RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 TCRBV4S1A1TA0A5B7 111 aa10.34□□□□□ -0.75
TCOF1-209ENST00000506630 AP4M1O00189 453 aa10.34□□□□□ -0.75
TCOF1-209ENST00000506630 RBBP9O75884 186 aa10.34□□□□□ -0.75
TCOF1-209ENST00000506630 ELK1P19419 428 aa10.34□□□□□ -0.75
TCOF1-209ENST00000506630 PLGLAQ15195 96 aa10.34□□□□□ -0.75
TCOF1-209ENST00000506630 C5orf64Q2M2E5 130 aa10.34□□□□□ -0.75
TCOF1-209ENST00000506630 ZNF329Q86UD4 541 aa10.34□□□□□ -0.75
TCOF1-209ENST00000506630 PDPNQ86YL7 162 aa10.34□□□□□ -0.75
TCOF1-209ENST00000506630 STPG2Q8N412 459 aa10.34□□□□□ -0.75
TCOF1-209ENST00000506630 NPBQ8NG41 125 aa10.34□□□□□ -0.75
TCOF1-209ENST00000506630 SNAPC3Q92966 411 aa10.34□□□□□ -0.75
TCOF1-209ENST00000506630 NECAP2Q9NVZ3 263 aa10.34□□□□□ -0.75
TCOF1-209ENST00000506630 ZNF107Q9UII5 783 aaPredicted RBP10.34□□□□□ -0.75
TCOF1-209ENST00000506630 SCOCQ9UIL1 159 aa10.34□□□□□ -0.75
TCOF1-209ENST00000506630 GAB2Q9UQC2 676 aa10.34□□□□□ -0.75
TCOF1-209ENST00000506630 MRPS7Q9Y2R9 242 aaKnown RBP10.34□□□□□ -0.75
TCOF1-209ENST00000506630 IGKV1D-13A0A0B4J2D9 117 aa10.33□□□□□ -0.76
TCOF1-209ENST00000506630 NDUFA3O95167 84 aa10.33□□□□□ -0.76
TCOF1-209ENST00000506630 HLA-DQB1P01920 261 aa10.33□□□□□ -0.76
TCOF1-209ENST00000506630 IGKV1-16P04430 117 aa10.33□□□□□ -0.76
TCOF1-209ENST00000506630 IGKV1-13P0DP09 117 aa10.33□□□□□ -0.76
TCOF1-209ENST00000506630 PRSS3P35030 304 aa10.33□□□□□ -0.76
TCOF1-209ENST00000506630 THBS3P49746 956 aa10.33□□□□□ -0.76
TCOF1-209ENST00000506630 TMBIM6P55061 237 aa10.33□□□□□ -0.76
TCOF1-209ENST00000506630 RPS16P62249 146 aaKnown RBP10.33□□□□□ -0.76
TCOF1-209ENST00000506630 SLC35B1P78383 322 aa10.33□□□□□ -0.76
TCOF1-209ENST00000506630 CBX3Q13185 183 aa10.33□□□□□ -0.76
TCOF1-209ENST00000506630 VAX1Q5SQQ9 334 aa10.33□□□□□ -0.76
TCOF1-209ENST00000506630 NDUFA11Q86Y39 141 aa10.33□□□□□ -0.76
TCOF1-209ENST00000506630 SNX29P2Q8IUI4 249 aa10.33□□□□□ -0.76
TCOF1-209ENST00000506630 ZNF645Q8N7E2 425 aa10.33□□□□□ -0.76
TCOF1-209ENST00000506630 BCL7BQ9BQE9 202 aa10.33□□□□□ -0.76
TCOF1-209ENST00000506630 FBXL15Q9H469 300 aa10.33□□□□□ -0.76
TCOF1-209ENST00000506630 TNCP24821 2201 aa10.33□□□□□ -0.76
TCOF1-209ENST00000506630 RRHO14718 337 aa10.32□□□□□ -0.76
TCOF1-209ENST00000506630 HLA-DRB1P01911 266 aa10.32□□□□□ -0.76
TCOF1-209ENST00000506630 AADACP22760 399 aa10.32□□□□□ -0.76
TCOF1-209ENST00000506630 FCGR2CP31995 323 aa10.32□□□□□ -0.76
TCOF1-209ENST00000506630 DUTP33316 252 aaKnown RBP10.32□□□□□ -0.76
TCOF1-209ENST00000506630 CD83Q01151 205 aa10.32□□□□□ -0.76
TCOF1-209ENST00000506630 CDK10Q15131 360 aa10.32□□□□□ -0.76
TCOF1-209ENST00000506630 RTL8BQ17RB0 113 aa10.32□□□□□ -0.76
TCOF1-209ENST00000506630 LIN54Q6MZP7 749 aa10.32□□□□□ -0.76
TCOF1-209ENST00000506630 BVESQ8NE79 360 aa10.32□□□□□ -0.76
TCOF1-209ENST00000506630 OR5AP2Q8NGF4 316 aa10.32□□□□□ -0.76
TCOF1-209ENST00000506630 FLYWCH2Q96CP2 140 aaKnown RBP10.32□□□□□ -0.76
TCOF1-209ENST00000506630 ADTRPQ96IZ2 230 aa10.32□□□□□ -0.76
TCOF1-209ENST00000506630 HARBI1Q96MB7 349 aa10.32□□□□□ -0.76
TCOF1-209ENST00000506630 TSNAXQ99598 290 aaKnown RBP10.32□□□□□ -0.76
TCOF1-209ENST00000506630 PARP11Q9NR21 331 aa10.32□□□□□ -0.76
TCOF1-209ENST00000506630 EHFQ9NZC4 300 aa10.32□□□□□ -0.76
TCOF1-209ENST00000506630 EXTL2Q9UBQ6 330 aa10.32□□□□□ -0.76
TCOF1-209ENST00000506630 TSSC4Q9Y5U2 329 aaPredicted RBP10.32□□□□□ -0.76
TCOF1-209ENST00000506630 IGHV7-81A0A0B4J1V7 117 aa10.31□□□□□ -0.76
TCOF1-209ENST00000506630 LINC00473A8K010 186 aa10.31□□□□□ -0.76
TCOF1-209ENST00000506630 ADARB2-AS1A8MUL3 147 aa10.31□□□□□ -0.76
TCOF1-209ENST00000506630 ATP6V0E1O15342 81 aa10.31□□□□□ -0.76
TCOF1-209ENST00000506630 RGS5O15539 181 aa10.31□□□□□ -0.76
TCOF1-209ENST00000506630 TUSC2O75896 110 aa10.31□□□□□ -0.76
TCOF1-209ENST00000506630 SLC22A5O76082 557 aa10.31□□□□□ -0.76
TCOF1-209ENST00000506630 PPYP01298 95 aa10.31□□□□□ -0.76
TCOF1-209ENST00000506630 OR5H8P0DN80 308 aa10.31□□□□□ -0.76
TCOF1-209ENST00000506630 VDAC1P21796 283 aa10.31□□□□□ -0.76
TCOF1-209ENST00000506630 FXYD4P59646 89 aa10.31□□□□□ -0.76
TCOF1-209ENST00000506630 OXLD1Q5BKU9 147 aa10.31□□□□□ -0.76
TCOF1-209ENST00000506630 RNASE12Q5GAN4 147 aaKnown RBP10.31□□□□□ -0.76
TCOF1-209ENST00000506630 TCTEX1D4Q5JR98 221 aa10.31□□□□□ -0.76
TCOF1-209ENST00000506630 KCTD9Q7L273 389 aa10.31□□□□□ -0.76
TCOF1-209ENST00000506630 OR5H2Q8NGV7 314 aa10.31□□□□□ -0.76
TCOF1-209ENST00000506630 ABHD5Q8WTS1 349 aa10.31□□□□□ -0.76
TCOF1-209ENST00000506630 SECTM1Q8WVN6 248 aa10.31□□□□□ -0.76
TCOF1-209ENST00000506630 ISOC1Q96CN7 298 aa10.31□□□□□ -0.76
TCOF1-209ENST00000506630 R3HDM4Q96D70 268 aa10.31□□□□□ -0.76
TCOF1-209ENST00000506630 RNF5Q99942 180 aa10.31□□□□□ -0.76
TCOF1-209ENST00000506630 GON7Q9BXV9 100 aa10.31□□□□□ -0.76
TCOF1-209ENST00000506630 METTL1Q9UBP6 276 aaKnown RBP10.31□□□□□ -0.76
TCOF1-209ENST00000506630 ANAPC10Q9UM13 185 aa10.31□□□□□ -0.76
TCOF1-209ENST00000506630 RBMX2Q9Y388 322 aaKnown RBP10.31□□□□□ -0.76
TCOF1-209ENST00000506630 CCDC160A6NGH7 325 aa10.3□□□□□ -0.76
TCOF1-209ENST00000506630 H3BMQ9 156 aa10.3□□□□□ -0.76
TCOF1-209ENST00000506630 SHOXO15266 292 aa10.3□□□□□ -0.76
TCOF1-209ENST00000506630 SLC25A17O43808 307 aa10.3□□□□□ -0.76
TCOF1-209ENST00000506630 SPDEFO95238 335 aa10.3□□□□□ -0.76
TCOF1-209ENST00000506630 PMP2P02689 132 aa10.3□□□□□ -0.76
TCOF1-209ENST00000506630 RRASP10301 218 aa10.3□□□□□ -0.76
TCOF1-209ENST00000506630 PF4V1P10720 104 aa10.3□□□□□ -0.76
TCOF1-209ENST00000506630 TAS2R46P59540 309 aa10.3□□□□□ -0.76
TCOF1-209ENST00000506630 HERV-K104P61576 105 aa10.3□□□□□ -0.76
TCOF1-209ENST00000506630 TAGLNQ01995 201 aaKnown RBP10.3□□□□□ -0.76
TCOF1-209ENST00000506630 PSG5Q15238 335 aa10.3□□□□□ -0.76
TCOF1-209ENST00000506630 OR4F17Q8NGA8 305 aa10.3□□□□□ -0.76
TCOF1-209ENST00000506630 DYNC2LI1Q8TCX1 351 aa10.3□□□□□ -0.76
TCOF1-209ENST00000506630 GPX8Q8TED1 209 aa10.3□□□□□ -0.76
TCOF1-209ENST00000506630 OR4F4Q96R69 305 aa10.3□□□□□ -0.76
TCOF1-209ENST00000506630 CLCC1Q96S66 551 aa10.3□□□□□ -0.76
TCOF1-209ENST00000506630 OR51J1Q9H342 316 aa10.3□□□□□ -0.76
TCOF1-209ENST00000506630 SCPEP1Q9HB40 452 aa10.3□□□□□ -0.76
TCOF1-209ENST00000506630 CCDC59Q9P031 241 aaKnown RBP10.3□□□□□ -0.76
TCOF1-209ENST00000506630 DNAH3Q8TD57 4116 aa10.29□□□□□ -0.76
TCOF1-209ENST00000506630 CRYZL1O95825 349 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms