RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 SPIN4Q56A73 249 aa3.41□□□□□ -1.86
HERC4-213ENST00000506515 C3orf33Q6P1S2 294 aa3.41□□□□□ -1.86
HERC4-213ENST00000506515 TMPPEQ6ZT21 453 aa3.41□□□□□ -1.86
HERC4-213ENST00000506515 MARCH3Q86UD3 253 aa3.41□□□□□ -1.86
HERC4-213ENST00000506515 LINC00477Q96M19 166 aa3.41□□□□□ -1.86
HERC4-213ENST00000506515 DOK1Q99704 481 aa3.41□□□□□ -1.86
HERC4-213ENST00000506515 RNF5Q99942 180 aa3.41□□□□□ -1.86
HERC4-213ENST00000506515 GGTLC1Q9BX51 225 aa3.41□□□□□ -1.86
HERC4-213ENST00000506515 SAMD10Q9BYL1 202 aa3.41□□□□□ -1.86
HERC4-213ENST00000506515 CRLF2Q9HC73 371 aa3.41□□□□□ -1.86
HERC4-213ENST00000506515 RPRD1BQ9NQG5 326 aaKnown RBP3.41□□□□□ -1.86
HERC4-213ENST00000506515 TUBG2Q9NRH3 451 aa3.41□□□□□ -1.86
HERC4-213ENST00000506515 ZMAT5Q9UDW3 170 aaKnown RBP3.41□□□□□ -1.86
HERC4-213ENST00000506515 HDGFL3Q9Y3E1 203 aa3.41□□□□□ -1.86
HERC4-213ENST00000506515 IGHV3OR16-9A0A0B4J2B5 98 aa3.4□□□□□ -1.87
HERC4-213ENST00000506515 M0R233 179 aa3.4□□□□□ -1.87
HERC4-213ENST00000506515 SMIM24O75264 130 aa3.4□□□□□ -1.87
HERC4-213ENST00000506515 GLAP06280 429 aa3.4□□□□□ -1.87
HERC4-213ENST00000506515 RAB5AP20339 215 aa3.4□□□□□ -1.87
HERC4-213ENST00000506515 PTNP21246 168 aa3.4□□□□□ -1.87
HERC4-213ENST00000506515 MYL9P24844 172 aa3.4□□□□□ -1.87
HERC4-213ENST00000506515 CLDN8P56748 225 aa3.4□□□□□ -1.87
HERC4-213ENST00000506515 SLC35A1P78382 337 aa3.4□□□□□ -1.87
HERC4-213ENST00000506515 TAF9Q16594 264 aa3.4□□□□□ -1.87
HERC4-213ENST00000506515 PLPPR5Q32ZL2 321 aa3.4□□□□□ -1.87
HERC4-213ENST00000506515 RIBC1Q8N443 379 aaPredicted RBP3.4□□□□□ -1.87
HERC4-213ENST00000506515 NECAP1Q8NC96 275 aa3.4□□□□□ -1.87
HERC4-213ENST00000506515 OR10W1Q8NGF6 305 aa3.4□□□□□ -1.87
HERC4-213ENST00000506515 OR5M1Q8NGP8 315 aa3.4□□□□□ -1.87
HERC4-213ENST00000506515 TMIGD2Q96BF3 282 aa3.4□□□□□ -1.87
HERC4-213ENST00000506515 STACQ99469 402 aa3.4□□□□□ -1.87
HERC4-213ENST00000506515 TMEM243Q9BU79 118 aa3.4□□□□□ -1.87
HERC4-213ENST00000506515 RRAGDQ9NQL2 400 aaPredicted RBP3.4□□□□□ -1.87
HERC4-213ENST00000506515 C8orf17Q9NRJ1 99 aa3.4□□□□□ -1.87
HERC4-213ENST00000506515 RHBDD3Q9Y3P4 386 aa3.4□□□□□ -1.87
HERC4-213ENST00000506515 KMT2CQ8NEZ4 4911 aaKnown RBP3.4□□□□□ -1.87
HERC4-213ENST00000506515 ARPC4-TTLL3A0A0A6YYG9 625 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 CLPSL1A2RUU4 121 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 hCG_2039718K7EN88 272 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 HSBP1O75506 76 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 PTHP01270 115 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 HLA-DQB1P01920 261 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 CBR1P16152 277 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 BMI1P35226 326 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 GLRXP35754 106 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 GGT2P36268 569 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 EMX1Q04741 257 aaPredicted RBP3.39□□□□□ -1.87
HERC4-213ENST00000506515 NAB1Q13506 487 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 GNA13Q14344 377 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 TRIP13Q15645 432 aaPredicted RBP3.39□□□□□ -1.87
HERC4-213ENST00000506515 TTMPQ5BVD1 217 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 AP1ARQ63HQ0 302 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 WDR82Q6UXN9 313 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 COMMD6Q7Z4G1 85 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 DPPA2Q7Z7J5 298 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 ZNF561Q8N587 486 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 TMEM86BQ8N661 226 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 ZDHHC22Q8N966 263 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 SPERTQ8NA61 448 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 OR9A2Q8NGT5 310 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 DOK4Q8TEW6 326 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 DDIT4LQ96D03 193 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 RSG1Q9BU20 258 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 C1QTNF6Q9BXI9 259 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 NAA50Q9GZZ1 169 aaKnown RBP3.39□□□□□ -1.87
HERC4-213ENST00000506515 CENPHQ9H3R5 247 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 C1orf198Q9H425 327 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 ENOPH1Q9UHY7 261 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 COMMD3-BMI1R4GMX3 469 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 DOCK11Q5JSL3 2073 aa3.39□□□□□ -1.87
HERC4-213ENST00000506515 CLDN25C9JDP6 229 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 ATP6V1G2-DDX39BF2Z307 99 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 UPK1AO00322 258 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 SLC16A7O60669 478 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 MPDU1O75352 247 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 FARS2O95363 451 aaKnown RBP3.38□□□□□ -1.87
HERC4-213ENST00000506515 OR12D1P0DN82 309 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 POLR2IP36954 125 aaKnown RBP3.38□□□□□ -1.87
HERC4-213ENST00000506515 C2orf80Q0P641 193 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 RNASE13Q5GAN3 156 aaKnown RBP3.38□□□□□ -1.87
HERC4-213ENST00000506515 STEAP4Q687X5 459 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 LRRN1Q6UXK5 716 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 SPICQ8N5J4 248 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 ZNF645Q8N7E2 425 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 WDR31Q8NA23 367 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 UBAC2Q8NBM4 344 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 ATP6V1C2Q8NEY4 427 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 PROKR2Q8NFJ6 384 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 CLDND2Q8NHS1 167 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 ZNF563Q8TA94 476 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 RAB8BQ92930 207 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 SCGB3A2Q96PL1 93 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 GPR22Q99680 433 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 TAPBPLQ9BX59 468 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 SLC19A3Q9BZV2 496 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 GUCA1BQ9UMX6 200 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 SLC35A3Q9Y2D2 325 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 RNF11Q9Y3C5 154 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 DSPPQ9NZW4 1301 aa3.38□□□□□ -1.87
HERC4-213ENST00000506515 PRKDCP78527 4128 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms