1W2PRM7 423 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 MEX3AA1L020 520 aaKnown RBP6.76□□□□□ -1.33
PDGFC-205ENST00000506880 M0R1X1 148 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 NBR2O15453 112 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 BRI3O95415 125 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 HPRT1P00492 218 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 IGKV1D-33P01593 117 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 IGKV1-33P01594 117 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 IGHG2P01859 326 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 CD3DP04234 171 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 CTSDP07339 412 aaPredicted RBP6.76□□□□□ -1.33
PDGFC-205ENST00000506880 AADACP22760 399 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 NFYAP23511 347 aaPredicted RBP6.76□□□□□ -1.33
PDGFC-205ENST00000506880 F2RP25116 425 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 HLA-DMAP28067 261 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 GNRHRP30968 328 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 RAG2P55895 527 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 TAS2R31P59538 309 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 SRPXP78539 464 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 HES1Q14469 280 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 ZNF846Q147U1 533 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 VMA21Q3ZAQ7 101 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 FOXRED2Q8IWF2 684 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 DYNAPQ8N1N2 210 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 C5orf56Q8N8D9 126 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 C17orf50Q8WW18 174 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms